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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Equine arteritis virus: a new isolate from the presumable first carrier stallion in Argentina and its genetic relationships among the four reported unique Argentinean strains.
Archives of virology    October 21, 2008   Volume 153, Issue 11 2111-2115 doi: 10.1007/s00705-008-0224-5
Metz GE, Serena MS, Ocampos GM, Panei CJ, Fernandez VL, Echeverría MG.Equine arteritis virus (EAV) was isolated from a testicle of the presumable first stallion infected with EAV in Argentina. This virus isolate (named LT-LP-ARG) was confirmed by GP5-specific PCR and indirect immunofluorescence assays. The PCR product was sequenced, and the phylogenetic analysis revealed that the LT-LP-ARG strain of EAV forms a monophyletic group, together with other strains previously isolated in our laboratory (LP02 group). However, all Argentinean EAV strains belong to a polyphyletic group. We believe that the virus isolate presented in this report could be the origin of EAV ...
Effect of HCG in the presence of HCG antibodies on the follicle, hormone concentrations, and oocyte in mares.
Reproduction in domestic animals = Zuchthygiene    October 21, 2008   Volume 44, Issue 3 474-479 doi: 10.1111/j.1439-0531.2008.01133.x
Siddiqui MA, Gastal EL, Gastal MO, Beg MA, Ginther OJ.Follicle blood flow, follicular-fluid and plasma hormone concentrations, and oocyte quality were studied 30 h after an ovulation-inducing hCG treatment when the pre-ovulatory follicle was 32 mm. Mares were grouped as positive (n = 16) and negative (n = 44) for hCG antibodies before the experimental hCG treatment. Percentage of the follicle wall with blood flow signals was less (p < 0.05) in the antibody positive group than in the negative group. The concentrations of follicular-fluid oestradiol and free IGF1, and plasma oestradiol were greater (p < 0.001), and follicular-fluid progesterone (p ...
Maternal transfer of IgE and subsequent development of IgE responses in the horse (Equus callabus).
Veterinary immunology and immunopathology    October 19, 2008   Volume 127, Issue 3-4 203-211 doi: 10.1016/j.vetimm.2008.10.316
Marti E, Ehrensperger F, Burger D, Ousey J, Day MJ, Wilson AD.Immunoglobulin E (IgE) mediates the immune response to parasites, but can also cause allergies. In humans maternal IgE is not transferred to cord blood and high levels of cord blood IgE are associated with subsequent allergy. In horses, both maternal IgG and IgE are transferred via colostrum; the IgE levels in the mare's serum, the colostrum and the foal's serum are correlated but the consequences of IgE transfer to foals are not known. By about 6 weeks of age the levels of IgE in foal serum have dropped to a nadir, at 6 months of age the level of IgE has risen only very slightly and is no lon...
Third International Symposium on Biomolecular Archaeology. Trail of mare’s milk leads to first tamed horses.
Science (New York, N.Y.)    October 18, 2008   Volume 322, Issue 5900 368 doi: 10.1126/science.322.5900.368a
Travis J.No abstract available
Expression microarrays in equine sciences.
Veterinary immunology and immunopathology    October 18, 2008   Volume 127, Issue 3-4 197-202 doi: 10.1016/j.vetimm.2008.10.314
Ramery E, Closset R, Art T, Bureau F, Lekeux P.Microarrays have become an important research tool for life science researchers. Expression microarrays are capable of profiling the gene expression pattern of tens of thousands of genes in a single experiment. It appears to be the platform of choice for parallel gene expression profiling. Various equine-specific gene expression microarrays have been generated and used. However, homologous microarrays are not yet commercially available for the horse. An alternative is the use of heterologous microarrays, mainly microarrays specific for mice or humans. Although the use of microarrays in equine ...
Follicle deviation in ovulatory follicular waves with one or two dominant follicles in mares.
