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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Spectroscopic and electrochemical studies of horse myoglobin in dimethyl sulfoxide.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry    August 30, 2002   Volume 8, Issue 1-2 83-94 doi: 10.1007/s00775-002-0392-9
Li QC, Mabrouk PA.This paper reports the first report of rapid, reversible direct electron transfer between a redox protein, specifically, horse myoglobin, and a solid electrode substrate in nonaqueous media and the spectroscopic (UV-vis, fluorescence, and resonance Raman) characterization of the relevant redox forms of myoglobin (Mb) in dimethyl sulfoxide (DMSO). In DMSO, the heme active site of metmyoglobin (metMb) appears to remain six-coordinate high-spin, binding water weakly. Changes in the UV-fluorescence spectra for metMb in DMSO indicate that the protein secondary structure has been perturbed and sugge...
Follicle and endocrine dynamics during experimental follicle deviation in mares.
Biology of reproduction    August 24, 2002   Volume 67, Issue 3 862-867 doi: 10.1095/biolreprod.102.004309
Ginther OJ, Meira C, Beg MA, Bergfelt DR.Deviation during a follicular wave in mares begins when the largest follicle (F1) reaches a mean diameter of 22.5 mm and is characterized by continued growth of F1 to become the dominant follicle and regression of F2 to become the largest subordinate follicle. In the present study, F1 was ablated at the expected beginning of deviation (Hour 0) to provide a reference point for characterizing the intrafollicular changes preceding experimental deviation between F2 and F3. Diameters and concentrations of follicular fluid factors in F2 and F3 were determined in F1-ablated mares at Hours 0, 12, 24, ...
An activator protein-1 complex mediates epidermal growth factor regulation of equine glycoprotein alpha subunit expression in trophoblast cells.
Biology of reproduction    August 24, 2002   Volume 67, Issue 3 972-980 doi: 10.1095/biolreprod.101.001057
Thway TM, Wolfe MW.Equids and primates are the only species known to express the placental hormone chorionic gonadotropin (CG). CG is a member of the heterodimeric glycoprotein family and is composed of an alpha subunit linked to a hormone-specific beta subunit. Previously, we have reported that epidermal growth factor (EGF) regulates the equine glycoprotein hormone alpha subunit promoter through a protein kinase C (PKC)/mitogen-activated protein kinase (MAPK) signal transduction pathway in trophoblasts. The current study investigates the regulatory element/factors involved in the induction of equine glycoprotei...
Evidence for sulfatase and 17beta-hydroxysteroid dehydrogenase type 1 activities in equine epididymis and uterus.
Theriogenology    August 17, 2002   Volume 58, Issue 1 113-121 doi: 10.1016/s0093-691x(02)00917-2
Lemazurier E, Séralini GE.Our previous work showed that stallion testis produces high amounts of estrogens which are subsequently found in the ejaculate. These estrogens are mainly synthesized by testicular aromatase, and the major estrogen produced is estrone sulfate (E1S). The objective of this study was to investigate the potential role of E1S as a source of estrogens in the male and female horse reproductive tracts by determining whether both estrone sulfatase (Sulf) and 17beta-hydroxysteroid dehydrogenase type I (17beta-HSD1) activities were present in equine testes, epididymis and uterus. We assessed E1S bioconve...
[Prevalence of behavioral disorders in the Swiss horse population].
Schweizer Archiv fur Tierheilkunde    August 15, 2002   Volume 144, Issue 7 356-368 doi: 10.1024/0036-7281.144.7.356
Bachmann I, Staᆲher M.In the Swiss horse population, the prevalence of conspicuous behaviours (behavioural disorders and stable vices) was recorded with a written questionnaire in a representative survey among 1861 horse yards, and the occurrence of the stereotypic behavioural disorders crib-biting, weaving and boxwalking was analysed with emphasis on their association with horse specific (breed, age, sex) and environmental factors (e.g. housing system, nutrition, management and utilisation). 622 horse yards with a total number of 2536 horses answered to the questionnaire, and conspicuous behaviours were described ...
