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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
“Equine basal cell tumors: 6 cases (1985-1999)”.
Journal of veterinary internal medicine    October 13, 2001   Volume 15, Issue 5 425 doi: 10.1892/0891-6640(2001)15<425:c>2.0.co;2
Madewell BR, Gandour-Edwards R, Theon AP.No abstract available
Calcium sensitivity of force production and myofibrillar ATPase activity in muscles from Thoroughbreds with recurrent exertional rhabdomyolysis.
American journal of veterinary research    October 11, 2001   Volume 62, Issue 10 1647-1652 doi: 10.2460/ajvr.2001.62.1647
Mlekoday JA, Mickelson JR, Valberg SJ, Horton JH, Gallant EM, Thompson LV.To determine whether the basis for recurrent exertional rhabdomyolysis (RER) in Thoroughbreds lies in an alteration in the activation and regulation of the myofibrillar contractile apparatus by ionized calcium. Methods: 4 Thoroughbred mares with RER and 4 clinically normal (control) Thoroughbreds. Methods: Single chemically-skinned type-I (slow-twitch) and type-II (fast-twitch) muscle fibers were obtained from punch biopsy specimens, mounted to a force transducer, and the tensions that developed in response to a series of calcium concentrations were measured. In addition, myofibril preparation...
Nucleotide sequence and restriction fragment length polymorphisms of the equine Cvarepsilon gene.
Veterinary immunology and immunopathology    October 6, 2001   Volume 82, Issue 3-4 193-202 doi: 10.1016/s0165-2427(01)00355-5
Wagner B, Siebenkotten G, Radbruch A, Leibold W.IgE is the dominant immunoglobulin isotype involved in type I hypersensitivities in mammals. The heavy chain constant region domains of equine IgE are encoded by a single gene, the Cvarepsilon gene. By restriction analysis of cDNA from 15 unrelated horses, we have now identified two Cvarepsilon alleles, characterised by a Sma I restriction fragment length polymorphism, which we designated Cvarepsilon(a) and Cvarepsilon(b). Sequence analysis of both, Cvarepsilon(a) and Cvarepsilon(b) cDNA, showed in addition two single base exchanges resulting in two amino acid substitutions. Both sequences hav...
Detection of North American West Nile virus in animal tissue by a reverse transcription-nested polymerase chain reaction assay.
Emerging infectious diseases    October 5, 2001   Volume 7, Issue 4 739-741 doi: 10.3201/eid0704.010425
Johnson DJ, Ostlund EN, Pedersen DD, Schmitt BJ.A traditional single-stage reverse transcription-polymerase chain reaction (RT-PCR) procedure is effective in determining West Nile (WN) virus in avian tissue and infected cell cultures. However, the procedure lacks the sensitivity to detect WN virus in equine tissue. We describe an RT-nested PCR (RT-nPCR) procedure that identifies the North American strain of WN virus directly in equine and avian tissues.
Sequence conservation and antigenic variation of the structural proteins of equine rhinitis A virus.
Journal of virology    October 3, 2001   Volume 75, Issue 21 10550-10556 doi: 10.1128/JVI.75.21.10550-10556.2001
Varrasso A, Drummer HE, Huang JA, Stevenson RA, Ficorilli N, Studdert MJ, Hartley CA.The nucleotide and deduced amino acid sequences of the P1 region of the genomes of 10 independent equine rhinitis A virus (ERAV) isolates were determined and found to be very closely related. A panel of seven monoclonal antibodies to the prototype virus ERAV.393/76 that bound to nonneutralization epitopes conserved among all 10 isolates was raised. In serum neutralization assays, rabbit polyclonal sera and sera from naturally and experimentally infected horses reacted in a consistent and discriminating manner with the 10 isolates, which indicated the existence of variation in the neutralizatio...
Mapping the sequences that mediate interaction of the equine herpesvirus 1 immediate-early protein and human TFIIB.
Journal of virology    October 3, 2001   Volume 75, Issue 21 10219-10230 doi: 10.1128/JVI.75.21.10219-10230.2001
Jang HK, Albrecht RA, Buczynski KA, Kim SK, Derbigny WA, O'Callaghan DJ.The sole immediate-early (IE) gene of equine herpesvirus 1 encodes a 1,487-amino-acid (aa) regulatory phosphoprotein that independently activates expression of early viral genes. Coimmunoprecipitation assays demonstrated that the IE protein physically interacts with the general transcription factor TFIIB. Using a variety of protein-binding assays that employed a panel of IE truncation and deletion mutants expressed as in vitro-synthesized or glutathione S-transferase fusion proteins, we mapped a TFIIB-binding domain to aa 407 to 757 of the IE protein. IE mutants carrying internal deletions of ...
