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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
The influence of birth weight, rate of weight gain and final achieved height and sex on the development of osteochondrotic lesions in a population of genetically predisposed Warmblood foals.
Equine veterinary journal. Supplement    September 22, 2000   Issue 31 26-30 doi: 10.1111/j.2042-3306.1999.tb05310.x
van Weeren PR, Sloet van Oldruitenborgh-Ooste , Barneveld A.The influence of inherent variables (sex, birth weight, final achieved height, monthly weight gain rates and osteochondrosis (OC) status of the parents) on the occurrence of osteochondrotic lesions in the femoropatellar and tarsocrural joints in a group of foals was investigated as part of a research project aimed at the study of the development of osteochondrosis and the influence of exercise on the development of the musculoskeletal system in Warmbloods. The foals were genetically predisposed to develop OC, being offspring of sires that all had radiographically proven OC in either the femoro...
Radiographic development of osteochondral abnormalities, in the hock and stifle of Dutch Warmblood foals, from age 1 to 11 months.
Equine veterinary journal. Supplement    September 22, 2000   Issue 31 9-15 doi: 10.1111/j.2042-3306.1999.tb05308.x
Dik KJ, Enzerink E, van Weeren PR.In a longitudinal study the hocks and stifles of Dutch Warmblood foals were radiographed at age 1 month and subsequently at intervals of 4 weeks. Forty-three foals were radiographed until age 5 months and 19 foals until age 11 months. The chance for the development of osteochondrosis was enhanced by using only offspring from diseased sires with radiographically proven OC at either the intermediate ridge of the distal tibia or the lateral ridge of the femoral trochlea. The radiographic appearances of the intermediate ridge of the distal tibia, the distal aspect of the lateral trochlear ridge of...
Conclusions regarding the influence of exercise on the development of the equine musculoskeletal system with special reference to osteochondrosis.
Equine veterinary journal. Supplement    September 22, 2000   Issue 31 112-119 doi: 10.1111/j.2042-3306.1999.tb05323.x
Barneveld A, van Weeren PR.This paper summarises and interrelates the findings of a large-scale multidisciplinary investigation to assess the influence of exercise on the development of the equine musculoskeletal system in general and of osteochondrosis in particular, up to age 5 months. Forty-three foals, genetically predisposed to develop OC, were divided into 3 exercise groups: box-rest, box-rest with training and free pasture exercise. At 5 months, all foals were weaned and 8 foals per group were subjected to euthanasia for postmortem examination. The remaining 19 foals were placed together and subjected to euthanas...
Theriogenology question of the month. Azoospermia attributable to bilateral epididymal hypoplasia.
Journal of the American Veterinary Medical Association    September 21, 2000   Volume 217, Issue 6 825-826 doi: 10.2460/javma.2000.217.825
Blanchard TL, Woods JA, Brinsko SP.No abstract available
Vitrification of immature and mature equine and bovine oocytes in an ethylene glycol, ficoll and sucrose solution using open-pulled straws.
Theriogenology    September 16, 2000   Volume 54, Issue 1 119-128 doi: 10.1016/s0093-691x(00)00330-7
Hurtt AE, Landim-Alvarenga F, Seidel GE, Squires EL.Studies were conducted to compare viability of immature and mature equine and bovine oocytes vitrified in ethylene glycol. Ficoll using open-pulled straws. Oocytes from slaughterhouse ovaries (N=50/group) with >2 layers of compact cumulus cells were vitrified immediately after collection (immature groups) or vitrified after 36 to 40 (equine) or 22 to 24 (bovine) h of maturation (mature groups). Immature oocytes were matured after thawing. Before vitrification, oocytes were exposed to TCM-199 + 10 FCS + 2.5 M ethylene glycol + 18% Ficoll + 0.5 M sucrose (EFS) for 30 sec and then to 5 M ethylene...
Animal models of asthma: potential usefulness for studying health effects of inhaled particles.
Inhalation toxicology    September 16, 2000   Volume 12, Issue 9 829-862 doi: 10.1080/08958370050123207
Bice DE, Seagrave J, Green FH.Asthma is now recognized to be a chronic inflammatory disease that affects the whole lung. Incidence appears to be increasing despite improved treatment regimens. There is substantial epidemiological evidence suggesting a relationship between the incidence and severity of asthma (e.g., hospitalizations) and exposure to increased levels of air pollution, especially fine and ultrafine particulate material, in susceptible individuals. There have been a few studies in animal models that support this concept, but additional animal studies to test this hypothesis are needed. However, such studies mu...