Geographic variability of Escherichia coli ribotypes from animals in Idaho and Georgia.
Journal of environmental quality    August 15, 2002   Volume 31, Issue 4 1273-1278 doi: 10.2134/jeq2002.1273
Hartel PG, Summer JD, Hill JL, Collins JV, Entry JA, Segars WI.Several genotypic methods have been developed for determining the host origin of fecal bacteria in contaminated waters. Some of these methods rely on a host origin database to identify environmental isolates. It is not well understood to what degree these host origin isolates are geographically variable (i.e., cosmopolitan or endemic). This is important because a geographically limited host origin database may or may not be universally applicable. The objective of our study was to use one genotypic method, ribotyping, to determine the geographic variability of the fecal bacterium, Escherichia ...
Sarcocystis neurona: parasitemia in a severe combined immunodeficient (SCID) horse fed sporocysts.
Experimental parasitology    August 14, 2002   Volume 100, Issue 3 150-154 doi: 10.1016/s0014-4894(02)00012-7
Long MT, Mines MT, Knowles DP, Tanhauser SM, Dame JB, Cutler TJ, MacKay RJ, Sellon DC.Sarcocystis neurona was isolated from the blood of a 5-month-old Arabian foal with severe combined immunodeficiency. The foal had been inoculated approximately 3 weeks previously with 5 x 10(5) sporocysts that were isolated from the intestines of an opossum and identified by restriction enzyme analysis of PCR products as S. neurona. The isolate obtained from the blood of this foal was characterized by genetic, serologic, and morphologic methods and identified as S. neurona (WSU1). This represents the first time that S. neurona has been isolated from any tissue after experimental infection of a...
Detection of natural infection of Boophilus microplus with Babesia equi and Babesia caballi in Brazilian horses using nested polymerase chain reaction.
Veterinary parasitology    August 7, 2002   Volume 107, Issue 4 351-357 doi: 10.1016/s0304-4017(02)00131-0
Battsetseg B, Lucero S, Xuan X, Claveria FG, Inoue N, Alhassan A, Kanno T, Igarashi I, Nagasawa H, Mikami T, Fujisaki K.The potential role of Boophilus microplus as a natural tick vector of Babesia equi and Babesia caballi in Brazilian horses was assessed using nested polymerase chain reaction (PCR)-based marker assay. B. equi merozoite-specific 218bp gene fragment was detected in almost 96% of horse blood samples, and 45.3-62.5% of females, eggs, larvae, and nymphs of B. microplus collected from 47 horses at Campo Grande in the State of Matto Grosso, Brazil. Except for the partially-fed female ticks, the B. caballi-specific 430bp gene fragment was amplified from horse blood samples, and all developmental stage...
Recommended terminology and advances in the systematics of the Cyathostominea (Nematoda: Strongyloidea) of horses.
Veterinary parasitology    August 7, 2002   Volume 107, Issue 4 337-342 doi: 10.1016/s0304-4017(02)00167-x
Lichtenfels JR, Gibbons LM, Krecek RC.Terminology for common names for the Tribe Cyathostominea (cyathostomins), and disease caused by the nematodes (cyathostominosis), were recommended to replace the previously used names cyathostomes and cyathostomosis, which are ambiguous, inaccurate or synonymous, by the Third Internal Workshop on the Systematics of Cyathostominea of Horses, held in Stresa, Italy, 28 August 2001. The progress by this international working group at three workshops is reviewed briefly and a list of publications is provided. Included are an annotated checklist by genus and species of 93 species level names and th...
Nitric oxide synthase inhibition speeds oxygen uptake kinetics in horses during moderate domain running.
