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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Possible negative effects of inbreeding on semen quality in Shetland pony stallions.
Theriogenology    September 13, 2005   Volume 65, Issue 6 1159-1170 doi: 10.1016/j.theriogenology.2005.08.001
van Eldik P, van der Waaij EH, Ducro B, Kooper AW, Stout TA, Colenbrander B.Inbreeding is widely believed to negatively affect reproductive performance. Indeed, in some species, high levels of inbreeding are thought to be the major cause of poor semen quality. It is, however, not clear whether inbreeding affects fertility in horses. In this study, the relationship between inbreeding and semen quality was examined in 285 immature Shetland pony stallions submitted for breeding soundness examination in March-April of the years 1992-1997. The majority of stallions examined were 3 years old (85%) and their coefficients of inbreeding ranged from 0 to 25% (mean+/-S.D.: 3+/-4...
Association between equine temperament and polymorphisms in dopamine D4 receptor gene.
Mammalian genome : official journal of the International Mammalian Genome Society    September 10, 2005   Volume 16, Issue 7 538-544 doi: 10.1007/s00335-005-0021-3
Momozawa Y, Takeuchi Y, Kusunose R, Kikusui T, Mori Y.The variable number of tandem repeats (VNTR) polymorphism of the dopamine D4 receptor (DRD4) gene has been reported to be associated with the personality trait of novelty-seeking in humans. In the genus Equus, this region includes an 18-bp repeat unit and there are inter- and intraspecies differences in the number of repetitions. Because horses are unique among livestock species in that their temperament is considered important, we investigated the possible role of this region on equine temperament in thoroughbred horses. We simultaneously determined the sequences of this polymorphic region an...
Effect of oestrous-cycle stage on the response of mares in a novel object test and isolation test.
Reproduction in domestic animals = Zuchthygiene    September 10, 2005   Volume 40, Issue 5 480-488 doi: 10.1111/j.1439-0531.2005.00611.x
Hedberg Y, Dalin AM, Ohagen P, Holm KR, Kindahl H.In various species, sex, hormonal treatments and oestrous-cycle stage have been shown to affect the animal's response in behavioural tests. Few such studies have been performed in the horse. The main aim of the present study was to investigate whether oestrous-cycle stage affects mares' response to a novel object test and isolation test and, in part, to study whether mares, assumed to suffer from oestrous-related behavioural problems, respond differently in these tests when compared with controls. Twelve mares were tested twice, in oestrus and dioestrus, in a crossover design. Seven behavioura...
Nucleotide sequence of complementary DNA encoding for quaking protein of cow, horse and pig.
DNA sequence : the journal of DNA sequencing and mapping    September 9, 2005   Volume 16, Issue 4 300-303 doi: 10.1080/10425170500136731
Murata T, Yamashiro Y, Kondo T, Nakaichi M, Une S, Taura Y.Complementary DNA (cDNA) for bovine quaking gene (Bqk), equine quaking gene (Eqk) and porcine quaking gene (Pqk), which are homologous to mouse quaking gene (qkI), were isolated, and their nucleotide sequences were determined. cDNA sequences of Bqk, Eqk and Pqk showed very high homology to that of qkI at nucleotide level; 94.2, 95.7 and 95.6%, respectively. Deduced amino acid sequences for Bqk, Eqk and Pqk perfectly matched to that of qkI. These findings suggest that the quaking gene family is highly conserved during mammalian evolution, and that Bqk, Eqk and Pqk are likely to have important b...
Polymorphic study of equine antiviral MXA gene.
Biochemical genetics    September 8, 2005   Volume 43, Issue 5-6 299-305 doi: 10.1007/s10528-005-5221-8
Ju LH, Onogi A, Ueda J, Yamada K, Nakatsu Y, Ohe M, Hata H, Sasaki K, Watanabe T.No abstract available
Phase and size variable surface-exposed proteins in equine genital mycoplasmas.