Reproduction in domestic animals = Zuchthygiene    October 18, 2008   Volume 44, Issue 2 248-254 doi: 10.1111/j.1439-0531.2007.01048.x
Jacob JC, Gastal EL, Gastal MO, Carvalho GR, Beg MA, Ginther OJ.The follicle and hormone aspects of diameter deviation and development of one dominant (>/=28 mm) follicle (1DF) vs two dominant follicles (2DF) were studied in 32 ovulatory follicular waves in mares. Follicles were ranked each day as F1 (largest) to F3. The beginning of deviation was designated day 0 and preceded the first increase in the differences in diameter between F1 and F2 in the 1DF group and between a combination of F1 and F2 vs F3 in the 2DF group. One dominant follicle and 2DF developed in 21 (66%) and 11 (34%) waves, respectively. Double ovulations occurred in only one of the w...
Characteristics, diagnosis, and treatment of inherited platelet disorders in mammals.
Journal of the American Veterinary Medical Association    October 17, 2008   Volume 233, Issue 8 1251-1190 doi: 10.2460/javma.233.8.1251
Boudreaux MK.Inherited intrinsic platelet disorders have been identified in dogs, cattle, horses, and cats as well as other animals. The prevalence of mutations in some breeds is high, making these disorders potentially as common as von Willebrand disease in certain breed lineages.
Horse domestication and conservation genetics of Przewalski’s horse inferred from sex chromosomal and autosomal sequences.
Molecular biology and evolution    October 17, 2008   Volume 26, Issue 1 199-208 doi: 10.1093/molbev/msn239
Lau AN, Peng L, Goto H, Chemnick L, Ryder OA, Makova KD.Despite their ability to interbreed and produce fertile offspring, there is continued disagreement about the genetic relationship of the domestic horse (Equus caballus) to its endangered wild relative, Przewalski's horse (Equus przewalskii). Analyses have differed as to whether or not Przewalski's horse is placed phylogenetically as a separate sister group to domestic horses. Because Przewalski's horse and domestic horse are so closely related, genetic data can also be used to infer domestication-specific differences between the two. To investigate the genetic relationship of Przewalski's hors...
Age-related changes in cytokine expression by neutrophils of foals stimulated with virulent Rhodococcus equi in vitro.
Veterinary immunology and immunopathology    October 17, 2008   Volume 127, Issue 3-4 212-219 doi: 10.1016/j.vetimm.2008.10.004
Nerren JR, Martens RJ, Payne S, Murrell J, Butler JL, Cohen ND.Although evidence exists that neutrophils play a vital role in resistance to infection with Rhodococcus equi, the means by which neutrophils exert their effects have not been clearly defined. In the present study we evaluated differences in cytokine expression by unstimulated and R. equi-stimulated neutrophils obtained from newborn foals and subsequently at 2-, 4-, and 8-weeks of age. Stimulation with virulent R. equi induced significantly (P<0.05) greater expression of IFNgamma, TNFalpha, IL-6, IL-8, IL-12p40, IL-12p35, and IL-23p19 mRNA relative to expression by unstimulated neutrophils, ...
Temporal detection of Lawsonia intracellularis using serology and real-time PCR in Thoroughbred horses residing on a farm endemic for equine proliferative enteropathy.
Veterinary microbiology    October 15, 2008   Volume 136, Issue 1-2 173-176 doi: 10.1016/j.vetmic.2008.10.004
Pusterla N, Jackson R, Wilson R, Collier J, Mapes S, Gebhart C.The goals of this study were to evaluate titers of antibodies against Lawsonia intracellularis in 68 resident broodmares from a farm known to be endemic for equine proliferative enteropathy (EPE) and to evaluate maternal antibodies, occurrence of seroconversion and fecal shedding in their foals. Serum samples collected from mares at delivery and from foals pre- and post-colostrum ingestion and monthly thereafter were tested for the presence of L. intracellularis antibodies by immunoperoxidase monolayer assay (IPMA). Further, feces collected from mares at delivery and foals post-partum and mont...
Temporal relationships and repeatability of follicle diameters and hormone concentrations within individuals in mares.
