Experimental crossover study on the effects of withholding feed for 24 h on the equine faecal bacterial microbiota in healthy mares.
Abstract: An association between equine gastrointestinal disease causing colic signs and changes in faecal bacterial microbiota has been identified. The reasons for these changes and their clinical relevance has not been investigated. Withholding feed, which is an integral part of managing horses with colic, may contribute to the observed changes in the microbiota and impact interpretation of findings in horses with colic. Study objectives were, therefore, to determine the effect of withholding feed for 24 h on equine faecal bacterial microbiota in healthy mares to differentiate the effects of withholding feed from the changes potentially associated with the disease. Results: Species richness and Shannon diversity (alpha diversity) were significantly lower at the late withheld (10-24 h post withholding feed) and early refed (2-12 h post re-feeding) time points compared to samples from fed horses (P < 0.01). Restoration of species richness and diversity began to occur at the late refed (18-24 h post re-feeding) time points. Horses having feed withheld had a distinct bacterial population compared to fed horses (beta diversity). Bacteroidetes BS11 and Firmicutes Christensenellaceae, Christensenella, and Dehalobacteriaceae were significantly increased in horses withheld from feed primarily during the late withheld and early refed time points. Bacteroidetes Marinilabiaceae and Prevotellaceae, Firmicutes Veillonellaceae, Anaerovibrio, and Bulleidia, and Proteobacteria GMD14H09 were significantly decreased in horses with feed withheld at late withheld, early refed, and late refed time periods (P < 0.01). Changes in commensal gut microbiota were not significant between groups. Conclusions: Withholding feed has a significant effect on faecal bacterial microbiota diversity and composition particularly following at least 10 h of withholding feed and should be taken into consideration when interpreting data on the equine faecal bacterial microbiota in horses.
Publication Date: 2021-01-05 PubMed ID: 33402190PubMed Central: PMC7786913DOI: 10.1186/s12917-020-02706-8Google Scholar: Lookup The Equine Research Bank provides access to a large database of publicly available scientific literature. Inclusion in the Research Bank does not imply endorsement of study methods or findings by Mad Barn.
- Journal Article
- Randomized Controlled Trial
- Veterinary
Summary
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This research article investigates the effect of withholding food from horses for 24 hours and its impact on their gut bacteria. The study reveals a notable shift in bacterial diversity and composition within this time period, suggesting that such changes should be considered during horse health assessments, especially when dealing with colic.
Objective and Background
- The research was conducted to determine the impact of withholding feed for 24 hours on the faecal bacterial microbiota in healthy mares. The discussion of this topic is important as changes in the bacterial microbiota are connected to equine gastrointestinal disorders, often signified by colic symptoms.
- In medical practices for horses dealing with colic, feed withholding is a common approach. This study aimed to differentiate between the effects of this practice and changes that are potentially related to the disease itself.
Methodology and Findings
- Researchers employed an experimental crossover study to evaluate the responses of the horses’ gut microbiota to feed withholding.
- They found that species richness and Shannon diversity (indicators of bacterial diversity), were significantly lower 10 to 24 hours after food was withheld and during the first 12 hours after re-feeding, compared to those in fed horses.
- However, a restoration of such biodiversity began to occur at 18 to 24 hours post re-feeding.
- The research illustrated that horses which had feed withheld distinctively differed in terms of their bacterial population composition in comparison to those fed regularly. This indicates a significant shift in the faecal bacterial microbiota due to feed withholding.
Impacting Bacterial Groups
- Several bacterial groups had their presence significantly altered throughout the withholding and refeeding periods: Bacteroidetes BS11 and Firmicutes Christensenellaceae, Christensenella, and Dehalobacteriaceae increased, and Bacteroidetes Marinilabiaceae and Prevotellaceae, Firmicutes Veillonellaceae, Anaerovibrio, and Bulleidia, and Proteobacteria GMD14H09 showed a decrease.
- Notably, however, the changes in commensal gut microbiota, which are the bacteria that naturally and beneficially coexist within the horse’s gut, were not significantly different between the groups.
Conclusions
- From these results, the study concludes that withholding food has a significant effect on the diversity and composition of faecal bacterial microbiota in horses, particularly when withheld for more than 10 hours.
- Hence, these changes should be considered when interpreting data on equine faecal bacterial microbiota, meaning that any health evaluation of horses, especially regarding colic conditions, should take these effects into account.
Cite This Article
APA
Willette JA, Pitta D, Indugu N, Vecchiarelli B, Hennessy ML, Dobbie T, Southwood LL.