Veterinary microbiology    September 7, 2005   Volume 110, Issue 3-4 301-306 doi: 10.1016/j.vetmic.2005.08.002
Tortschanoff M, Aurich C, Rosengarten R, Spergser J.Mycoplasma equigenitalium and Mycoplasma subdolum have been associated with infertility, endometritis, vulvitis and abortions in mares, and with reduced fertility and balanoposthitis in stallions. Despite their role in equine genital disorder, determinants of virulence and pathogenesis as well as factors provoking specific host immune responses have not been identified, so far. To establish the major immunogenic components of Mycoplasma (M.) equigenitalium and M. subdolum, antigen profiles of their type strains as well as 30 clinical isolates were compared by SDS-PAGE and immunoblot analysis u...
The sperm chromatin structure assay: a review of clinical applications.
Animal reproduction science    September 6, 2005   Volume 89, Issue 1-4 39-45 doi: 10.1016/j.anireprosci.2005.06.019
Love CC.The sperm chromatin structure assay (SCSA) was introduced by as a method to determine the susceptibility of sperm DNA to denaturation and how those results related to fertility. This initial study used human sperm and was followed by studies in bulls and boars . This assay was one of the first to introduce the technique of flow cytometry, which has the ability to evaluate specific sperm compartments of large numbers of sperm in a short time, as a methodology to evaluate sperm quality and further define the relationship of sperm quality to fertility. For any assay to be of use clinically, it mu...
The influence of 1-10 kD fraction from brains of the hibernating ground squirrel and the Yakut horse on proliferation and protein synthesizing system of Ehrlich ascitic carcinoma cells.
Cryo letters    September 1, 2005   Volume 26, Issue 5 279-288 
Gulevsky AK, Grischenko VI, Tereschenko OS, Shchenyavcky IJ.The experimental data presented in the work testify to the cytostatic activity of 1-10 kD polypeptide fractions from brains of the hibernating ground squirrel and the Yakut horse towards Ehrlich ascitic carcinoma (EAC) cells. The experiments on the investigation of the inhibiting influence of 1-10 kD fractions from tissues of the hibernating and cold-adapted animals on protein-synthesizing system of EAC cells allow us to conclude that the cytostatic effect of the fractions is effected at the genetic level in the tumor cells.
Sex reversal syndrome (64,XY; SRY-positive) in a mare demonstrating masculine behaviour.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    September 1, 2005   Volume 122 Suppl 1 60-63 doi: 10.1111/j.1439-0388.2005.00510.x
Switonski M, Chmurzynska A, Szczerbal I, Lipczynski A, Yang F, Nowicka-Posłuszna A.A 5-year-old Thoroughbred mare was subjected to cytogenetic and molecular analysis because of infertility and masculine behaviour. Chromosome studies, including painting with the whole X chromosome specific probe, revealed a male chromosome complement (64,XY). The PCR amplification of the SRY and ZFY genes showed the presence of both those genes, while the endocrinological study demonstrated a high level of testosterone (9.7 nmol/l). Sequencing of the SRY gene (1121 bp), comprising also 5'- and 3'-UTRs, did not reveal any differences when compared with the sequence of normal stallions. It was ...
Major histocompatibility complex locus DRA polymorphism in the endangered Sorraia horse and related breeds.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    September 1, 2005   Volume 122, Issue 1 69-72 doi: 10.1111/j.1439-0388.2004.00485.x
Luís C, Cothran EG, Oom MM, Bailey E.The major histocompatibility complex (MHC) genes play well-defined roles in eliciting immune responses and combating infectious diseases. This genetic system is among the most polymorphic. The extent of genetic variation within a population has been directly correlated with fitness for many traits. The MHC class II locus DRA polymorphism was analysed in the endangered Sorraia horse, two other Portuguese and four New World horse breeds considered to be historically close to the Sorraia. Comparison of the Sorraia with other breeds demonstrated less MHC variation among Sorraia horses. If DRA poly...
