Analyze Diet

Topic:DNA

DNA in horses refers to the genetic material that carries the hereditary information necessary for the growth, development, functioning, and reproduction of equine species. It consists of sequences of nucleotides that encode the genetic instructions used in the development and functioning of horses. DNA analysis in horses can provide insights into genetic diversity, lineage, and breed characteristics. It is also utilized in identifying genetic disorders, understanding hereditary traits, and assisting in selective breeding programs. This page compiles peer-reviewed research studies and scholarly articles that explore the structure, function, and applications of DNA analysis in equine genetics and breeding.
Restriction endonuclease DNA fingerprinting of respiratory, foetal and perinatal foal isolates of equine herpesvirus type 1.
Archives of virology    January 1, 1983   Volume 77, Issue 2-4 249-258 doi: 10.1007/BF01309272
Studdert MJ.DNA was prepared from 43 equine herpesvirus type 1 (EHV 1) isolates, 11 of which were from horses with respiratory disease, 22 from aborted equine foetuses, and 10 from foals that died perinatally. The restriction endonuclease DNA fingerprints of 10 of the 11 respiratory isolates, known with certainty to have been recovered from horses with respiratory disease, were entirely different from all but 3 of the 32 foetal or perinatal foal isolates. The exceptional respiratory isolate, EHV 1 Army 183, had a foetal (F) strain fingerprint but this virus cannot be said with certainty to have been isola...
Resonance-enhanced Raman identification of a ternary chemical intermediate during the equine liver alcohol dehydrogenase reduction of p-(dimethylamino)benzaldehyde.
Biochemistry    April 27, 1982   Volume 21, Issue 9 2193-2202 doi: 10.1021/bi00538a031
Jagodzinski PW, Funk GF, Peticolas WL.The nature of the binding of aromatic aldehyde and aromatic alcohol substrates to the catalytic zinc of equine liver alcohol dehydrogenase has been studied by using resonance-enhanced Raman spectroscopy. When an excess of both enzyme and coenzyme to substrate is used, a stable ternary chemical intermediate is formed between liver alcohol dehydrogenase and the reduced coenzyme, nicotinamide adenine dinucleotide, and the aldehyde, p-(dimethylamino)benzaldehyde, in the pH range 8.5-0.6. Resonance-enhanced Raman spectra clearly show that this same intermediate is formed between the excess enzyme, ...
Persistent infection by equine infectious anemia virus: asymmetry of nucleotide sequence reiteration in the integrated provirus of persistently infected cells.
Virology    April 15, 1982   Volume 118, Issue 1 246-253 doi: 10.1016/0042-6822(82)90340-3
Cheevers WP, Watson SG, Klevjer-Anderson P.No abstract available
Cytogenetic and DNA analyses of equine abortion.
Cytogenetics and cell genetics    January 1, 1982   Volume 34, Issue 3 204-214 doi: 10.1159/000131808
Haynes SE, Reisner AH.Although no major structural or numerical abnormalities were found in the karyotypes of 12 aborted equine fetuses, two unrelated abortuses each carried a large polymorphism for the amount of heterochromatin in chromosome 1. In both karyotypes this chromosome was shown to be larger than its homolog. To determine the nature of the extra DNA in these chromosomes, equine DNA was isolated and characterized by buoyant density analysis. Equine mainband DNA had a buoyant density in neutral CsCl of 1.699 g/cm3, while the highly repetitive (dG+dC)-rich fraction had a buoyant density of 1.715 g/cm3. A ra...
Analysis of the genome of equine herpesvirus type 1: arrangement of cleavage sites for restriction endonucleases EcoRI, BglII and BamHI.
The Journal of general virology    December 1, 1981   Volume 57, Issue Pt 2 307-323 doi: 10.1099/0022-1317-57-2-307
Whalley JM, Robertson GR, Davison AJ.The genome of an Australian isolate of equine herpesvirus type 1 (equine abortion virus) has been analysed using the restriction endonucleases EcoRI, BglII and BamHI, and a physical map constructed. Terminal fragments were identified by exonuclease treatments, and linkage of fragments was deduced by a combination of single- and double-digest experiments and cross-blot hybridizations. The genome has a mol. wt. of 100 x 10(6) and is comprised of a short unique region bounded by repetitive sequences, which is present in both orientations in approximately equal amounts in the DNA population, and a...