Efficient homologous RNA recombination and requirement for an open reading frame during replication of equine arteritis virus defective interfering RNAs.
Journal of virology    September 12, 2000   Volume 74, Issue 19 9062-9070 doi: 10.1128/jvi.74.19.9062-9070.2000
Molenkamp R, Greve S, Spaan WJ, Snijder EJ.Equine arteritis virus (EAV), the prototype arterivirus, is an enveloped plus-strand RNA virus with a genome of approximately 13 kb. Based on similarities in genome organization and protein expression, the arteriviruses have recently been grouped together with the coronaviruses and toroviruses in the newly established order Nidovirales. Previously, we reported the construction of pEDI, a full-length cDNA copy of EAV DI-b, a natural defective interfering (DI) RNA of 5.6 kb (R. Molenkamp et al., J. Virol. 74:3156-3165, 2000). EDI RNA consists of three noncontiguous parts of the EAV genome fused ...
Effect of transforming growth factor beta1 on chondrogenic differentiation of cultured equine mesenchymal stem cells.
American journal of veterinary research    September 8, 2000   Volume 61, Issue 9 1003-1010 doi: 10.2460/ajvr.2000.61.1003
Worster AA, Nixon AJ, Brower-Toland BD, Williams J.To determine the morphologic and phenotypic effects of transforming growth factor beta1 (TGFbeta1) on cultured equine mesenchymal stem cells (MSC) and articular chondrocytes. Methods: Bone marrow aspirates and articular cartilage samples from a 2-year-old and two 8-month-old horses. Methods: After initial isolation and culture, MSC and chondrocytes were cultured in Ham's F-12 medium supplemented with TGF-beta1 at a concentration of 0, 1, 5, or 10 ng/ml. Medium was exchanged on day 2, and cells were harvested on day 4. Medium was assayed for proteoglycan (PG) content. Total RNA was isolated fro...
Cloning and sequencing of the horse and sheep high-affinity IgE receptor alpha chain cDNA.
Immunogenetics    September 2, 2000   Volume 51, Issue 10 878-881 doi: 10.1007/s002510000200
McAleese SM, Halliwell RE, Miller HR.No abstract available
Stannard’s Illustrated Equine Dermatology Notes – an introduction.
Veterinary dermatology    September 1, 2000   Volume 11, Issue 3 161-162 doi: 10.1046/j.1365-3164.2000.00220.x
Von Tscharner , Kunkle , Yager .No abstract available
A horse whole-genome-radiation hybrid panel: chromosome 1 and 10 preliminary maps.
Mammalian genome : official journal of the International Mammalian Genome Society    September 1, 2000   Volume 11, Issue 9 803-805 doi: 10.1007/s003350010146
Kiguwa SL, Hextall P, Smith AL, Critcher R, Swinburne J, Millon L, Binns MM, Goodfellow PN, McCarthy LC, Farr CJ, Oakenfull EA.No abstract available
Genomic variability of equine herpesvirus-5.
Archives of virology    August 30, 2000   Volume 145, Issue 7 1359-1371 doi: 10.1007/s007050070095
Dunowska M, Holloway SA, Wilks CR, Meers J.Seventeen New Zealand isolates of equine herpesvirus 5 (EHV-5) were compared to the Australian prototype strain. PCR primers were designed to amplify EHV-5 glycoprotein B (gB) gene, and Restriction Fragment Length Polymorphism (RFLP) was used to detect differences between cloned PCR products. EHV-5 isolates from different horses showed a high degree of heterogeneity. However, EHV-5 isolates from individual horses remained homogeneous when examined over a period of time or isolated from different sites. A single EHV-5 gB RFLP profile was detected in isolates from each individual horse but one. ...
Secondary structure model for the ITS-2 precursor rRNA of strongyloid nematodes of equids: implications for phylogenetic inference.
International journal for parasitology    August 29, 2000   Volume 29, Issue 12 1949-1964 doi: 10.1016/s0020-7519(99)00155-1
Hung GC, Chilton NB, Beveridge I, Gasser RB.In order to maximise the positional homology in the primary sequence alignment of the second internal transcribed spacer for 30 species of equine strongyloid nematodes, the secondary structures of the precursor ribosomal RNA were predicted using an approach combining an energy minimisation method and comparative sequence analysis. The results indicated that a common secondary structure model of the second internal transcribed spacer of these nematodes was maintained despite significant interspecific differences (2-56%) in primary sequences. The secondary structure model was then used to refine...