Comparative chromosomal studies of E. caballus (ECA) and E. przewalskii (EPR) in a female F1 hybrid.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    September 1, 2005   Volume 122 Suppl 1 97-102 doi: 10.1111/j.1439-0388.2005.00494.x
Ahrens E, Stranzinger G.Previous research revealed that the karyotypes of Equus przewalskii (2n = 66) and Equus caballus (2n = 64) differ by one pair of metacentric chromosomes, present in ECA but not in EPR, and two pairs of acrocentric chromosomes found only in the EPR karyotype. The formation of a trivalent during meiosis in a male F1 hybrid and the homologies in G-banding patterns suggest that ECA 5 corresponds to two acrocentric EPR chromosomes resulting from a Robertsonian fusion or fission event. Chromosomal investigations of a female interspecies F1 hybrid including banded karyograms and fluorescence in situ ...
The role of stallion seminal proteins in fertilisation.
Animal reproduction science    August 30, 2005   Volume 89, Issue 1-4 159-170 doi: 10.1016/j.anireprosci.2005.06.018
Töpfer-Petersen E, Ekhlasi-Hundrieser M, Kirchhoff C, Leeb T, Sieme H.Seminal plasma proteins are secretory proteins originating mainly from the epididymis and the accessory sex glands. They are involved in the remodelling of the sperm surface which occurs during sperm transit through the male genital tract and continues later at ejaculation. During this process, collectively called post-testicular sperm maturation, the spermatozoa acquire the ability to fertilise an egg. Seminal plasma proteins have been shown to contribute to early and central steps of the fertilisation sequence, e.g. the establishment of the oviductal sperm reservoir, modulation of capacitati...
Systemic concentrations of hormones during the development of follicular waves in mares and women: a comparative study.
Reproduction (Cambridge, England)    August 27, 2005   Volume 130, Issue 3 379-388 doi: 10.1530/rep.1.00757
Ginther OJ, Beg MA, Gastal EL, Gastal MO, Baerwald AR, Pierson RA.Changes in systemic concentrations of FSH, LH, oestradiol and progesterone during the ovulatory follicular wave were compared between 30 mares and 30 women. Based on a previous study, the emergence of the future ovulatory follicle was defined as occurring at 13.0 mm in mares and 6.0 mm in women, and deviation in diameter between the two largest follicles was expected to begin at 22.7 mm in mares and 10.3 mm in women. Mean FSH concentrations were high in mares during the luteal phase, resulting from statistically identified FSH surges occurring in individuals on different days and in different ...
Horses for courses.
British journal of sports medicine    August 25, 2005   Volume 39, Issue 9 581 
McCrory P.No abstract available
Molecular cloning and characterization of markers and cytokines for equid myeloid cells.
Veterinary immunology and immunopathology    August 23, 2005   Volume 108, Issue 1-2 227-236 doi: 10.1016/j.vetimm.2005.07.015
Steinbach F, Stark R, Ibrahim S, Gawad EA, Ludwig H, Walter J, Commandeur U, Mauel S.The myeloid cell system comprises of monocytes, macrophages (MPhi), dendritic cells (DC), Kupffer cells, osteoclasts or microglia and is also known as the mononuclear phagocytic system (MPS). Essential cytokines to differentiate or activate these cells include GM-CSF or IL-4. Important markers for characterization include CD1, CD14, CD68, CD163 and CD206. All these markers, however, were not cloned or further characterized in equids by use of monoclonal antibodies earlier. To overcome this problem with the present study, two approaches were used. First, we cloned equine cytokines and markers, ...
Genetic variation of Polish endangered Biłgoraj horses and two common horse breeds in microsatellite loci.