Reproduction in domestic animals = Zuchthygiene    October 15, 2008   Volume 44, Issue 1 92-99 doi: 10.1111/j.1439-0531.2007.01003.x
Jacob JC, Gastal EL, Gastal MO, Carvalho GR, Beg MA, Ginther OJ.Data were collected daily from 23 mares during two consecutive interovulatory intervals (IOIs). Several significant (p < 0.05) new observations on temporal relationships were made. The FSH increase that begins before ovulation temporarily plateaued on the day of discharge of follicular fluid into the peritoneal cavity in association with ovulation. During the declining portion of the pre-ovulatory oestradiol surge, an abrupt reduction in the rate of decrease occurred in synchrony with the peak of the LH surge and is consistent with a negative effect of LH on oestradiol. Repeatability within...
MSC frequency correlates with blood vessel density in equine adipose tissue.
Tissue engineering. Part A    October 14, 2008   Volume 15, Issue 2 221-229 doi: 10.1089/ten.tea.2008.0103
da Silva Meirelles L, Sand TT, Harman RJ, Lennon DP, Caplan AI.Mesenchymal stem cells (MSCs) are multipotent cells that have the capacity to develop into different mature mesenchymal cell types. They were originally isolated from bone marrow, but MSC-like cells have also been isolated from other tissues. The common feature of all of these tissues is that they all house blood vessels. It is, thus, possible that MSCs are associated with perivascular locations. The objective of this work was to test the hypothesis that MSCs are associated with blood vessels by verifying if MSC frequency positively correlates with blood vessel density. To this end, samples fr...
A 4,103 marker integrated physical and comparative map of the horse genome.
Cytogenetic and genome research    October 14, 2008   Volume 122, Issue 1 28-36 doi: 10.1159/000151313
Raudsepp T, Gustafson-Seabury A, Durkin K, Wagner ML, Goh G, Seabury CM, Brinkmeyer-Langford C, Lee EJ, Agarwala R, Stallknecht-Rice E, Schäffer AA....A comprehensive second-generation whole genome radiation hybrid (RH II), cytogenetic and comparative map of the horse genome (2n = 64) has been developed using the 5000rad horse x hamster radiation hybrid panel and fluorescence in situ hybridization (FISH). The map contains 4,103 markers (3,816 RH; 1,144 FISH) assigned to all 31 pairs of autosomes and the X chromosome. The RH maps of individual chromosomes are anchored and oriented using 857 cytogenetic markers. The overall resolution of the map is one marker per 775 kilobase pairs (kb), which represents a more than five-fold improvement over ...
Differential induction of MyD88- and TRIF-dependent pathways in equine monocytes by Toll-like receptor agonists.
Veterinary immunology and immunopathology    October 11, 2008   Volume 127, Issue 1-2 125-134 doi: 10.1016/j.vetimm.2008.09.028
Figueiredo MD, Vandenplas ML, Hurley DJ, Moore JN.Our understanding of the innate immune response in the horse has been limited by a lack of definitive data concerning cell signaling in response to microbial products. Toll-like receptors (TLRs) recognize conserved molecular motifs of microbes and elicit immune responses through their coupling with intracellular adaptor molecules, particularly MyD88 and TRIF. To provide a more definitive characterization of TLR signaling in the horse, the objectives of this study were to: (1) characterize the responses of equine monocytes to TLR ligands that signal through MyD88, TRIF or both in other species,...
Case of bilateral seminoma in a trotter stallion.
Reproduction in domestic animals = Zuchthygiene    October 10, 2008   Volume 45, Issue 3 537-539 doi: 10.1111/j.1439-0531.2008.01212.x
Govaere J, Ducatelle R, Hoogewijs M, De Schauwer C, de Kruif A.This report describes a bilateral seminoma in a stallion. After slaughter, histological examination revealed that the tumour consisted predominantly of polyhedral tumour cells with large nuclei, obvious nucleoli and a small border of cytoplasm. The mitotic index was low and Ki67 staining revealed 4% nuclear staining. To our knowledge, this paper is the first using Ki67 staining as a method to evaluate the mitotic rate in a testicular seminoma in the stallion.
A unique method to produce transgenic embryos in ovine, porcine, feline, bovine and equine species.