Influence of epidermal growth factor on mammalian oocyte maturation via tyrosine-kinase pathway.
Journal of physiology and biochemistry    October 3, 2001   Volume 57, Issue 2 15-22 
Lorenzo PL, Liu IK, Illera JC, Picazo RA, Carneiro GF, Illera MJ, Conley AJ, Enders AC, Illera M.Epidermal growth factor (EGF) has been reported to promote different functions in mammalian ovaries, including oocyte maturation. The aim of the present study was to establish: that EGF influences oocyte maturation in ovine and equine, that a tyrosine kinase-dependent intracellular mechanism mediates EGF effect and, that EGF-R receptor is detectable in ovarian follicles by immunohistochemistry methods. Selected ovine and equine oocytes were aspirated from 2-5 mm (ovine) or 25 mm (equine) follicles and cultured in TCM 199 for 22 (ovine) or 36 hours (equine). They are then subjected to culture w...
Immortalization of equine trophoblast cell lines of chorionic girdle cell lineage by simian virus-40 large T antigen.
The Journal of endocrinology    September 27, 2001   Volume 171, Issue 1 45-55 doi: 10.1677/joe.0.1710045
Thway TM, Clay CM, Maher JK, Reed DK, McDowell KJ, Antczak DF, Eckert RL, Nilson JH, Wolfe MW.Immortalized cell lines have many potential experimental applications including the analysis of molecular mechanisms underlying cell-specific gene expression. We have utilized a recombinant retrovirus encoding the simian virus-40 (SV-40) large T antigen to construct several immortalized cell lines of equine chorionic girdle cell lineage - the progenitor cells that differentiate into the equine chorionic gonadotropin (eCG) producing endometrial cups. Morphologically, the immortalized cell lines appear similar to normal chorionic girdle cells. Derivation of the immortalized cell lines from a cho...
Hypertrophic pulmonary osteopathy associated with granular cell tumour in a mare.
The Veterinary record    September 26, 2001   Volume 149, Issue 10 307-308 doi: 10.1136/vr.149.10.307
Heinola T, Heikkilä M, Ruohoniemi M, Sukura A.No abstract available
Genetic variation in the feral horses of the Namib Desert, Namibia.
Journal of the South African Veterinary Association    September 21, 2001   Volume 72, Issue 1 18-22 doi: 10.4102/jsava.v72i1.603
Cothran EG, van Dyk E, van der Merwe FJ.Genetic variation at 7 blood-group and 10 biochemical genetic loci was examined in 30 horses from a feral herd from the Namib Desert of Namibia, Africa. The observed genetic variability was extremely low compared with that found in domestic horse breeds. The low variation was most probably a result of recent small population size and a small founding population size. Genetic comparison of the Namib horses, which were of unknown origins, to domestic horse breeds, showed that the Namib horses had the highest genetic similarity to Arabian type horses, although they did not closely resemble this t...
A partially unfolded state of equine beta-lactoglobulin at pH 8.7.
Journal of protein chemistry    September 21, 2001   Volume 20, Issue 2 131-137 doi: 10.1023/a:1011029524100
Fujiwara K, Ikeguchi M, Sugai S.The urea-induced unfolding transition of equine beta-lactoglobulin was studied at pH 8.7 using circular dichroism (CD), ultracentrifugation, and gel filtration chromatography. The unfolding transition curves showed that at least one intermediate accumulates at moderate concentrations of urea. Furthermore, analytical ultracentrifugation experiments indicated that the intermediate forms a dimer. Thus, the urea-induced unfolding transition was measured by CD at various protein concentrations and was analyzed by a model assuming the four conformational states (the native, intermediate, dimeric int...
Theriogenology question of the month. X-chromosome monosomy (XO syndrome).
Journal of the American Veterinary Medical Association    September 20, 2001   Volume 219, Issue 6 751-752 doi: 10.2460/javma.2001.219.751
Kutzler MA.No abstract available
X chromosome detection in an XO mare using a human X paint probe, and PCR detection of SRY and amelogenin genes in 3 XY mares.
Equine veterinary journal    September 18, 2001   Volume 33, Issue 5 527-530 doi: 10.2746/042516401776254844
Mäkinen A, Suojala L, Niini T, Katila T, Tozaki T, Miyake Y, Hasegawa T.No abstract available
Genetic diversity in Spanish donkey breeds using microsatellite DNA markers.