Journal of applied genetics    August 20, 2005   Volume 46, Issue 3 299-305 
Zabek T, Nogaj A, Radko A, Nogaj J, Słota E.Genetic variation of endangered Biłgoraj horses and two common Polish horse breeds was compared with the use of 12 microsatellite loci (AHT4, AHT5, ASB2, HMS2, HMS3, HMS6, HMS7, HTG4, HTG6, HTG7, HTG10, VHL20). Lower allelic diversity was detected in all investigated populations in comparison to other studies. Large differences in the frequencies of microsatellite alleles between Biłgoraj horses and two other horse breeds were discovered. In all polymorphic loci all investigated breeds were in the Hardy-Weinberg equilibrium. Mean Fis values and the results of a test for the presence of a rec...
Antibodies and PMBC from EIAV infected carrier horses recognize gp45 and p26 synthetic peptides.
Veterinary immunology and immunopathology    August 18, 2005   Volume 108, Issue 3-4 335-343 doi: 10.1016/j.vetimm.2005.06.007
Soutullo A, García MI, Bailat A, Racca A, Tonarelli G, Malan Borel I.Equine infectious anemia virus (EIAV) is a lentivirus causing a persistent infection in horses characterized by recurrent febrile episodes and high levels of viremia associated with a novel antigenic strain of the virus. The virus contains two envelope glycoproteins, gp90 and gp45, and four internal proteins, p26, p15, p11 and p9. Considering that the most infected horses are able to restrict EIAV replication to very low levels and that gp45 and p26 contain highly conserved epitopes among lentiviruses, it would be necessary to identify those conserved epitopes stimulating cellular and humoral ...
Proceedings of the 4th International Symposium on Stallion Reproduction, Hannover, Germany, October 2005.
Animal reproduction science    August 17, 2005   Volume 89, Issue 1-4 1-321 doi: 10.1016/j.anireprosci.2005.07.006
No abstract available
IgA Fc receptors in cattle and horses.
Veterinary immunology and immunopathology    August 16, 2005   Volume 108, Issue 1-2 139-143 doi: 10.1016/j.vetimm.2005.07.008
Morton HC.The biological role of IgA depends, at least partly, on the interaction with specific receptors (FcalphaRs) on the surface of leukocytes. The human FcalphaR, CD89, was the first IgA Fc receptor to be identified, and binding of IgA-coated particles to CD89 triggers numerous cellular effector functions including phagocytosis, antibody-dependent cell-mediated cytotoxicity (ADCC), and release of inflammatory mediators. Recently, CD89 orthologs have been identified in a number of other species, including cows and horses. This brief review will summarize our current knowledge regarding the structure...
Phylogenetic relationships of Sarcocystis neurona of horses and opossums to other cyst-forming coccidia deduced from SSU rRNA gene sequences.
Parasitology research    August 16, 2005   Volume 97, Issue 5 345-357 doi: 10.1007/s00436-005-1396-5
Elsheikha HM, Lacher DW, Mansfield LS.Phylogenetic analyses based on sequences of the nuclear-encoded small subunit rRNA (ssurRNA) gene were performed to examine the origin, phylogeny, and biogeographic relationships of Sarcocystis neurona isolates from opossums and horses from the State of Michigan, USA, in relation to other cyst-forming coccidia. A total of 31 taxa representing all recognized subfamilies and genera of Sarcocystidae were included in the analyses with clonal isolates of two opossum and two horse S. neurona. Phylogenies obtained by the four tree-building methods were consistent with the classical taxonomy based on ...
[The issue of continuity in ancient horse medicine: the treatment of diseases of the extremities described in the Kităb al-furŭsĭya wa-l-baytara by Muhammad ibn Ya’qŭb ibn ahĭ Hizăm al-Huttulĭ].
Sudhoffs Archiv    August 13, 2005   Volume 89, Issue 1 58-95 
Weidenhöfer V, Martin H, Peters J.Since the late 9th century, scientific literature in Arabian language, based on the translation and compilation of works of the Classical, Persian and Indian culture considerably increased. This also applies to the field of veterinary medicine, as is illustrated by a number of hippological and hippiatric treatises. Affinities between texts on horse medicine in Antiquity and in Arabian literature have been mentioned by philologists, but the degree of dependence on classical texts could not be verified due to the lack of translations of the Arabian texts. In this respect, the oldest available te...