Reproduction, fertility, and development    October 10, 2008   Volume 20, Issue 7 741-749 doi: 10.1071/rd07172
Pereyra-Bonnet F, Fernández-Martín R, Olivera R, Jarazo J, Vichera G, Gibbons A, Salamone D.Transgenesis is an essential tool in many biotechnological applications. Intracytoplasmic sperm injection (ICSI)-mediated gene transfer is a powerful technique to obtain transgenic pups; however, most domestic animal embryos do not develop properly after ICSI. An additional step in the protocol, namely assistance by haploid chemical activation, permits the use of ICSI-mediated gene transfer to generate transgenic preimplantation embryos in a wide range of domestic species, including ovine, porcine, feline, equine and bovine. In the present study, spermatozoa from five species were coincubated ...
Analysis of cartilage oligomeric matrix protein (COMP) in synovial fluid, serum and urine from 51 racehorses with carpal bone fracture.
The Journal of veterinary medical science    October 9, 2008   Volume 70, Issue 9 915-921 doi: 10.1292/jvms.70.915
Arai K, Tagami M, Hatazoe T, Nishimatsu E, Shimizu Y, Fujiki M, Misumi K.We investigated the relationship between cartilage oligomeric matrix protein (COMP) levels in synovial fluid (SF), serum and urine and the development of osteochondral damage and osteophyte (OP) formation following intraarticular fractures of the carpus in racehorses in order to assess the clinical usefulness of COMP as a diagnostic biomarker of developmental osteoarthritis (OA). Two monoclonal antibodies (mAb clones 2A11 and 3C8) raised against equine COMP were shown to be capable of detecting the molecule in serum and urine as well as SF. Fifty-one samples were obtained from 26 OP-positive (...
Genetic analysis, breed assignment and conservation priorities of three native Danish horse breeds.
Animal genetics    October 9, 2008   Volume 39, Issue 5 496-505 doi: 10.1111/j.1365-2052.2008.01767.x
Thirstrup JP, Pertoldi C, Loeschcke V.A genetic analysis was performed on three indigenous Danish horse breeds using 12 microsatellite markers from a standard kit for parental testing. These three breeds are all considered endangered based on their small population sizes. Genetic variation in these three breeds was comparable to other horse breeds in Europe, and they do not seem to be at immediate danger of extinction caused by genetic deterioration. The Knabstrupper breed had more genetic variation, as measured by expected heterozygosity and allelic richness, than the other two breeds (Frederiksborg and Jutland). F(ST) statistics...
Genetic Analyses of an H3N8 Influenza Virus Isolate, Causative Strain of the Outbreak of Equine Influenza at the Kanazawa Racecourse in Japan in 2007.
The Journal of veterinary medical science    October 9, 2008   Volume 70, Issue 9 899-906 doi: 10.1292/jvms.70.899
Ito M, Nagai M, Hayakawa Y, Komae H, Murakami N, Yotsuya S, Asakura S, Sakoda Y, Kida H.In August 2007, an outbreak of equine influenza occurred among vaccinated racehorses with Japanese commercial equine influenza vaccine at Kanazawa Racecourse in Ishikawa prefecture in Japan. Apparent symptoms were pyrexia (38.2-41.0 degrees C) and nasal discharge with or without coughing, although approximately half of the infected horses were subclinical. All horses had been shot with a vaccine that contained two inactivated H3N8 influenza virus strains [A/equine/La Plata/93 (La Plata/93) of American lineage and A/equine/Avesta/93 (Avesta/93) of European lineage] and an H7N7 strain (A/equine/...
Development of an unambiguous and discriminatory multilocus sequence typing scheme for the Streptococcus zooepidemicus group.
Microbiology (Reading, England)    October 4, 2008   Volume 154, Issue Pt 10 3016-3024 doi: 10.1099/mic.0.2008/018911-0
Webb K, Jolley KA, Mitchell Z, Robinson C, Newton JR, Maiden MCJ, Waller A.The zoonotic pathogen Streptococcus equi subsp. zooepidemicus (S. zooepidemicus) is commonly found harmlessly colonizing the equine nasopharynx. Occasionally, strains can invade host tissues or cross species barriers, and S. zooepidemicus is associated with numerous different diseases in a variety of hosts, including inflammatory airway disease and abortion in horses, pneumonia in dogs and meningitis in humans. A biovar of S. zooepidemicus, Streptococcus equi subsp. equi, is the causative agent of strangles, one of the most important infections of horses worldwide. We report here the developme...