Genetics, selection, evolution : GSE    September 18, 2001   Volume 33, Issue 4 433-442 doi: 10.1186/1297-9686-33-4-433
Aranguren-Méndez J, Jordana J, Gomez M.Genetic diversity at 13 equine microsatellite loci was compared in five endangered Spanish donkey breeds: Andaluza, Catalana, Mallorquina, Encartaciones and Zamorano-Leonesa. All of the equine microsatellites used in this study were amplified and were polymorphic in the domestic donkey breeds with the exception of HMS1, which was monomorphic, and ASB2, which failed to amplify. Allele number, frequency distributions and mean heterozygosities were very similar among the Spanish donkey breeds. The unbiased expected heterozygosity (H(E)) over all the populations varied between 0.637 and 0.684 in t...
Differences in wound contraction between horses and ponies: the in vitro contraction capacity of fibroblasts.
Equine veterinary journal    September 18, 2001   Volume 33, Issue 5 499-505 doi: 10.2746/042516401776254817
Wilmink JM, Nederbragt H, van Weeren PR, Stolk PW, Barneveld A.The contribution of wound contraction to wound closure determines the speed of second intention wound healing and it has been shown that significant differences exist with regard to both contraction and inflammatory response between horses and ponies and between various areas of the body. In this study, the contraction capacity of fibroblasts from limbs and buttocks of 4 Dutch Warmblood horses and 4 Shetland ponies was studied in vitro, in order to determine whether differences in wound contraction are due to differences in the inherent contraction capacity of the fibroblasts or to differences...
Identification and characterisation of beta-adrenoceptors on intact equine peripheral blood lymphocytes with the radioligand (-)-[125I]-iodocyanopindolol.
Equine veterinary journal    September 18, 2001   Volume 33, Issue 5 487-493 doi: 10.2746/042516401776254862
Abraham G, Broddet OE, Ungemach FR.In this study, beta-adrenoceptors of intact equine lymphocytes were identified and subclassified by (-)-[125I]-iodocyanopindolol (ICYP) binding. ICYP binding to intact equine lymphocytes was rapid, saturable (maximal number of binding sites 320 +/- 20 ICYP binding sites/cell, n = 12) and of high affinity (KD value for ICYP 14.4 +/- 1.7 pmol/l, n = 12). Binding was stereospecific as shown by the 10 times greater potency of (-)-propranolol to inhibit binding than its (+)-isomer. Beta-adrenoceptor agonists inhibited ICYP binding with an order of potency: (-)-isoprenaline >(-)-adrenaline >(-...
Organisation of the cytoskeleton during in vitro maturation of horse oocytes.
Molecular reproduction and development    September 13, 2001   Volume 60, Issue 2 260-269 doi: 10.1002/mrd.1086
Tremoleda JL, Schoevers EJ, Stout TA, Colenbrander B, Bevers MM.Meiotic maturation of mammalian oocytes is a complex process during which microfilaments and microtubules provide the framework for chromosomal reorganisation and cell division. The aim of this study was to use fluorescence and confocal laser scanning microscopy to examine changes in the distribution of these important cytoskeletal elements and their relationship to chromatin configuration during the maturation of horse oocytes in vitro. Oocytes were cultured in M199 supplemented with pFSH and eLH and, at 0, 12, 24, and 36 hr after the onset of culture, they were fixed for immunocytochemistry ...
Influence of oocyte collection technique on initial chromatin configuration, meiotic competence, and male pronucleus formation after intracytoplasmic sperm injection (ICSI) of equine oocytes.
Molecular reproduction and development    September 11, 2001   Volume 60, Issue 1 79-88 doi: 10.1002/mrd.1064
Dell'Aquila ME, Masterson M, Maritato F, Hinrichs K.There is a great variability in the success of horse oocyte maturation and fertilization among laboratories. This study was conducted to determine if the meiotic and developmental competence of horse oocytes could be dependent on the method of oocyte collection, i.e., aspiration of follicular fluid with a vacuum apparatus, or opening follicles and scraping the granulosa layer. Horse oocytes were recovered from abattoir ovaries by aspiration or scraping and classified as having compact (Cp), expanded (Ex), or partial (P) cumuli. In Experiment 1 (Part A in May and Part B in October), oocytes wer...
[The phylogenesis of equine teeth].