Equine FISH mapping of 36 genes known to locate on human chromosome ends.
Cytogenetic and genome research    August 12, 2005   Volume 111, Issue 1 46-50 doi: 10.1159/000085669
Perrocheau M, Boutreux V, Chadi-Taourit S, Di Meo GP, Perucatti A, Incarnato D, Cribiu EP, Guérin G, Iannuzzi L.The INRA and the CHORI-241 horse BAC libraries were screened by hybridization with DNA probes and/or directly by PCR with primers designed in consensus sequences of genes localized at the end of each human chromosome. BAC clones were retrieved and 36 could be FISH mapped after the expected gene was confirmed in each BAC by sequencing. Our results show that 16 BACs can be considered to be at telomeric or centromeric positions in the horse and 15 were found at the boundary of actually defined conserved segments even-though often located within conserved syntenic fragments between horse and human...
International Equine Gene Mapping Workshop Report: a comprehensive linkage map constructed with data from new markers and by merging four mapping resources.
Cytogenetic and genome research    August 12, 2005   Volume 111, Issue 1 5-15 doi: 10.1159/000085664
Penedo MC, Millon LV, Bernoco D, Bailey E, Binns M, Cholewinski G, Ellis N, Flynn J, Gralak B, Guthrie A, Hasegawa T, Lindgren G, Lyons LA, Røed KH....A comprehensive male linkage map was generated by adding 359 new, informative microsatellites to the International Equine Gene Map half-sibling reference families and by combining genotype data from three independent mapping resources: a full sibling family created at the Animal Health Trust in Newmarket, United Kingdom, eight half-sibling families from Sweden and two half-sibling families from the University of California, Davis. Because the combined data were derived primarily from half-sibling families, only autosomal markers were analyzed. The map was constructed from a total of 766 marker...
Biochemical and biomechanical properties of lesion and adjacent articular cartilage after chondral defect repair in an equine model.
The American journal of sports medicine    August 10, 2005   Volume 33, Issue 11 1647-1653 doi: 10.1177/0363546505275487
Strauss EJ, Goodrich LR, Chen CT, Hidaka C, Nixon AJ.Chondral defects may lead to degradative changes in the surrounding cartilage, predisposing patients to developing osteoarthritis. Objective: To quantify changes in the biomechanical and biochemical properties of the articular cartilage adjacent to chondral defects after experimental defect repair. Methods: Controlled laboratory study. Methods: Specimens were harvested from tissue within (lesion), immediately adjacent to, and at a distance from (remote area) a full-thickness cartilage defect 8 months after cartilage repair with genetically modified chondrocytes expressing insulin-like growth f...
Challenges facing sex preselection of stallion spermatozoa.
Animal reproduction science    August 9, 2005   Volume 89, Issue 1-4 147-157 doi: 10.1016/j.anireprosci.2005.06.024
Morris LH.Since the production of the first live offspring from sex-sorted spermatozoa in 1989, there have been many developments in the fluorescence-activated cell separation (FACS) procedures to preselect X- and Y-chromosome bearing spermatozoa prior to insemination. During this time, FACS technology has been applied to a range of species and has resulted in offspring from rabbits, cattle, sheep, elk and horses. In horses, satisfactory fertility rates have been achieved after hysteroscopic insemination of 20 x 10(6) fresh or stored, sex-sorted spermatozoa. However, many of the sperm processing protoco...
Alpha-melanocyte stimulating hormone release in response to thyrotropin releasing hormone in healthy horses, horses with pituitary pars intermedia dysfunction and equine pars intermedia explants.
