Surveillance of animal diseases through implementation of a Bayesian spatio-temporal model: A simulation example with neurological syndromes in horses and West Nile Virus.
Abstract: A potentially sensitive way to detect disease outbreaks is syndromic surveillance, i.e. monitoring the number of syndromes reported in the population of interest, comparing it to the baseline rate, and drawing conclusions about outbreaks using statistical methods. A decision maker may use the results to take disease control actions or to initiate enhanced epidemiological investigations. In addition to the total count of syndromes there are often additional pieces of information to consider when assessing the probability of an outbreak. This includes clustering of syndromes in space and time as well as historical data on the occurrence of syndromes, seasonality of the disease, etc. In this paper, we show how Bayesian theory for syndromic surveillance applies to the occurrence of neurological syndromes in horses in France. Neurological syndromes in horses may be connected e.g. to West Nile Virus (WNV), a zoonotic disease of growing concern for public health in Europe. A Bayesian method for spatio-temporal cluster detection of syndromes and for determining the probability of an outbreak is presented. It is shown how surveillance can be performed simultaneously for a specific class of diseases (WNV or diseases similar to WNV in terms of the information available to the system) and a non-specific class of diseases (not similar to WNV in terms of the information available to the system). We also discuss some new extensions to the spatio-temporal models and the computational algorithms involved. It is shown step-by-step how data from historical WNV outbreaks and surveillance data for neurological syndromes can be used for model construction. The model is implemented using a Gibbs sampling procedure, and its sensitivity and specificity is evaluated. Finally, it is illustrated how predictive modelling of syndromes can be useful for decision making in animal health surveillance.
Copyright © 2018 Elsevier B.V. All rights reserved.
Publication Date: 2018-11-26 PubMed ID: 30621904DOI: 10.1016/j.prevetmed.2018.11.010Google Scholar: Lookup
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- Journal Article
- Animal Health
- Bayesian Analysis
- Disease control
- Disease Diagnosis
- Disease Management
- Disease Outbreaks
- Disease Prevalence
- Disease Surveillance
- Disease Treatment
- Epidemiology
- Equine Health
- Horses
- Infectious Disease
- Neurological Diseases
- Predictive Model
- Public Health
- Veterinary Medicine
- Veterinary Science
- West Nile Virus
- Zoonotic Diseases
Summary
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The study presents a Bayesian-model-based approach for monitoring and predicting disease outbreaks, specifically West Nile Virus in horses, by observing syndromes reported in the population of interest.
Objective of the Study
- The primary aim of this research investigation was to demonstrate the application of Bayesian theory towards syndromic surveillance and its significance in monitoring neurological syndromes in horses susceptible to the West Nile Virus (WNV).
Bayesian Model for Syndromic Surveillance
- The study builds on the concept of syndromic surveillance, which is a strategy of monitoring the number of syndromes reported in a particular population and comparing this with the baseline rate. By using statistical methods, researchers can draw conclusions about disease outbreaks.
- Building upon this, the researchers adapted Bayesian theory, a statistical methodology for estimating probabilities, to this surveillance concept, creating a model which took into account not just the syndrome count, but also additional factors like space and time clustering of syndromes, historical syndrome data, and disease seasonality.
Application of the Model
- Evidence was given of how the new model can track and predict outbreaks of specific diseases, like the WNV, and of non-specific diseases. The former was achieved by focusing on diseases with similar information available as WNV, while the latter dealt with diseases unrelated to WNV in terms of available data.
- Data from historical WNV outbreaks was used to construct the model, along with surveillance data for neurological syndromes in horses.
- The model was run using a Gibbs sampling procedure, a statistical technique used for approximating a multivariate probability distribution.
Outcomes and Future Implications
- The effectiveness of the Bayesian model was established in terms of sensitivity and specificity. This was done to ensure the model was correctly identifying true positive and true negative instances.
- The study’s authors argue that predictive modelling of syndromes, such as this, can contribute significantly towards decision-making processes in animal health surveillance. This can enable more timely and effective interventions during disease outbreaks.
Cite This Article
APA
Hedell R, Andersson MG, Faverjon C, Marcillaud-Pitel C, Leblond A, Mostad P.
(2018).
Surveillance of animal diseases through implementation of a Bayesian spatio-temporal model: A simulation example with neurological syndromes in horses and West Nile Virus.
Prev Vet Med, 162, 95-106.
https://doi.org/10.1016/j.prevetmed.2018.11.010 Publication
Researcher Affiliations
- Swedish National Forensic Centre, SE-581 94 Linköping, Sweden; Department of Mathematical Sciences, Chalmers University of Technology and University of Gothenburg, SE-412 96 Gothenburg, Sweden. Electronic address: ronny.hedell@polisen.se.
- National Veterinary Institute, SE-751 89 Uppsala, Sweden. Electronic address: gunnar.andersson@sva.se.
- Veterinary Public Health Institute, Vetsuisse Faculty, University of Bern, Schwarzenburgstrasse 155, 3097 Liebefeld, Switzerland. Electronic address: celine.faverjon@vetsuisse.unibe.ch.
- Réseau d'épidémio-surveillance en pathologie équine, rue Nelson Mandela, 14280 Saint Contest, France. Electronic address: c.marcillaud-pitel@respe.net.
- EPIA, INRA, University of Lyon, VetAgro Sup, 69280 Marcy L'Etoile, France. Electronic address: agnes.leblond@vetagro-sup.fr.
- Department of Mathematical Sciences, Chalmers University of Technology and University of Gothenburg, SE-412 96 Gothenburg, Sweden. Electronic address: mostad@chalmers.se.
MeSH Terms
- Algorithms
- Animals
- Bayes Theorem
- Disease Outbreaks / veterinary
- France / epidemiology
- Horse Diseases / epidemiology
- Horses
- Nervous System Diseases / epidemiology
- Nervous System Diseases / veterinary
- Sentinel Surveillance / veterinary
- Spatio-Temporal Analysis
- West Nile Fever / epidemiology
- West Nile Fever / veterinary
Citations
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