(2021).
Experimental crossover study on the effects of withholding feed for 24 h on the equine faecal bacterial microbiota in healthy mares.
BMC Vet Res, 17(1), 3.
https://doi.org/10.1186/s12917-020-02706-8 Publication
Researcher Affiliations
- Departments of Clinical Studies, New Bolton Center, University of Pennsylvania School of Veterinary Medicine, 382 West Street Rd, Kennett Square, PA, 19348, USA.
- Present address: Department of Clinical Sciences, Michigan State University, East Lansing, MI, USA.
- Departments of Clinical Studies, New Bolton Center, University of Pennsylvania School of Veterinary Medicine, 382 West Street Rd, Kennett Square, PA, 19348, USA.
- Departments of Clinical Studies, New Bolton Center, University of Pennsylvania School of Veterinary Medicine, 382 West Street Rd, Kennett Square, PA, 19348, USA.
- Departments of Clinical Studies, New Bolton Center, University of Pennsylvania School of Veterinary Medicine, 382 West Street Rd, Kennett Square, PA, 19348, USA.
- Departments of Clinical Studies, New Bolton Center, University of Pennsylvania School of Veterinary Medicine, 382 West Street Rd, Kennett Square, PA, 19348, USA.
- Departments of Clinical Studies, New Bolton Center, University of Pennsylvania School of Veterinary Medicine, 382 West Street Rd, Kennett Square, PA, 19348, USA.
- Departments of Clinical Studies, New Bolton Center, University of Pennsylvania School of Veterinary Medicine, 382 West Street Rd, Kennett Square, PA, 19348, USA. southwoo@vet.upenn.edu.
MeSH Terms
- Animal Feed
- Animals
- Cross-Over Studies
- Fasting
- Feces / microbiology
- Female
- Gastrointestinal Microbiome
- Horses
Conflict of Interest Statement
No competing interests have been declared.
References
This article includes 42 references
- Goyal A, Yeh A, Bush BR, Firek BA, Siebold LM, Rogers MB, Kufen AD, Morowitz MJ. Safety, Clinical Response, and Microbiome Findings Following Fecal Microbiota Transplant in Children With Inflammatory Bowel Disease.. Inflamm Bowel Dis 2018 Jan 18;24(2):410-421.
- Kao D, Hotte N, Gillevet P, Madsen K. Fecal microbiota transplantation inducing remission in Crohn's colitis and the associated changes in fecal microbial profile.. J Clin Gastroenterol 2014 Aug;48(7):625-8.
- Khoruts A, Dicksved J, Jansson JK, Sadowsky MJ. Changes in the composition of the human fecal microbiome after bacteriotherapy for recurrent Clostridium difficile-associated diarrhea.. J Clin Gastroenterol 2010 May-Jun;44(5):354-60.
- Rea MC, O'Sullivan O, Shanahan F, O'Toole PW, Stanton C, Ross RP, Hill C. Clostridium difficile carriage in elderly subjects and associated changes in the intestinal microbiota.. J Clin Microbiol 2012 Mar;50(3):867-75.
- Fecteau ME, Pitta DW, Vecchiarelli B, Indugu N, Kumar S, Gallagher SC, Fyock TL, Sweeney RW. Dysbiosis of the Fecal Microbiota in Cattle Infected with Mycobacterium avium subsp. paratuberculosis.. PLoS One 2016;11(8):e0160353.
- Stewart HL, Southwood LL, Indugu N, Vecchiarelli B, Engiles JB, Pitta D. Differences in the equine faecal microbiota between horses presenting to a tertiary referral hospital for colic compared with an elective surgical procedure.. Equine Vet J 2019 May;51(3):336-342.
- Salem SE, Maddox TW, Antczak P, Ketley JM, Williams NJ, Archer DC. Acute changes in the colonic microbiota are associated with large intestinal forms of surgical colic.. BMC Vet Res 2019 Dec 21;15(1):468.
- Stewart HL, Pitta D, Indugu N, Vecchiarelli B, Hennessy ML, Engiles JB, Southwood LL. Changes in the faecal bacterial microbiota during hospitalisation of horses with colic and the effect of different causes of colic.. Equine Vet J 2021 Nov;53(6):1119-1131.
- Stewart HL, Engiles JB, Stefanovski D, Southwood L. Clinical and intestinal histologic features of horses treated for recurrent colic: 66 cases (2006-2015).. J Am Vet Med Assoc 2018 May 15;252(10):1279-1288.