Domestic animal endocrinology    August 9, 2005   Volume 30, Issue 4 276-288 doi: 10.1016/j.domaniend.2005.07.005
McFarlane D, Beech J, Cribb A.Thyrotropin releasing hormone (TRH) stimulates an increase in plasma cortisol in horses with pars intermedia dysfunction (PPID, Cushing's disease). A similar phenomenon is observed in humans with Cushing's disease or Nelson's syndrome. The mechanism of the response in humans is not known, but an alteration in receptor expression, selectivity or responsiveness in abnormal corticotropes has been proposed. Horses with PPID, unlike humans, almost exclusively have adenomas of pars intermedia (PI) rather than pars distalis (PD) origin. Therefore, the mechanism responsible for the TRH response observ...
Regulated expression of the beta2-toxin gene (cpb2) in Clostridium perfringens type a isolates from horses with gastrointestinal diseases.
Journal of clinical microbiology    August 6, 2005   Volume 43, Issue 8 4002-4009 doi: 10.1128/JCM.43.8.4002-4009.2005
Waters M, Raju D, Garmory HS, Popoff MR, Sarker MR.Recent epidemiological studies suggested that cpb2-positive Clostridium perfringens isolates are associated with gastrointestinal (GI) diseases in horses. These putative relationships, indicated by PCR genotyping, were tested in the present study by further genotyping and phenotyping of 23 cpb2-positive C. perfringens isolates from horses with GI disease (referred to hereafter as horse GI disease isolates). Our beta2-toxin (CPB2) Western blot analyses demonstrated that all of the tested isolates were unable to produce detectable levels of CPB2. However, Southern blot and nucleotide sequencing ...
Factors affecting the plasma membrane function of cooled-stored stallion spermatozoa.
Animal reproduction science    August 6, 2005   Volume 89, Issue 1-4 65-75 doi: 10.1016/j.anireprosci.2005.06.025
Aurich C.The spermatozoon is a highly specified cell that has the abilities of active motility and fertilization of the ovum. Damage to the sperm plasma membrane results in the irreversible loss of its functions. Because of the high content of unsaturated fatty acids in the plasma membrane, mammalian sperm are sensitive to oxidative stress. While mild peroxidation appears to promote capacitation of the sperm cell, excessive peroxidation will damage the plasma membrane and results in loss of motility and fertility. The functional integrity of the sperm plasma membrane can be determined by functional tes...
Differentiating among horse (Equus caballus), donkey (Equus asinus) and their hybrids with combined analysis of nuclear and mitochondrial gene polymorphism.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    August 3, 2005   Volume 122, Issue 4 285-288 doi: 10.1111/j.1439-0388.2005.00535.x
Zhao CJ, Han GC, Qin YH, Wu Ch.A novel and brief method of differentiating among horse (Equus caballus) and donkey (Equus asinus) and their hybrids (mule, E. asinus x E. caballus and hinny, E. caballus x E. asinus) with combined analysis of nuclear and mitochondrial gene polymorphism (CANMGP) was reported in the present report. A nuclear gene, protamine P1 gene of donkey was sequenced and compared with the known horse sequence from GenBank while a published equid mitochondrial gene, cytochrome b gene of donkey was compared with that of horse. In each of the two genes, a fixed nucleotide substitution within an exon that coul...
Estimation of genetic parameters for the prevalence of osseous fragments in limb joints of Hanoverian Warmblood horses.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    August 3, 2005   Volume 122, Issue 4 271-280 doi: 10.1111/j.1439-0388.2005.00527.x
Stock KF, Hamann H, Distl O.Genetic parameters were estimated for the prevalence of osseous fragments in distal (DIJ) and proximal interphalangeal (PIJ), fetlock (FJ) and hock joints (HJ) of Hanoverian Warmblood horses by using residual maximum likelihood (REML) with linear animal models. The analyses were based on the results of 10 standardized radiographs of all four limbs of 3725 young riding horses selected for sale at auction. Transformation factors onto the underlying liability scale were verified by a simulation study. The heritability estimates of osseous fragments on the liability scale were in the range of h2 =...