Anatomia, histologia, embryologia    September 6, 2001   Volume 30, Issue 4 237-248 doi: 10.1046/j.1439-0264.2001.00328.x
Vollmerhaus B, Knospe C, Roos H.Phylogenetic research on the teeth of equidae beginning with dagger Hyracotherium ('Eohippus') will be summarized, subdivided into its components, analysed in a new way and finally interpreted according to several theories of evolution. In this context, specific cells (ameloblasts, odontoblasts, cementoblasts) are discussed and valued according to Preuss (1987) as active carriers of the evolution of teeth.
Evidence that Equine rhinitis A virus VP1 is a target of neutralizing antibodies and participates directly in receptor binding.
Journal of virology    September 5, 2001   Volume 75, Issue 19 9274-9281 doi: 10.1128/JVI.75.19.9274-9281.2001
Warner S, Hartley CA, Stevenson RA, Ficorilli N, Varrasso A, Studdert MJ, Crabb BS.Equine rhinitis A virus (ERAV) is a respiratory pathogen of horses and is classified as an Aphthovirus, the only non-Foot-and-mouth disease virus (FMDV) member of this genus. In FMDV, virion protein 1 (VP1) is a major target of protective antibodies and is responsible for viral attachment to permissive cells via an RGD motif located in a distal surface loop. Although both viruses share considerable sequence identity, ERAV VP1 does not contain an RGD motif. To investigate antibody and receptor-binding properties of ERAV VP1, we have expressed full-length ERAV VP1 in Escherichia coli as a glutat...
The Horse Gene Map.
ILAR journal    August 31, 2001   Volume 39, Issue 2-3 171-176 doi: 10.1093/ilar.39.2-3.171
Bailey E, Binns MM.No abstract available
Chromosome homologies between man and mountain zebra (Equus zebra hartmannae) and description of a new ancestral synteny involving sequences homologous to human chromosomes 4 and 8.
Cytogenetics and cell genetics    August 31, 2001   Volume 93, Issue 3-4 291-296 doi: 10.1159/000057000
Richard F, Messaoudi C, Lombard M, Dutrillaux B.Using human chromosome painting probes, we looked for homologies between human and mountain zebra (Equus zebra hartmannae, Equidae, Perissodactyla) karyotypes. Except for two very short segments, all euchromatic regions were found to have a human homologous chromosome segment. Conserved syntenies previously described in various mammalian orders were detected. Each synteny corresponded to a chromosomal region homologous to two parts of human chromosomes: HSA3 and HSA21, HSA7 and HSA16, HSA12 and HSA22, and HSA16 and HSA19. Chromosomal segments homologous to a part of HSA11 and HSA19p are found ...
Systemic relaxin in pregnant pony mares grazed on endophyte-infected fescue: effects of fluphenazine treatment.
Theriogenology    August 23, 2001   Volume 56, Issue 3 471-483 doi: 10.1016/s0093-691x(01)00578-7
Ryan PL, Bennett-Wimbush K, Vaala WE, Bagnell CA.Tall fescue is one of the most widely grown forage grasses for horses in the United States. However, it is frequently infected with the endophyte Neotyphodium coenophialum which produces ergot alkaloids that cause severe adverse effects in the pregnant mare. The objectives of this study were to determine the effects of fescue toxicosis and fluphenazine on circulating relaxin in pregnant pony mares and evaluate the usefulness of relaxin as a monitor of treatment efficacy. Twelve mares were maintained on endophyte-infected tall fescue pasture. Group TRT (n = 6), received 25 mg of fluphenazine de...
Mares with delayed uterine clearance have an intrinsic defect in myometrial function.
Biology of reproduction    August 22, 2001   Volume 65, Issue 3 740-747 doi: 10.1095/biolreprod65.3.740
Rigby SL, Barhoumi R, Burghardt RC, Colleran P, Thompson JA, Varner DD, Blanchard TL, Brinsko SP, Taylor T, Wilkerson MK, Delp MD.Persistent, postmating endometritis affects approximately 15% of mares and results in reduced fertility and sizable economic losses to the horse-breeding industry. Mares that are susceptible to postmating endometritis have delayed uterine clearance associated with reduced uterine contractility. Unfortunately, the mechanism for reduced uterine contractility remains an enigma. The present study examined the hypothesis that mares with delayed uterine clearance have an intrinsic contractile defect of the myometrium. Myometrial contractility was evaluated in vitro by measuring isometric tension gen...
The novel picornavirus Equine rhinitis B virus contains a strong type II internal ribosomal entry site which functions similarly to that of Encephalomyocarditis virus.