Molecular cloning of equine herpesvirus type 1 DNA: analysis of standard and defective viral genomes and viral sequences in oncogenically transformed cells.
Proceedings of the National Academy of Sciences of the United States of America    November 1, 1981   Volume 78, Issue 11 6684-6688 doi: 10.1073/pnas.78.11.6684
Robinson RA, Tucker PW, Dauenhauer SA, O'Callaghan DJ.Genomic DNA sequences of equine herpesvirus type 1 (EHV-1) have been cloned as BamHI and EcoRI restriction fragments into the plasmid pBR322 and propagated in Escherichia coli. With the exception of two EcoRI restriction fragments that reside in the S region of the viral genome, all of the cloned fragments demonstrated the same electrophoretic mobilities, restriction cleavage sites, and blot-hybridization patterns as did the parent fragments produced by BamHI or EcoRI digestion of virion DNA. The EcoRI J fragment and the BamHI E fragment of the L-region terminus were cloned after the addition ...
Differentiation of respiratory and abortigenic isolates of equine herpesvirus 1 by restriction endonucleases.
Science (New York, N.Y.)    October 30, 1981   Volume 214, Issue 4520 562-564 doi: 10.1126/science.6270790
Studdert MJ, Simpson T, Roizman B.Viruses classified by immunologic criteria as equine herpesvirus 1 cause respiratory disease and abortion in horses. Restriction endonuclease analyses of the DNA's of viruses from animals with respiratory disease and from aborted fetuses show that the patterns for respiratory viruses, while similar to each other, are entirely different from the patterns for fetal viruses. It is therefore proposed that the DNA restriction endonuclease patterns of fetal and respiratory viruses analyzed in this study be designated as prototypic of equine herpesvirus 1 and 4, respectively.
Antigenic and structural conservation of herpesvirus DNA-binding proteins.
The Journal of general virology    October 1, 1981   Volume 56, Issue Pt 2 409-419 doi: 10.1099/0022-1317-56-2-409
Littler E, Yeo J, Killington RA, Purifoy DJ, Powell KL.Previously, we have shown a common antigen of several herpesviruses (pseudorabies virus, equine abortion virus and bovine mammillitis virus) to be antigenically related to the major DNA-binding proteins of herpes simplex virus types 1 and 2. In this study we have purified the cross-reacting polypeptide from cells infected with pseudorabies virus, equine abortion virus and bovine mammillitis virus and shown the cross-reacting protein to be a major DNA-binding protein for each virus. Tryptic peptide analysis of the cross-reacting DNA-binding proteins of all five viruses has shown structural simi...
Equine cytomegalovirus: cultural characteristics and properties of viral DNA.
Virology    February 1, 1981   Volume 109, Issue 1 106-119 doi: 10.1016/0042-6822(81)90475-x
Wharton JH, Henry BE, O'Callaghan DJ.No abstract available
Equine connective tissue tumors contain unintegrated bovine papilloma virus DNA.
Journal of virology    September 1, 1980   Volume 35, Issue 3 962-964 doi: 10.1128/JVI.35.3.962-964.1980
Amtmann E, Müller H, Sauer G.Bovine papilloma virus (BPV) appears to be the etiological agent of common equine connective tissue tumors. We investigated the physical state of the viral DNA within such tumors and found no indication for integration into the host genome. The BPV genomes were present as free circular episomes. Two equine sarcoids were shown to contain multiple copies of free circular BPV type 1 (BPV-1) DNA. When the tumors were digested with several single-cut restriction enzymes, there were only form III BPV-1 DNA sequences could be revealed. One of the sarcoids contained, apart from wild-type BPV-1 DNA, a ...
Evolutionary conservation of equine gc alleles and of Mammalian gc/albumin linkage.
