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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Isolation and characterization of an arterivirus defective interfering RNA genome.
Journal of virology    March 9, 2000   Volume 74, Issue 7 3156-3165 doi: 10.1128/jvi.74.7.3156-3165.2000
Molenkamp R, Rozier BC, Greve S, Spaan WJ, Snijder EJ.Equine arteritis virus (EAV), the type member of the family Arteriviridae, is a single-stranded RNA virus with a positive-stranded genome of approximately 13 kb. EAV uses a discontinuous transcription mechanism to produce a nested set of six subgenomic mRNAs from which its structural genes are expressed. We have generated the first documented arterivirus defective interfering (DI) RNAs by serial undiluted passaging of a wild-type EAV stock in BHK-21 cells. A cDNA copy of the smallest DI RNA (5.6 kb) was cloned. Upon transfection into EAV-infected BHK-21 cells, transcripts derived from this clo...
ITS-1 ribosomal DNA sequence variants are maintained in different species and strains of Echinococcus.
International journal for parasitology    March 8, 2000   Volume 30, Issue 2 157-169 doi: 10.1016/s0020-7519(00)00002-3
van Herwerden L, Gasser RB, Blair D.This study investigated sequence heterogeneity in the first internal transcribed spacer (ITS-1) of ribosomal DNA within and among species and strains of Echinococcus. Different ITS-1 sequence variants exist in Echinococcus granulosus and Echinococcus multilocularis, which represent at least four evolutionary lineages: (1) a sheep strain-lineage of E. granulosus, (2) a sister lineage of a cervid and camel E. granulosus ITS-1 variants, (3) a lineage including the ITS-1 variants representing horse, bovine and camel strains of E. granulosus, as well as variants from E. multilocularis, Echinococcus...
Production and characterisation of two monoclonal antibodies recognising equine IgG Fc receptors.
Veterinary immunology and immunopathology    March 4, 2000   Volume 73, Issue 1 63-71 doi: 10.1016/s0165-2427(99)00153-1
Aggarwal N, Holmes MA.Despite the importance of IgG Fc receptors in the regulation of various immunological mechanisms, these receptors have not been well characterised in the domesticated animals including equines. This paper describes the production of two monoclonal antibodies (CVS 59 and CVS 61) that recognise equine IgG Fc receptors. Fusions were conducted using BALB/c mice hyperimmunised with equine peripheral blood mononuclear cells. Hybridoma supernatants were screened on the basis of their ability to inhibit the rosetting of equine antibody coated sheep erythrocytes with equine peripheral blood mononuclear...
Ten equine microsatellite loci: TKY25, TKY26, TKY27, TKY28, TKY29, TKY267, TKY268, TKY269, TKY270 and TKY271.
Animal genetics    February 26, 2000   Volume 31, Issue 1 68-69 doi: 10.1111/j.1365-2052.2000.579-1.x
Kakoi H, Tozaki T, Hirota K, Mashima S, Kurosawa M, Miura N.No abstract available
Characterization of ten equine dinucleotide microsatellite loci: NVHEQ21, NVHEQ54, NVHEQ67, NVHEQ70, NVHEQ75, NVHEQ77, NVHEQ79, NVHEQ81, NVHEQ82 and NVHEQ83.
Animal genetics    February 26, 2000   Volume 31, Issue 1 78-79 doi: 10.1111/j.1365-2052.2000.579-13.x
Bjørnstad G, Midthjell L, Røed KH.No abstract available
The genetic structure of Spanish Celtic horse breeds inferred from microsatellite data.
Animal genetics    February 26, 2000   Volume 31, Issue 1 39-48 doi: 10.1046/j.1365-2052.2000.00591.x
Cañon J, Checa ML, Carleos C, Vega-Pla JL, Vallejo M, Dunner S.Partition of the genetic variability, genetic structure and relationships among seven Spanish Celtic horse breeds were studied using PCR amplification of 13 microsatellites on 481 random individuals. In addition, 60 thoroughbred horses were included. The average observed heterozygosity and the mean number of alleles were higher for the Atlantic horse breeds than for the Balearic Islands breeds. Only eight percentage of the total genetic variability could be attributed to differences among breeds (mean FST approximately 0.08; P < 0.01). Atlantic breeds clearly form a separate cluster from th...
A pedigree-based study of mitochondrial D-loop DNA sequence variation among Arabian horses.
Animal genetics    February 26, 2000   Volume 31, Issue 1 1-7 doi: 10.1046/j.1365-2052.2000.00558.x
Bowling AT, Del Valle A, Bowling M.Through DNA sequence comparisons of a mitochondrial D-loop hypervariable region, we investigated matrilineal diversity for Arabian horses in the United States. Sixty-two horses were tested. From published pedigrees they traced in the maternal line to 34 mares acquired primarily in the mid to late 19th century from nomadic Bedouin tribes. Compared with the reference sequence (GenBank X79547), these samples showed 27 haplotypes with altogether 31 base substitution sites within 397 bp of sequence. Based on examination of pedigrees from a random sampling of 200 horses in current studbooks of the A...
Comparison of the phenotypes of Streptococcus zooepidemicus isolated from tonsils of healthy horses and specimens obtained from foals and donkeys with pneumonia.