The Journal of general virology    August 22, 2001   Volume 82, Issue Pt 9 2257-2269 doi: 10.1099/0022-1317-82-9-2257
Hinton TM, Crabb BS.Equine rhinitis B virus (ERBV) has recently been classified as an Erbovirus, a new genus in the Picornaviridae family. ERBV is distantly related to members of the Cardiovirus and Aphthovirus genera which utilize a type II internal ribosome entry sequence (IRES) to initiate translation. We show that ERBV also possesses the core stem-loop structures (H-L) of a type II IRES. The function of the ERBV IRES was characterized using bicistronic plasmids that were analysed both by transfection into BHK-21 cells and by in vitro transcription and translation in rabbit reticulocyte lysates. In both system...
Solution NMR determination of the seating(s) of meso-nitro-etioheme-1 in myoglobin: implications for steric constraints to meso position access in heme degradation by coupled oxidation.
Journal of the American Chemical Society    August 17, 2001   Volume 123, Issue 33 8080-8088 doi: 10.1021/ja010651a
Wang J, Li Y, Ma D, Kalish H, Balch AL, La Mar GN.The highly stereoselective cleavage of hemin in myoglobin by coupled oxidation has been attributed to steric barriers that leave more space near the alpha- than the other meso-positions. The steric barriers near meso positions in myoglobin have been investigated by establishing the thermodynamics and dynamics of possible seatings in the pocket of horse myoglobin of a four-fold symmetric etioheme I modified with a bulky nitro group at a single meso position. The cyanomet complex of this reconstituted myoglobin exhibits three sets of (1)H NMR resonances that are linked dynamically and occur in a...
Cytochrome c reconstituted from two peptide fragments displays native-like redox properties.
European journal of biochemistry    August 15, 2001   Volume 268, Issue 16 4537-4543 doi: 10.1046/j.1432-1327.2001.02373.x
Sinibaldi F, Fiorucci L, Mei G, Ferri T, Desideri A, Ascoli F, Santucci R.Recombination of two fragments of horse cytochrome c (the heme-containing N-fragment, residues 1-56, and the C-fragment, residues 57-104), which are substantially unstructured at neutral pH, gives rise to a 1:1 fragment complex with a compact conformation, in which the alpha helical structure and the native Met80-Fe(III) axial bond are recovered. With respect to the native protein, the ferric complex shows a less rigid atomic packing and a decreased stability [Delta(DeltaG(o))D = 14.7 kJ.mol(-1)], ascribed to perturbations involving the Trp59 microenvironment and, to a lower extent, the heme p...
Seasonal analysis of the number of aeropiles in Anocentor nitens (Neumann, 1897) (Acari: Ixodidae) from the State of Rio de Janeiro, Brazil.
Memorias do Instituto Oswaldo Cruz    August 14, 2001   Volume 96, Issue 5 733-736 doi: 10.1590/s0074-02762001000500028
Gazêta GS, Guerim L, Amorim M, Serra-Freire NM.Variation between aeropile numbers of the right and left peritrematic plate in male and female Anocentor nitens (Neumann, 1897) is reported from a site in Brazil. From January to December 1998, 146 males and 247 females of A. nitens were recovered from Equus caballus L. in Silva Jardim District, State of Rio de Janeiro. Asymmetry of numbers of aeropiles between right and left plates occurred in 83.6% of the males and 82.2% of the females. Differences in the number of aeropiles between the sexes were not significant. Quantitative variation of aeropiles was correlated to the period of recovery, ...
Borna disease: virus-induced neurobehavioral disease pathogenesis.
Current opinion in microbiology    August 10, 2001   Volume 4, Issue 4 467-475 doi: 10.1016/s1369-5274(00)00237-x
Carbone KM, Rubin SA, Nishino Y, Pletnikov MV.Studies of the pathogenesis of neurobehavioral diseases following Borna disease virus infections have been increasing rapidly over the past ten years. Recent major advances have included a report of vertical transmission of the virus in its natural host, the horse, and a report of isolation of a novel variant, No/98, in that same species. In rats infected neonatally with the Borna disease virus that lack blood-borne inflammation in the brain, evidence of an "endogenous" brain inflammatory response is abundant, with elevated expression of cytokine and chemokine mRNA. Infection in these rats is ...
Cytogenetic assignment and genetic characterization of the horse microsatellites, TKY4-18, TKY20, TKY22-24, TKY30-41 derived from a cosmid library.
Animal genetics    August 9, 2001   Volume 32, Issue 3 160-162 doi: 10.1046/j.1365-2052.2001.0723a.x
Hirota K, Tozaki T, Mashima S, Miura N.No abstract available