Closure of the abdominal wall at the umbilicus and the development of umbilical hernias in a group of foals from birth to 11 months of age.
The Veterinary record    August 24, 2000   Volume 147, Issue 2 37-39 doi: 10.1136/vr.147.2.37
Enzerink E, van Weeren PR, van der Velden MA.The closure of the body wall defect at the umbilicus was studied in relation to the development of umbilical hernias in a group of 44 normal foals, 25 of which were followed from birth until five months of age, and 19 from birth until 11 months of age. At birth, 19 of the foals had a defect in the body wall at the umbilicus that was termed a 'palpable umbilical ring'. In 18 of them this defect disappeared within four days, but in the other the ring did not close and a hernial sac with abdominal contents was palpable. This foal was considered to be the only foal to have a truly congenital umbil...
Two sterile stallions with XXY-syndrome.
Equine veterinary journal    August 22, 2000   Volume 32, Issue 4 358-360 doi: 10.2746/042516400777032138
Mäkinen A, Katila T, Andersson M, Gustavsson I.No abstract available
Determination of the cDNA sequence and mRNA expression of interleukin-1 receptor antagonist in horses.
American journal of veterinary research    August 22, 2000   Volume 61, Issue 8 920-924 doi: 10.2460/ajvr.2000.61.920
Dhar AK, Thompson MS, Paradis MR, Alcivar-Warren A.To determine the complementary DNA (cDNA) sequence of interleukin-1 receptor antagonist (IL-1ra) in horses and compare messenger RNA (mRNA) expression of IL-1ra among horses of various breeds. Methods: Blood samples from neonatal and adult horses examined for a variety of diseases. Methods: A polymerase chain reaction procedure was used to amplify a 220 base pair (bp) portion of the genomic DNA. The upstream and downstream regions of the cDNA sequence were determined by means of 5' and 3' rapid amplification of cDNA ends (RACE) procedures. Northern blot hybridization was used to examine steady...
Comparison of Northern blot hybridization and a reverse transcriptase-polymerase chain reaction technique for measurement of mRNA expression of metalloproteinases and matrix components in articular cartilage and synovial membrane from horses with osteoarthritis.
American journal of veterinary research    August 22, 2000   Volume 61, Issue 8 900-905 doi: 10.2460/ajvr.2000.61.900
Fehr JE, Trotter GW, Oxford JT, Hart DA.To determine relative amounts of mRNA expression of aggrecan, type-II collagen, matrix metalloproteinase (MMP) 1, and MMP3 in articular cartilage and synovial membrane samples from healthy equine joints and joints with osteoarthritis (OA) and to compare results of Northern blot hybridization with results of a reverse transcriptase-polymerase chain reaction (RT-PCR) assay. Methods: Articular cartilage samples from 8 pairs of joints (1 with OA and 1 healthy) from 6 horses and synovial membrane samples from 6 pairs of joints from 5 horses. Methods: RNA was extracted from samples by use of a modif...
Purification, characterization, and cDNA sequencing of cytosolic phospholipase A(2) from equine neutrophils.
Journal of lipid research    August 18, 2000   Volume 41, Issue 8 1222-1230 
Forsell PK, Lindberg A, Karlsson S, Lindgren JA, Claesson HE.It has been demonstrated that equine neutrophils, but not eosinophils, require exogenous arachidonic acid for calcium ionophore A23187-induced leukotriene synthesis. Because cytosolic phospholipase A(2) (cPLA(2)) plays an essential role in leukotriene formation in leukocytes, we investigated the presence of a functional cPLA(2) in equine neutrophils. To determine whether cPLA(2) from neutrophils was catalytically active, we purified the enzyme >6,500 fold with 3% recovery from equine neutrophils. The full-length cDNA sequence encoded a 749-amino acid protein. The deduced amino acid sequence...
Prevalence of selected species of internal parasites in equids at necropsy in central Kentucky (1995-1999).