- Weese JS, Holcombe SJ, Embertson RM, Kurtz KA, Roessner HA, Jalali M, Wismer SE. Changes in the faecal microbiota of mares precede the development of post partum colic.. Equine Vet J 2015 Nov;47(6):641-9.
- Costa MC, Arroyo LG, Allen-Vercoe E, Stu00e4mpfli HR, Kim PT, Sturgeon A, Weese JS. Comparison of the fecal microbiota of healthy horses and horses with colitis by high throughput sequencing of the V3-V5 region of the 16S rRNA gene.. PLoS One 2012;7(7):e41484.
- Frank DN, St Amand AL, Feldman RA, Boedeker EC, Harpaz N, Pace NR. Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases.. Proc Natl Acad Sci U S A 2007 Aug 21;104(34):13780-5.
- Lewis JD, Chen EZ, Baldassano RN, Otley AR, Griffiths AM, Lee D, Bittinger K, Bailey A, Friedman ES, Hoffmann C, Albenberg L, Sinha R, Compher C, Gilroy E, Nessel L, Grant A, Chehoud C, Li H, Wu GD, Bushman FD. Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn's Disease.. Cell Host Microbe 2015 Oct 14;18(4):489-500.
- Halfvarson J, Brislawn CJ, Lamendella R, Vu00e1zquez-Baeza Y, Walters WA, Bramer LM, D'Amato M, Bonfiglio F, McDonald D, Gonzalez A, McClure EE, Dunklebarger MF, Knight R, Jansson JK. Dynamics of the human gut microbiome in inflammatory bowel disease.. Nat Microbiol 2017 Feb 13;2:17004.
- Metcalf JL, Song SJ, Morton JT, Weiss S, Seguin-Orlando A, Joly F, Feh C, Taberlet P, Coissac E, Amir A, Willerslev E, Knight R, McKenzie V, Orlando L. Evaluating the impact of domestication and captivity on the horse gut microbiome.. Sci Rep 2017 Nov 14;7(1):15497.
- Salem SE, Maddox TW, Berg A, Antczak P, Ketley JM, Williams NJ, Archer DC. Variation in faecal microbiota in a group of horses managed at pasture over a 12-month period.. Sci Rep 2018 May 31;8(1):8510.
- Schoster A, Mosing M, Jalali M, Staempfli HR, Weese JS. Effects of transport, fasting and anaesthesia on the faecal microbiota of healthy adult horses.. Equine Vet J 2016 Sep;48(5):595-602.
- Kauter A, Epping L, Semmler T, Antao EM, Kannapin D, Stoeckle SD, et al. The gut microbiome of horses: current research on equine enteral microbiota and future perspectives. Animal Microbiome. 2019;1(1):14. doi: 10.1186/s42523-019-0013-3.
- Tennant B, Malm OJ, Horowitz RE, Levenson SM. Response of germfree, conventional, conventionalized and E. coli monocontaminated mice to starvation.. J Nutr 1968 Feb;94(2):151-60.
- Crawford PA, Crowley JR, Sambandam N, Muegge BD, Costello EK, Hamady M, Knight R, Gordon JI. Regulation of myocardial ketone body metabolism by the gut microbiota during nutrient deprivation.. Proc Natl Acad Sci U S A 2009 Jul 7;106(27):11276-81.
- McCabe MS, Cormican P, Keogh K, O'Connor A, O'Hara E, Palladino RA, Kenny DA, Waters SM. Illumina MiSeq Phylogenetic Amplicon Sequencing Shows a Large Reduction of an Uncharacterised Succinivibrionaceae and an Increase of the Methanobrevibacter gottschalkii Clade in Feed Restricted Cattle.. PLoS One 2015;10(7):e0133234.
- Kohl KD, Amaya J, Passement CA, Dearing MD, McCue MD. Unique and shared responses of the gut microbiota to prolonged fasting: a comparative study across five classes of vertebrate hosts.. FEMS Microbiol Ecol 2014 Dec;90(3):883-94.
- Karakan T. Intermittent fasting and gut microbiota.. Turk J Gastroenterol 2019 Dec;30(12):1008.
- Kim JN, Song J, Kim EJ, Chang J, Kim CH, Seo S, Chang MB, Bae GS. Effects of short-term fasting on in vivo rumen microbiota and in vitro rumen fermentation characteristics.. Asian-Australas J Anim Sci 2019 Jun;32(6):776-782.