Congenital ocular anomalies in purebred and crossbred Rocky and Kentucky Mountain horses in Canada.
The Canadian veterinary journal = La revue veterinaire canadienne    October 2, 2008   Volume 49, Issue 7 675-681 
Grahn BH, Pinard C, Archer S, Bellone R, Forsyth G, Sandmeyer LS.Multiple congenital ocular anomalies in purebred and crossbred Rocky and Kentucky Mountain horses in Canada are frequently diagnosed with biomicroscopic and indirect ophthalmoscopic examination. In order of frequency detected, these include temporal ciliary epithelial cysts; iridal hypoplasia; prominent corneas; focal temporal retinal degeneration related to ciliary cysts; and, rarely, retinal detachment. A pedigree analysis confirms a dominant mode of inheritance with incomplete penetrance and with a linkage to coat color. Des anomalies oculaires congénitales multiples chez des chevaux Rock...
Cystic fibrosis and the isolation of Pseudomonas aeruginosa from horses.
The Veterinary record    September 30, 2008   Volume 163, Issue 13 399-400 doi: 10.1136/vr.163.13.399-c
Moore JE, Goldsmith CE, Millar BC, Rooney PJ, Buckley T, Dooley JS, Rendall J, Elborn JS.No abstract available
Estimation of genetic parameters on conformation traits of the Iranian Arab horses population.
Pakistan journal of biological sciences : PJBS    September 27, 2008   Volume 11, Issue 2 280-284 doi: 10.3923/pjbs.2008.280.284
Gharahveysi S, Kashan NE, Gerami A, Torshizi RV.Arab horse is a popular pure breed in Iran and is registered by World Arabian Horse Organization (WAHO). There is no scientific study and research about this breed. In this research 13 conformation traits on a random sample of the Iranian Arab horses studied. The estimate of variance components estimated by Animal Model and Derivative Free Restricted Maximum Likelihood (DF-REML) approach and DF-REML software. Heritability of conformation traits is also evaluated. The range of estimated heritability were (0.050 +/- 0.008) neck length and (0.614 +/- 0.087) croup height. Results indicated that, c...
Lymphoproliferative disease with features of lymphoma in the central nervous system of a horse.
Journal of comparative pathology    September 27, 2008   Volume 139, Issue 4 256-261 doi: 10.1016/j.jcpa.2008.07.008
Morrison LR, Freel K, Henderson I, Hahn C, Smith SH.Lymphoma (malignant lymphoma, lymphosarcoma) is uncommon in horses in the United Kingdom. This report describes an unusual form of lymphoproliferative disease with features of lymphoma restricted to the central nervous system (CNS) and with no evidence of a primary lesion elsewhere. Immunohistochemical examination defined an overwhelming predominance of T lymphocytes with admixed B lymphocytes and activated macrophages. This case exemplifies the challenges associated with definitive diagnosis of lymphoproliferative disease of the equine CNS.
Single nucleotide polymorphisms of interleukin-1 beta related genes and their associations with infection in the horse.
Developments in biologicals    September 27, 2008   Volume 132 347-351 doi: 10.1159/000317184
Horin P, Osickova J, Necesankova M, Matiasovic J, Musilova P, Kubickova S, Hubertova D, Vyskocil M, Rubes J.In previous work, we found significant associations of horse chromosome 15 (ECA15) microsatellite markers HMSO1 and HTG06 with two horse infections, Rhodococcus equi and Lawsonia intracellularis, respectively. Interleukin-1 beta subunit and interleukin-1 receptor antagonist encoding genes (IL1B and IL1RN) could be considered as candidate genes underlying the associations reported. Therefore, we identified single nucleotide polymorphisms (SNPs) within three interleukin-1 beta functionally related genes: IL1B, IL1RN and Casp1 (interleukin-1 beta converting enzyme/caspasel encoding gene). Using a...
Methicillin-resistant Staphylococcus aureus and animals: zoonosis or humanosis?