Veterinary parasitology    August 11, 2000   Volume 92, Issue 1 51-62 doi: 10.1016/s0304-4017(00)00266-1
Lyons ET, Swerczek TW, Tolliver SC, Bair HD, Drudge JH, Ennis LE.A survey to determine current prevalence of several species of endoparasites in equids (n=350) at necropsy was conducted at the Livestock Disease Diagnostic Center in central Kentucky (1995-1999). Thelazia lacrymalis were found in 42% of the 1- to 4-year olds (n=132), which was the only age group examined for these parasites. Five- to 30-year olds (n=157), examined for Onchocerca spp. worms/lesions, had a prevalence of 24%. In > or =1-year olds (n=324), the infection rate for Gasterophilus intestinalis was 12% for second instars and 14% for third instars and for Gasterophilus nasalis was 2%...
Mutations occurring during serial passage of Japanese equine infectious anemia virus in primary horse macrophages.
Virus research    August 10, 2000   Volume 68, Issue 1 93-98 doi: 10.1016/s0168-1702(00)00147-7
Zheng YH, Sentsui H, Kono Y, Ikuta K.An attenuated equine infectious anemia virus (EIAV), named V26, was previously obtained after 50 passages of the Japanese virulent strain V70 in primary macrophage culture. To clarify the differences between both viruses, their full-length sequences were determined. There were higher mutations in S2 (6.15% amino acid difference) and LTR (10.7% nucleotide difference). The presumed initiation codon of the S2 gene was absent from the sequence of V26. There was a large insertion within the long-terminal repeat (LTR) U3 hypervariable region of V26. In addition, there were minor mutations in gag (1....
[Sensitivity of bovine and equine streptococci to beta-lactam antibiotics (benzylpenicillin, ampicillin, oxacillin, cefotaxime) in the agar diffusion and E-test].
Berliner und Munchener tierarztliche Wochenschrift    August 5, 2000   Volume 113, Issue 6 234-245 
Trolldenier H, Klarmann D, Krabisch P, Rohde J, Steiner A, Verspohl J.368 streptococcal strains from udder secretions of cattle (Sc. agalactiae, Sc. dysgalactiae, Sc. uberis) and 191 streptococcal isolates from horse specimens (Sc. equi ssp. zooepidemicus, Sc. equi ssp. equi) originating from different agricultural regions in Germany (Lower Saxony, in particular the region of Weser-Ems, Bavaria, Altmark) were investigated for their sensitivity to 4 beta-lactam antibiotics (benzylpenicillin, ampicillin, oxacillin, cefotaxime). Two different test methods were applied: the agar diffusion test for determination of the diameter of the zone of inhibition and the E-tes...
Utilisation of bacteriophage display libraries to identify peptide sequences recognised by equine herpesvirus type 1 specific equine sera.
Journal of virological methods    August 2, 2000   Volume 88, Issue 1 89-104 doi: 10.1016/s0166-0934(00)00183-x
Birch-Machin I, Ryder S, Taylor L, Iniguez P, Marault M, Ceglie L, Zientara S, Cruciere C, Cancellotti F, Koptopoulos G, Mumford J, Binns M....Three filamentous phage random peptide display libraries were used in biopanning experiments with purified IgG from the serum of a gnotobiotic foal infected with equine herpesvirus-1 (EHV-1) to enrich for epitopes binding to anti-EHV-1 antibodies. The sequences of the amino acids displayed were aligned with protein sequences of EHV-1, thereby identifying a number of potential antibody binding regions. Presumptive epitopes were identified within the proteins encoded by genes 7 (DNA helicase/primase complex protein), 11 (tegument protein), 16 (glycoprotein C), 41 (integral membrane protein), 70 ...
Age-related effects of TGF-beta on proteoglycan synthesis in equine articular cartilage.
Biochemical and biophysical research communications    July 29, 2000   Volume 274, Issue 2 467-471 doi: 10.1006/bbrc.2000.3167
Iqbal J, Dudhia J, Bird JL, Bayliss MT.The synthesis of proteoglycans was measured in normal equine articular cartilage of ages 9 months to 20 years and the effect of TGF-beta1 on this activity was investigated. The rate of incorporation of [(35)S]Na(2)SO(4) decreased with age as did the responsiveness of the tissue to the growth factor. The enhanced synthesis of proteoglycan induced at all ages by TGF-beta1 was down-regulated by IL-1 beta and retinoic acid. The expression of mRNA for TGF-beta1, 2, and 3 was also measured, and although the level of TGF-beta1 was highest at all ages, the expression of each growth factor decreased wi...
Insulin-like growth factor (IGF)-binding protein-4 proteolytic degradation in bovine, equine, and porcine preovulatory follicles: regulation by IGFs and heparin-binding domain-containing peptides.