Respiratory physiology & neurobiology    August 6, 2002   Volume 132, Issue 2 169-178 doi: 10.1016/s1569-9048(02)00068-x
Kindig CA, McDonough P, Erickson HH, Poole DC.Within the moderate exercise intensity domain, the speed of oxygen uptake (V(O(2))) kinetics at the transition to a higher metabolic rate is thought to be limited by an inertia of the oxidative machinery. Nitric oxide (NO)-induced inhibition of O(2) consumption within the electron transport chain may contribute to this inertia. This investigation tested the hypothesis that a reduction or removal of any such NO effect via infusion of N(omega)-nitro-L-arginine methyl ester (L-NAME; a NOS inhibitor) would speed V(O(2)) kinetics at the onset of moderate exercise. Five Thoroughbred geldings underwe...
Paranasal meningioma in a horse. Kreeger JM, Templer A, Tumquist SE, Bailey KL, Johnson PJ, Wilson DA.Paranasal meningioma was diagnosed in a 5-year-old Appaloosa gelding. The mass occupied the right maxillary, frontal, and sphenopalatine sinuses but did not invade the calvarium. The diagnosis was based on histologic evaluation, positive immunohistochemical staining for vimentin and cytokeratin, and ultrastructural features including the presence of interdigitating spindle cells with numerous desmosomes.
Computer simulations to determine the efficacy of different genome resource banking strategies for maintaining genetic diversity.
Cryobiology    August 2, 2002   Volume 44, Issue 2 122-131 doi: 10.1016/s0011-2240(02)00013-5
Harnal VK, Wildt DE, Bird DM, Monfort SL, Ballou JD.Genome resource banks (GRBs) and assisted reproductive techniques are increasingly recognized as useful tools for the management and conservation of biodiversity, including endangered species. Cryotechnology permits long-term storage of valuable genetic material. Although, the actual application to endangered species management requires technical knowledge about sperm freezing and thawing, a systematic understanding of the quantitative impacts of various germ plasm storage and use scenarios is also mandatory. In this study, various GRB strategies were analyzed using the historical data from th...
Evaluation of factors affecting individual assignment precision using microsatellite data from horse breeds and simulated breed crosses.
Animal genetics    July 26, 2002   Volume 33, Issue 4 264-270 doi: 10.1046/j.1365-2052.2002.00868.x
Bjørnstad G, Røed KH.Assignment tests have been utilized to investigate population classification, measure genetic diversity and to solve forensic questions. Using microsatellite data from 26 loci genotyped in eight horse breeds we examined how population differentiation, number of scored loci, number of scored animals per breed and loci variability affected individual assignment precision applying log likelihood methods. We found that both genetic differentiation and number of scored loci were highly important for recognizing the breed of origin. When comparing two and two breeds, a proportion of 95% of the most ...
A PCR-RFLP for KIT associated with tobiano spotting pattern in horses.
Animal genetics    July 26, 2002   Volume 33, Issue 4 301-303 doi: 10.1046/j.1365-2052.2002.00854.x
Brooks SA, Terry RB, Bailey E.An MspI polymorphism was identified in intron 13 of the equine homologue of proto-oncogene c-kit (KIT) by comparing DNA sequences from horses with solid coat colour and horses homozygous for the tobiano spotting (To) gene. The allele associated with solid coat colour was designated KM0, while the allele associated with the tobiano pattern created an additional MspI restriction site and was designated KM1. Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) studies using DNA from hair follicles demonstrated that all 129 of 129 tobiano patterned horses possessed the KM1...
History and integrity of thoroughbred dam lines revealed in equine mtDNA variation.
Animal genetics    July 26, 2002   Volume 33, Issue 4 287-294 doi: 10.1046/j.1365-2052.2002.00870.x
Hill EW, Bradley DG, Al-Barody M, Ertugrul O, Splan RK, Zakharov I, Cunningham EP.Mitochondrial DNA (mtDNA) D-loop sequences (381 bp) from 100 thoroughbreds in 19 of the most common matrilineal female families were used to reconstruct a founder female population for the thoroughbred ( approximately 1650-1750 AD). Seventeen haplotypes were found to have contributed to the 19 female lineages. In order to place the reconstructed founder population in wider historical context, we examined, using both single strand conformation polymorphism and direct sequence analysis, variation in a 343 bp mtDNA fragment in that population and 13 other horse populations of disparate provenance...