The Journal of antimicrobial chemotherapy    September 26, 2008   Volume 62, Issue 6 1181-1187 doi: 10.1093/jac/dkn405
Morgan M.Methicillin-resistant Staphylococcus aureus (MRSA) is increasing worldwide. Occasionally, animals are colonized or infected incidentally with human strains. Recently, however, new strains of MRSA emerging from within the animal kingdom, particularly in pigs, are causing human infection. MRSA has been reported in species as diverse as companion animals, horses and pigs, through to chinchillas, bats and parrots. In contrast, whereas strains of community-associated MRSA, the majority of which carry genes encoding Panton-Valentine leucocidin, are spreading rapidly in human populations, only sporad...
Myonuclear domain size and myosin isoform expression in muscle fibres from mammals representing a 100,000-fold difference in body size.
Experimental physiology    September 26, 2008   Volume 94, Issue 1 117-129 doi: 10.1113/expphysiol.2008.043877
Liu JX, Höglund AS, Karlsson P, Lindblad J, Qaisar R, Aare S, Bengtsson E, Larsson L.This comparative study of myonuclear domain (MND) size in mammalian species representing a 100,000-fold difference in body mass, ranging from 25 g to 2500 kg, was undertaken to improve our understanding of myonuclear organization in skeletal muscle fibres. Myonuclear domain size was calculated from three-dimensional reconstructions in a total of 235 single muscle fibre segments at a fixed sarcomere length. Irrespective of species, the largest MND size was observed in muscle fibres expressing fast myosin heavy chain (MyHC) isoforms, but in the two smallest mammalian species studied (mouse and r...
Advanced age in horses affects divisional history of T cells and inflammatory cytokine production.
Mechanisms of ageing and development    September 24, 2008   Volume 129, Issue 11 656-664 doi: 10.1016/j.mad.2008.09.004
Adams AA, Breathnach CC, Katepalli MP, Kohler K, Horohov DW.A number of model systems have been employed to investigate age-associated changes in immune function. The purpose of the current study was to characterize senescent T cells and to investigate the inflamm-aging phenomenon both in vitro and in vivo using the old horse as a model. We examined whether decreased T cell proliferation induced by Con A is caused by increased apoptosis. We also utilized intracellular CFSE to analyze changes within each round of cell proliferation, in particular cytokine production. Intracellular staining with flow cytometry, RT-PCR, and ELISA were used to measure pro-...
A GYS1 gene mutation is highly associated with polysaccharide storage myopathy in Cob Normand draught horses.
Animal genetics    September 24, 2008   Volume 40, Issue 1 94-96 doi: 10.1111/j.1365-2052.2008.01778.x
Herszberg B, McCue ME, Larcher T, Mata X, Vaiman A, Chaffaux S, Chérel Y, Valberg SJ, Mickelson JR, Guérin G.Glycogen storage diseases or glycogenoses are inherited diseases caused by abnormalities of enzymes that regulate the synthesis or degradation of glycogen. Deleterious mutations in many genes of the glyco(geno)lytic or the glycogenesis pathways can potentially cause a glycogenosis, and currently mutations in fourteen different genes are known to cause animal or human glycogenoses, resulting in myopathies and/or hepatic disorders. The genetic bases of two forms of glycogenosis are currently known in horses. A fatal neonatal polysystemic type IV glycogenosis, inherited recessively in affected Qu...
Equine herpesvirus 1 entry via endocytosis is facilitated by alphaV integrins and an RSD motif in glycoprotein D.
Journal of virology    September 24, 2008   Volume 82, Issue 23 11859-11868 doi: 10.1128/JVI.00868-08
Van de Walle GR, Peters ST, VanderVen BC, O'Callaghan DJ, Osterrieder N.Equine herpesvirus 1 (EHV-1) is a member of the Alphaherpesvirinae, and its broad tissue tropism suggests that EHV-1 may use multiple receptors to initiate virus entry. EHV-1 entry was thought to occur exclusively through fusion at the plasma membrane, but recently entry via the endocytic/phagocytic pathway was reported for Chinese hamster ovary cells (CHO-K1 cells). Here we show that cellular integrins, and more specifically those recognizing RGD motifs such as alphaVbeta5, are important during the early steps of EHV-1 entry via endocytosis in CHO-K1 cells. Moreover, mutational analysis revea...