Genetics    August 1, 1979   Volume 92, Issue 4 1347-1354 doi: 10.1093/genetics/92.4.1347
Weitkamp LR, Allen PZ.Ancient origin of the equine vitamin D binding protein (Gc) polymorphism is suggested by the finding of two alleles, Gc(F) and Gc(S), in each of three equine subgenera, Equus, Asinus and Hippotigris. The equine Gc and albumin loci are closely linked (lod score = 6). Although no recombinants were observed, the data are not inconsistent with a map distance similar to the 2 centimorgans reported for the human albumin/Gc linkage relationship. Gametic association between the Gc(F) and Alb(F) alleles appears probable in the American Standardbred horse, perhaps as a result of population structure. Si...
Molecular cytogenetics of the Equidae. I. Purification and cytological localization of a (G + C)-rich satellite DNA from Equus przewalskii.
Chromosoma    April 30, 1979   Volume 72, Issue 2 115-129 doi: 10.1007/BF00293229
Ryder OA, Hansen SK.A (G + C)-rich density satellite DNA (rho = 1.713 gm/cc) has been purified from splenic DNA of Przewalski's horse, Equus przewalskii, by successive equilibrium density gradient centrifugations. The purified satellite, which may comprise as much as 29% of the total DNA, renatures rapidly; however, analyses of native, single-stranded, and reassociated molecules by analytical ultracentrifugation and melting properties suggest that some sequence heterogeniety exists in the 1.713 gm/cc satellite. Complementary RNA (cRNA) transcribed from satellite DNA has been utilized for in situ hybridization stu...
Synthesis of long complementary DNA in the endogenous reaction by equine infectious anemia virus.
Journal of virology    March 1, 1979   Volume 29, Issue 3 907-914 doi: 10.1128/JVI.29.3.907-914.1979
Rice NR, Coggins L.In the endogenous reverse transcriptase reaction, equine infectious anemia virus is able to synthesize complementary DNA (cDNA) of 8,000 nucleotides in high yield. After 2 h in 50 muM dNTP, about 2.8 mug of cDNA per mg of protein is produced, almost 30% of which is long cDNA. The system thus compares favorably with the other two well-characterized endogenous reaction systems, Moloney murine leukemia virus and avian sarcoma virus. Elongation rates of 100 to 150 nucleotides per min have been observed; these rates are comparable to those seen with purified avian myeloblastosis virus reverse trans...
DNases in milk and blood sera from different species.
Acta veterinaria Scandinavica    January 1, 1979   Volume 20, Issue 3 404-416 doi: 10.1186/BF03546602
Gudding R.DNases were demonstrated in samples of colostrum and blood serum from man and various domestic animals. The measurable DNase activity recorded was highest in samples from cat and dog and lowest in samples from goat, horse, pig and sheep. In contrast to DNases produced by certain bacteria, these enzymes were thermo-labile and the activity was maximal in the area pH 5.0–5.5. A modification of an agar medium originally described for the demonstration of bacterial DNases was found to be suitable for assays of DNases from colostrum, milk and serum. DNaser ble påvist i prøver fra kolostrum og bl...
Hybridization of bovine papilloma virus type 1 and type 2 DNA to DNA from virus-induced hamster tumors and naturally occurring equine tumors.
Intervirology    January 1, 1979   Volume 11, Issue 4 227-233 doi: 10.1159/000149038
Lancaster WD, Theilen GH, Olson C.DNAs from bovine papilloma virus(BPV)-induced hamster tumors and from equine connective tissue tumors of unknown etiology were examined for BPV DNA sequences by molecular hybridization. DNA from two distinct classes of BPV (type 1 and type 2) was labeled in vitro and used as probes. Analysis of DNA-DNA reassociation kinetics indicated that both virus types were capable of tumor induction in the hamster. DNA isolated from 6 of 7 equine tumors accelerated the reassociation of the BPV DNA probes. BPV type 1 or type 2 DNA hybridized extensively to DNA from 3 tumors, while 3 other tumors contained ...
Analysis of mechanisms regulating the expression of parental alleles at the GPD locus in mule erythrocytes.