Genetic diversity of Cheju horses (Equus caballus) determined by using mitochondrial DNA D-loop polymorphism.
Biochemical genetics    July 26, 2002   Volume 40, Issue 5-6 175-186 doi: 10.1023/a:1015884125507
Yang YH, Kim KI, Cothran EG, Flannery AR.We used sequence polymorphism of the mitochondrial DNA D-loop (968 bp excluding the tandem repeat region) to determine genetic diversity of horses inhabiting Cheju (a southern island of Korea). Seventeen haplotypes with frequencies from 1.5 to 21.5% were found among 65 Cheju horse samples. Genetic diversity (h) of the 17 haplotypes was calculated to be 0.91, indicating that the extant Cheju horse population consists of diverse genetic groups in their maternal lineage. Phylogenetic analysis showed that 17 types of Cheju (D-loop sequences determined), 5 Mongolian, 6 Arabian, 3 Belgian, 2 Tsushim...
Expression of interleukin-1 (IL-1) system genes in equine cumulus-oocyte complexes and influence of IL-1beta during in vitro maturation.
Biology of reproduction    July 24, 2002   Volume 67, Issue 2 630-636 doi: 10.1095/biolreprod67.2.630
Martoriati A, Lalmanach AC, Goudet G, Gérard N.A growing body of evidence suggests that the ovary is a site of inflammatory reactions, and thus, ovarian cells could represent sources and targets of the interleukin-1 (IL-1) system. The aim of the present work was to investigate the expression of IL-1alpha, IL-1beta, IL-1ra, IL-1R1, and IL-1R2 genes in equine cumulus cells and oocytes. Moreover, the influence of IL-1beta on in vitro maturation of cumulus-oocytes complexes (COCs) was examined. COCs were collected using ultrasound-guided follicular puncture in vivo. Oocytes and cumulus cells were isolated from preovulatory and subordinate foll...
Production of nuclear transfer horse embryos by Piezo-driven injection of somatic cell nuclei and activation with stallion sperm cytosolic extract.
Biology of reproduction    July 24, 2002   Volume 67, Issue 2 561-567 doi: 10.1095/biolreprod67.2.561
Choi YH, Love CC, Chung YG, Varner DD, Westhusin ME, Burghardt RC, Hinrichs K.We investigated the use of direct nuclear injection using the Piezo drill and activation by injection of stallion sperm cytosolic extract for production of cloned equine embryos. When metaphase II horse oocytes were injected with either of two dosages of sperm extract and cultured 20 h, similar activation rates (88% vs. 90%) and cleavage rates (49% vs. 46%) were obtained. The successful reconstruction rate of horse oocytes with horse somatic cell donor nuclei after direct injection using the Piezo drill was 82%. Four dosages of sperm extract (containing 59, 176, 293, or 1375 microg/ml protein)...
Molecular characterization of the equine AEG1 locus.
Gene    July 18, 2002   Volume 292, Issue 1-2 65-72 doi: 10.1016/s0378-1119(02)00673-x
Giese A, Jude R, Kuiper H, Piumi F, Schambony A, Guérin G, Distl O, Töpfer-Petersen E, Leeb T.Acidic epididymal glycoprotein 1 (AEG1), also called cysteine-rich secretory protein 1 (CRISP1), is a member of the CRISP protein family which is characterized by 16 conserved cysteine residues at the C-terminus. The CRISP proteins are expressed in the male genital tract and are thought to be involved in sperm-egg fusion. Therefore, their genes are of interest as candidate genes for inherited male fertility dysfunctions and as putative quantitative trait loci for male fertility traits. In this report, the cloning and DNA sequence of 90 kb of horse genomic DNA from equine chromosome 20q22 conta...