- Waters JL, Ley RE. The human gut bacteria Christensenellaceae are widespread, heritable, and associated with health.. BMC Biol 2019 Oct 28;17(1):83.
- Roager HM, Hansen LB, Bahl MI, Frandsen HL, Carvalho V, Gu00f8bel RJ, Dalgaard MD, Plichta DR, Sparholt MH, Vestergaard H, Hansen T, Sicheritz-Pontu00e9n T, Nielsen HB, Pedersen O, Lauritzen L, Kristensen M, Gupta R, Licht TR. Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut.. Nat Microbiol 2016 Jun 27;1(9):16093.
- Goodrich JK, Waters JL, Poole AC, Sutter JL, Koren O, Blekhman R, Beaumont M, Van Treuren W, Knight R, Bell JT, Spector TD, Clark AG, Ley RE. Human genetics shape the gut microbiome.. Cell 2014 Nov 6;159(4):789-99.
- Myer PR, Smith TP, Wells JE, Kuehn LA, Freetly HC. Rumen microbiome from steers differing in feed efficiency.. PLoS One 2015;10(6):e0129174.
- Biddle AS, Black SJ, Blanchard JL. An in vitro model of the horse gut microbiome enables identification of lactate-utilizing bacteria that differentially respond to starch induction.. PLoS One 2013;8(10):e77599.
- Harlow BE, Lawrence LM, Hayes SH, Crum A, Flythe MD. Effect of Dietary Starch Source and Concentration on Equine Fecal Microbiota.. PLoS One 2016;11(4):e0154037.
- Daly K, Proudman CJ, Duncan SH, Flint HJ, Dyer J, Shirazi-Beechey SP. Alterations in microbiota and fermentation products in equine large intestine in response to dietary variation and intestinal disease.. Br J Nutr 2012 Apr;107(7):989-95.
- Willing B, Vu00f6ru00f6s A, Roos S, Jones C, Jansson A, Lindberg JE. Changes in faecal bacteria associated with concentrate and forage-only diets fed to horses in training.. Equine Vet J 2009 Dec;41(9):908-14.
- Stewart HL, Pitta D, Indugu N, Vecchiarelli B, Engiles JB, Southwood LL. Characterization of the fecal microbiota of healthy horses.. Am J Vet Res 2018 Aug;79(8):811-819.
- Pitta DW, Kumar S, Vecchiarelli B, Shirley DJ, Bittinger K, Baker LD, Ferguson JD, Thomsen N. Temporal dynamics in the ruminal microbiome of dairy cows during the transition period.. J Anim Sci 2014 Sep;92(9):4014-22.
- Song SJ, Lauber C, Costello EK, Lozupone CA, Humphrey G, Berg-Lyons D, Caporaso JG, Knights D, Clemente JC, Nakielny S, Gordon JI, Fierer N, Knight R. Cohabiting family members share microbiota with one another and with their dogs.. Elife 2013 Apr 16;2:e00458.
- Wu S, Baldwin RL, Li W, Li C, Connor EE, Li RW. The bacterial community composition of the bovine rumen detected using pyrosequencing of 16S rRNA genes. Metagenomics. 2012;1(11):1u201311. doi: 10.4303/mg/235571.
- Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodru00edguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vu00e1zquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CHD, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.. Nat Biotechnol 2019 Aug;37(8):852-857.
- Callahan BJ, McMurdie PJ, Rosen MJ, Han AW, Johnson AJ, Holmes SP. DADA2: High-resolution sample inference from Illumina amplicon data.. Nat Methods 2016 Jul;13(7):581-3.
- Katoh K, Standley DM. MAFFT multiple sequence alignment software version 7: improvements in performance and usability.. Mol Biol Evol 2013 Apr;30(4):772-80.
- Price MN, Dehal PS, Arkin AP. FastTree 2--approximately maximum-likelihood trees for large alignments.. PLoS One 2010 Mar 10;5(3):e9490.
- DeSantis TZ, Hugenholtz P, Larsen N, Rojas M, Brodie EL, Keller K, Huber T, Dalevi D, Hu P, Andersen GL. Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB.. Appl Environ Microbiol 2006 Jul;72(7):5069-72.
- Anderson MJ. A new method for non parametric multivariate analysis of variance. Austral Ecol. 2001;26(1):32u201346.
Citations
This article has been cited 1 times.- Johnson ACB, Biddle AS. A Standard Scale to Measure Equine Keeper Status and the Effect of Metabolic Tendency on Gut Microbiome Structure.. Animals (Basel) 2021 Jul 1;11(7).