Biochemical genetics    June 1, 1978   Volume 16, Issue 5-6 379-386 doi: 10.1007/BF00484205
Serov OL, Zakijan SM, Kulichkov VA.Erythrocyte glucose-6-phosphate dehydrogenase (G6PD) was examined by 13% starch gel electrophoresis in 74 mules (42 females and 32 males), 35 donkeys, and ten horses. The quantitative expression of the parental alleles at the Gpd locus varies greatly in female mules from the hemizygous expression of the maternal allele to that of the paternal. The data obtained indicate that the X chromosomes are randomly inactivated in females mules. No selective advantage of a cell population with a maternally (or paternally) derived X active was found in female mule erythrocytes. It is suggested that the ph...
Detection of proviral DNA in horse cells infected with equine infectious anemia virus.
Journal of virology    June 1, 1978   Volume 26, Issue 3 577-583 doi: 10.1128/JVI.26.3.577-583.1978
Rice NR, Simek S, Ryder OA, Coggins L.Equine infectious anemia virus (EIAV) recently has been shown to possess a high-molecular-weight RNA genome and a virion reverse transcriptase. We completed the demonstration that EIAV is a retrovirus by showing the presence of proviral DNA in equine cells infected in vitro, but not in normal horse DNA. These studies were performed by using a highly representative cDNA probe synthesized by the virion polymerase. It was found that this cDNA reassociated extensively, and with high thermal stability, with either viral RNA or DNA extracted from infected cells, but showed no detectable reassociatio...
Replication of equine herpesvirus type 1 and type 3: resistance to hydroxyurea and thymidine.
Intervirology    January 1, 1978   Volume 9, Issue 5 276-285 doi: 10.1159/000148945
Allen GP, Cohen JC, Randall CC, O'Callaghan DJ.The replication of equine herpesvirus type 1 (EHV-1) and type 3 (EHV-3) was unimpeded in three different cell types-equine epithelial cells, equine fibroblasts, and mouse fibroblasts-which had been blocked in their capacity to synthesize host DNA by 2.5 mM hydroxyurea (HU) or 2 mM thymidine (TdR). The rate of DNA synthesis in uninfected or equine herpesvirus-infected cells in the presence of HU or TdR was measured by pulse-labeling cell samples with a labeled DNA precursor at different times after infection. DNA synthesis in uninfected cultures was completely inhibited by both compounds. Howev...
Probing DNA quaternary ordering with circular dichroism spectroscopy: studies of equine sperm chromosomal fibers.
Biopolymers    March 1, 1977   Volume 16, Issue 3 573-582 doi: 10.1002/bip.1977.360160308
Sipski ML, Wagner TE.No abstract available
Bovine papilloma virus: presence of virus-specific DNA sequences in naturally occurring equine tumors.
Proceedings of the National Academy of Sciences of the United States of America    February 1, 1977   Volume 74, Issue 2 524-528 doi: 10.1073/pnas.74.2.524
Lancaster WD, Olson C, Meinke W.Four of five spontaneous benign equine connective tissue tumors of unknown etiology and a bovine papilloma virus (BPV)-induced equine tumor contained BPV-specific DNA sequences as determined by DNA-DNA hybridization of DNA from tumors with BPV DNA labeled in vitro. Analysis of the kinetics of reassociation indicated that 20-75% of the BPV genome was present in the various tumors. The number of partial BPV genome equivalents ranged from 60 to 500 copies per diploid quantity of cellular DNA. Thermal denaturation profiles of duplexes formed between labeled BPV DNA and DNA from tumor cells indicat...
[Mechanisms for the expression of parental alleles of the Gpd locus in mule erythrocytes].
Genetika    January 1, 1977   Volume 13, Issue 10 1761-1766 
Serov OL, Zakiian SM, Kulichkov VA.No abstract available
Purification and characterization of equine herpesvirus-induced DNA.