Contribution of heme-propionate side chains to structure and function of myoglobin: chemical approach by artificially created prosthetic groups.
Journal of inorganic biochemistry    July 18, 2002   Volume 91, Issue 1 94-100 doi: 10.1016/s0162-0134(02)00423-3
Hayashi T, Matsuo T, Hitomi Y, Okawa K, Suzuki A, Shiro Y, Iizuka T, Hisaeda Y, Ogoshi H.Horse heart myoglobin was reconstituted with mesohemin derivatives methylated at the 6- or 7-position to evaluate the role of the heme-6-propionate or heme-7-propionate side chain in the protein. The association and dissociation of the O(2) binding for the deoxymyoglobin with 6-methyl-7-propionate mesoheme are clearly accelerated. Furthermore, the myoglobin with 6-methyl-7-propionate mesoheme shows fast autoxidation from oxymyoglobin to metmyoglobin compared to the myoglobin with 6-propionate-7-methyl heme and the reference protein. These results indicate the 6-propionate plays an important ph...
Two bi-allelic single nucleotide polymorphisms within the promoter region of the horse tumour necrosis factor alpha gene.
European journal of immunogenetics : official journal of the British Society for Histocompatibility and Immunogenetics    July 18, 2002   Volume 29, Issue 4 285-286 doi: 10.1046/j.1365-2370.2002.00311.x
Matiasovic J, Lukeszová L, Horín P.Primers based on GenBank sequences within the 5' untranslated region (UTR) of the human and horse tumour necrosis factor alpha (TNF-alpha) genes were designed and used to amplify a 522-bp product. Sequencing of five clones derived from five independent PCRs obtained from three different animals of three different breeds (Old Kladruber, Akhal-Teke and Shetland Pony) revealed a high level of sequence identity to the TNF-alpha promoter regions of other species. The existing GenBank horse sequences were confirmed and extended upstream by 230 nucleotides. Based on the sequence obtained, a new horse...
Mitochondrial DNA and the origins of the domestic horse.
Proceedings of the National Academy of Sciences of the United States of America    July 18, 2002   Volume 99, Issue 16 10905-10910 doi: 10.1073/pnas.152330099
Jansen T, Forster P, Levine MA, Oelke H, Hurles M, Renfrew C, Weber J, Olek K.The place and date of the domestication of the horse has long been a matter for debate among archaeologists. To determine whether horses were domesticated from one or several ancestral horse populations, we sequenced the mitochondrial D-loop for 318 horses from 25 oriental and European breeds, including American mustangs. Adding these sequences to previously published data, the total comes to 652, the largest currently available database. From these sequences, a phylogenetic network was constructed that showed that most of the 93 different mitochondrial (mt)DNA types grouped into 17 distinct p...
Carbohydrate digestion by the horse: is it a limiting factor?
Equine veterinary journal    July 16, 2002   Volume 34, Issue 4 326-327 doi: 10.2746/042516402776249100
Buddington RK, Rashmir-Raven AM.No abstract available
Equine oocyte maturation with epidermal growth factor.
Equine veterinary journal    July 16, 2002   Volume 34, Issue 4 378-382 doi: 10.2746/042516402776249065
Lorenzo PL, Liu IK, Carneiro GF, Conley AJ, Enders AC.Epidermal growth factor (EGF) has been shown to have a positive effect during oocyte in vitro maturation in several species. This study was performed to establish the capacity of equine oocytes to undergo nuclear maturation in the presence of EGF and to localise its receptor in the equine ovary by immunohistochemical methods. Oocytes were obtained by aspiration and subsequent scraping from equine follicles (15-25 mm diameter) and cultured in 3 different treatment groups for 36 h: control Group (modified TCM 199 with 0.003% BSA), EGF Group (TCM-199 supplemented with 50 ng/ml EGF) and EMS Group ...