Biology of reproduction    July 25, 2000   Volume 63, Issue 2 390-400 doi: 10.1095/biolreprod63.2.390
Mazerbourg S, Zapf J, Bar RS, Brigstock DR, Monget P.We recently showed that insulin-like growth factor-binding protein-4 (IGFBP-4) proteolytic degradation in ovine preovulatory ovarian follicles is IGF-dependent and regulated by the heparin-binding domain (HBD) from IGFBP-3 and from connective tissue growth factor (CTGF), heparan/heparin-interacting protein (HIP), and vitronectin. The present study investigated regulation of IGFBP-4 proteolytic degradation in porcine, bovine, and equine ovarian preovulatory follicles. Follicular fluid from such preovulatory follicles contains proteolytic activity, degrading exogenous IGFBP-4. An excess of IGF-I...
In vitro detection of equine arteritis virus from seminal plasma for identification of carrier stallions.
The Journal of veterinary medical science    July 25, 2000   Volume 62, Issue 6 643-646 doi: 10.1292/jvms.62.643
Fukunaga Y, Wada R, Sugita S, Fujita Y, Nambo Y, Imagawa H, Kanemaru T, Kamada M, Komatsu N, Akashi H.Equine arteritis virus (EAV) was readily isolated in RK-13 cell monolayers by plaque assay from seminal plasma of experimental carrier stallions when they contained high titers of virus regardless of the presence of non-viral cytotoxicity in the seminal plasma. The cytotoxicity interfered with virus isolation from seminal plasma which contained virus at titers less than 10 PFU/ml. However, it was possible to detect the virus in seminal plasma pretreated with PEG (#6000). EAV was consistently identified by RT-PCR from crude seminal plasma which contained virus at titers of more than 10(2.7) PFU...
Development of a differential multiplex PCR assay for equine herpesvirus 1 and 4 as a diagnostic tool.
Journal of veterinary medicine. B, Infectious diseases and veterinary public health    July 20, 2000   Volume 47, Issue 5 351-359 doi: 10.1046/j.1439-0450.2000.00361.x
Carvalho R, Passos LM, Martins AS.In this study, a multiplex polymerase chain reaction (PCR) procedure was developed for differentiation of strains and field isolates of equine herpesvirus type 1 (EHV-1) and type 4 (EHV-4). Specific oli-gonucleotide primers were combined to amplify the thymidine kinase (TK) gene region of EHV-1 and EHV-4, which would yield fragments of different lengths for each virus in the same amplification reaction. The specificity of the largest PCR amplicon for EHV-4 was confirmed by restriction digestion with HindIII. The multiplex PCR proved to be a fast and sensitive method for typing EHV-1 and EHV-4 ...
Characterisation of 25 new physically mapped horse microsatellite loci: AHT24++-48.
Animal genetics    July 15, 2000   Volume 31, Issue 3 237-238 
Swinburne JE, Lockhart L, Aldridge V, Marti E, Breen M, Binns MM.No abstract available
The isolation and characterization of 34 equine microsatellite loci, TKY290-TKY323.
Animal genetics    July 15, 2000   Volume 31, Issue 3 234-236 
Tozaki T, Kakoi H, Mashima S, Hirota K, Hasegawa T, Ishida N, Miura N, Tomita M.No abstract available
The equine CD74 gene has a polymorphic (CAG)n repeat in the 5′-untranslated region.
Animal genetics    July 15, 2000   Volume 31, Issue 3 239-240 
Tozaki T, Mashima S, Miura N, Tomita M.No abstract available
Differential activation of platelets from normal and allergic ponies by PAF and ADP.
Inflammation research : official journal of the European Histamine Research Society ... [et al.]    July 13, 2000   Volume 49, Issue 5 224-230 doi: 10.1007/s000110050583
Bailey SR, Andrews MJ, Elliott J, Cunningham FM.Altered platelet responsiveness has been demonstrated in human atopic dermatitis. This study has compared the in vitro function of platelets from normal ponies and those with the allergic skin disease, sweet itch. Methods: Ponies with a clinical history of sweet itch and normal ponies were used as blood donors. Methods: PAF and ADP-induced platelet aggregation was measured and TxB2 production quantitated at the time of maximal aggregation; 12-HETE was additionally measured in some samples. Agonist-induced release of 3[H]5-HT was also studied. Results: Although both PAF and ADP caused equine pl...