Virology    January 1, 1977   Volume 76, Issue 1 395-408 doi: 10.1016/0042-6822(77)90311-7
Allen GP, O'Callaghan DJ, Randall CC.Infection of cells with equine herpesvirus type 1 (EHV-1) or type 3 (EHV-3) resulted in the induction of a DNA polymerase activity distinguishable from host cell DNA polymerases by its high salt requirement for maximal activity. By column chromatography on DEAE-cellulose, DNA-cellulose, phosphocellulose, and hydroxyapatite, the EHV-1-induced polymerase was purified 500-fold with 1–2% recovery of total activity from the nuclei of infected hamster livers. The final enzyme preparation was homogeneous as judged by electrophoresis in sodium dodecyl sulfate-polyacrylamide gels. Calculations based ...
Comparison of serum DNA, native DNA-binding and deoxyribonuclease levels in ten animal species and man.
Life sciences    November 15, 1976   Volume 19, Issue 10 1609-1614 doi: 10.1016/0024-3205(76)90108-9
Cox RA, Gokcen M.No abstract available
Phenotype of mammalian spermatozoa in relation to genetic content.
Indian journal of experimental biology    September 1, 1976   Volume 14, Issue 5 610-611 
Bhattacharya BC, Gunther AH, Enos HL, Evans BM, Ghosh CR.No abstract available
The future use of cytogenetics in the manipulation of domestic animal populations.
New Zealand veterinary journal    December 1, 1975   Volume 23, Issue 12 295-298 doi: 10.1080/00480169.1975.34263
Bruere AN.No abstract available
Isolation and characterization of an adenovirus and isolation of its adenovirus-associated virus in cell culture from foals with respiratory tract disease.
American journal of veterinary research    March 1, 1975   Volume 36, Issue 3 247-250 
Dutta SK.An adenovirus was isolated from a foal with respiratory tract disease. The virus produced cytopathic effects (CPE) in equine embryo kidney (EEK) cell culture, contained deoxyribonucleic acid (DNA), was resistant to chloroform and pH 3, and was moderately resistant to heat. The virus caused hemagglutination of human (type O) erythrocytes. Viral density was 1.34 g/cm,3 and diameter was 75 nm. An adenovirus-associated virus (AAV) isolated from the infected cell culture was 22 nm in diameter. These viruses are classified as equine adenovirus and equine AAV.
Linkage between the K blood group locus and the 6-PGD locus in horses.
Animal blood groups and biochemical genetics    January 1, 1974   Volume 5, Issue 3 137-141 doi: 10.1111/j.1365-2052.1974.tb01323.x
Sandberg K.No abstract available
Equine herpesviruses: antigenic relationships and deoxyribonucleic acid densities.
Infection and immunity    October 1, 1973   Volume 8, Issue 4 621-627 doi: 10.1128/iai.8.4.621-627.1973
Plummer G, Goodheart CR, Studdert MJ.Equine herpesviruses with a deoxyribonucleic acid density of 1.716 to 1.717 g/cm(3) were compared with one another by the plaque-reduction test and by the rate of development of cytopathic effect as indicated by plaque size in rabbit kidney cultures. Of the 19 isolates studied, the 9 which had already been tentatively labeled equine abortion viruses were serologically similar to one another; each of them grew more quickly than did any of the other 10 isolates although the mean plaque sizes formed a series of gradations with no clear hiatus which would permit the unequivocal delineation of the ...
A DNA-binding protein in the serum of certain mammalian species.
Proceedings of the National Academy of Sciences of the United States of America    November 1, 1972   Volume 69, Issue 11 3327-3330 doi: 10.1073/pnas.69.11.3327
Thoburn R, Hurvitz AI, Kunkel HG.Various mammalian species contain an anionic serum protein that reacts specifically with native DNA. It is considerably less reactive with single-strand DNA and does not react with monodeoxyribonucleotides, homopolyribonucleotides, or duplexes of homopolyribonucleotides. Synthetic dA.dT was an effective inhibitor of the reaction with native DNA, while Micrococcus luteus DNA and dG.dC were not inhibitory. This protein was encountered in the course of studies on DNA antibodies. Although it reacted with red cells coated with DNA and gave agar precipitation bands, it was clearly distinct from DNA ...
Further proof of genetic inactivation of the X chromosome in the female mule.
Nature    June 16, 1972   Volume 237, Issue 5355 393-396 doi: 10.1038/237393a0
Rattazzi MG, Cohen MM.No abstract available