Equine immunology: offspring of the serum horse.
Trends in immunology    July 10, 2002   Volume 23, Issue 5 223-225 doi: 10.1016/s1471-4906(02)02193-2
Steinbach F, Deeg C, Mauel S, Wagner B.No abstract available
Transforming growth factor-beta levels during second- intention healing are related to the different course of wound contraction in horses and ponies.
Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society    July 9, 2002   Volume 10, Issue 3 188-194 doi: 10.1046/j.1524-475x.2002.10608.x
van den Boom R, Wilmink JM, O'Kane S, Wood J, Ferguson MW.Wound healing in horses is often complicated by wound infection, exuberant granulation tissue, and hypertrophic scars, especially when wounds are located on the limbs. Wound healing in ponies is less problematic, characterized by a greater degree of wound contraction and a more intense initial inflammatory response. Because both processes are influenced by transforming growth factor-beta (TGF-beta), it was hypothesized that the better wound healing in ponies was associated with different TGF-beta profiles. A series of small wounds was created on the distal limbs and hindquarters of ponies and ...
Evolution of the six horse IGHG genes and corresponding immunoglobulin gamma heavy chains.
Immunogenetics    July 4, 2002   Volume 54, Issue 5 353-364 doi: 10.1007/s00251-002-0458-4
Wagner B, Greiser-Wilke I, Wege AK, Radbruch A, Leibold W.It is generally assumed that the different mammalian IgG isotypes have developed during evolution by duplications of a common ancestor gamma heavy chain constant region gene (IGHG). In contrast to other species studied so far, which express between one and four IGHG genes, the horse (Equus caballus) genome contains six IGHG genes, and it has been postulated that they all can be expressed. For determination of the evolutionary history of the six horse IGHG genes, genomic DNA and cDNA of the IGHG genes were sequenced. The structure of these genes with reference to exons and introns was determine...
Complete coding sequence of equine inducible nitric oxide synthase.
Research in veterinary science    June 22, 2002   Volume 72, Issue 3 245 doi: 10.1053/rvsc.2002.0549
Hammond RA, Flower RJ, Bryant CE.THE gene encoding equine inducible nitric oxide synthase (iNOS) was cloned and sequenced. The strategy consisted of the amplification by PCR of message isolated from primary cultures of equine articular chondrocytes (Frean et al 1997) treated with 100 mg mlÿ1 LPS (Escherichia coli serotype O127:B8). PCR primer pairs were generated by comparison of cross-species published iNOS nucleotide sequences. The sequences of the 30 and 50 termini were derived by the generation of PCR products spanning those regions. The assembly of sequenced PCR fragments revealed a 3930 complete nucleotide sequence wit...
Case report on abnormal progesterone pattern in a mare showing oestrus during the breeding season.
Acta veterinaria Scandinavica    June 20, 2002   Volume 43, Issue 1 57-61 
Dalin AM, Andresen Ø, Malmgren L.No abstract available
Discriminant and multiple regression analysis of anemia and opportunistic infection in Fell pony foals.
Veterinary clinical pathology    June 19, 2002   Volume 29, Issue 3 84-86 doi: 10.1111/j.1939-165x.2000.tb00408.x
Dixon JB, Savage M, Wattret A, Taylor P, Ross G, Carter SD, Kelly DF, Haywood S, Phythian C, Macintyre AR, Bell SC, Knottenbelt DC, Green JR.A condition resembling acquired immunodeficiency with anemia has been described in British Fell pony foals. The pathogenesis is unknown. The present study involved 322 foals of which 164 were of Fell breed and 12 were affected. Discriminant and multiple regression analyses were used to test the results of all clinical pathology parameters from these foals for statistical association with (1) breed origin and (2) presence of disease. Only hematocrit associated significantly with presence of disease. However, significant associations were found with Fell breed origin, including serum albumin con...