American journal of veterinary research    February 24, 2000   Volume 61, Issue 2 162-166 doi: 10.2460/ajvr.2000.61.162
Anzai T, Walker JA, Blair MB, Chambers TM, Timoney JF.To determine whether streptococcal pneumonia is caused by strains of Streptococcus zooepidemicus similar to those obtained from the tonsils of healthy horses. Methods: 5 tonsils from healthy horses, 8 tracheal washes and 6 lung specimens from foals with pneumonia, and 5 nasopharyngeal swab specimens from donkeys with acute bronchopneumonia. Methods: Variable M-like protectively immunogenic SzP proteins of 5 isolates of S. zooepidemicus from each tonsil and clinical specimen were compared, using immunoblots. The SzP gene of 13 isolates representative of various SzP immunoblot phenotypes from 1 ...
A molecular systematic framework for equine strongyles based on ribosomal DNA sequence data.
International journal for parasitology    February 17, 2000   Volume 30, Issue 1 95-103 doi: 10.1016/s0020-7519(99)00166-6
Hung GC, Chilton NB, Beveridge I, Gasser RB.In this study, molecular data sets were used to address the controversies relating to the systematics of strongyloid nematodes of equids utilising morphological data sets. DNA sequences of the first and second internal transcribed spacers (ITS-1 and ITS-2) of ribosomal DNA were determined for 30 species of equine strongyles and the systematic relationships reconstructed using phenetic and phylogenetic tree-building methods. The molecular data provided support for the hypothesis that the genera with large subglobular buccal capsules are ancestral to those with small cylindrical buccal capsules,...
SRY-negative, XX intersex horses: the need for pedigree studies to examine the mode of inheritance of the condition.
Equine veterinary journal    February 8, 2000   Volume 32, Issue 1 78-81 doi: 10.2746/042516400777612071
Buoen LC, Zhang TQ, Weber AF, Ruth GR.No abstract available
Heritability of percentage of fast myosin heavy chains in skeletal muscles and relationship with performance.
Equine veterinary journal. Supplement    February 5, 2000   Issue 30 289-292 doi: 10.1111/j.2042-3306.1999.tb05236.x
Barrey E, Valette JP, Jouglin M, Blouin C, Langlois B.The purpose of this study was to determine the percentage of fast myosin heavy chains (fast MHCs = MHC 2A + 2B) in 2 propelling muscles to estimate the heritability and to identify any relationship with performance. The gluteus medius and the biceps femoris muscles were biopsied in 100 related French Anglo-Arabian horses. The percentages of slow and fast myosin heavy chains were measured using an ELISA technique. The heritability (s.e.) of the fast MHCs percentage was estimated at 13% (0.1) using a restricted maximum likelihood resolution of a mixed animal model. There were significant (P < 0....
Zymographic analysis of equine laminitis.
Histochemistry and cell biology    January 29, 2000   Volume 112, Issue 6 467-472 doi: 10.1007/s004180050430
Mungall BA, Pollitt CC.To investigate the role of matrix metalloproteinase (MMP) activity in the pathophysiology of equine laminitis, the techniques of in situ zymography and quantitative SDS-PAGE zymography were used to analyse the lamellae and plasma and serum of horses with carbohydrate overload-induced laminitis. The gelatinase activity localised within the epidermal lamellae of laminitic hooves did not differ significantly from normal hooves. In laminitis sections there was an increase in vascular gelatinase activity, possibly associated with the perivascular cuffing of polymorphonucleocytes. Both plasma and se...
Development of a PCR test for rapid diagnosis of contagious equine metritis.
The Journal of veterinary medical science    January 29, 2000   Volume 61, Issue 12 1287-1292 doi: 10.1292/jvms.61.1287
Anzai T, Eguchi M, Sekizaki T, Kamada M, Yamamoto K, Okuda T.In order to establish a rapid diagnostic method for contagious equine metritis (CEM), we developed and evaluated a polymerase chain reaction (PCR) test. Species-specific PCR primer sets were derived from the DNA sequence of a cloned DNA fragment of Taylorella equigenitalis that did not hybridize with the genome of a taxomonically related species, Oligella urethralis. Single step PCR with primer set P1-N2 and two-step semi-nested PCR with primer sets P1-N2 and P2-N2 detected as low as 100 and 10 CFU of the bacteria, respectively. Single-step PCR detected T. equigenitalis from genital swabs of e...
Expression of CRISP proteins in the male equine genital tract.
Journal of reproduction and fertility. Supplement    January 25, 2000   Volume 53 67-72 
Schambony A, Hess O, Gentzel M, Töpfer-Petersen E.Cysteine rich secretory proteins (CRISPs) have been detected immunochemically in the equine male genital tract. CRISPs are secretory products of the epididymis, the ampulla and the seminal vesicle. A particular feature of the horse is the abundance of CRISPs in seminal plasma. CRISPs can also be detected in extracts of testicular, epididymal and ejaculated spermatozoa in increasing amounts. Unlike other seminal plasma proteins, they cannot be removed completely from spermatozoa by high salt treatment. The remaining CRISP antigens are localized on the midpiece, and the postacrosomal and equator...
Analyses of TCRB rearrangements substantiate a profound deficit in recombination signal sequence joining in SCID foals: implications for the role of DNA-dependent protein kinase in V(D)J recombination.
Journal of immunology (Baltimore, Md. : 1950)    January 21, 2000   Volume 164, Issue 3 1416-1424 doi: 10.4049/jimmunol.164.3.1416
Shin EK, Rijkers T, Pastink A, Meek K.We reported previously that the genetic SCID disease observed in Arabian foals is explained by a defect in V(D)J recombination that profoundly affects both coding and signal end joining. As in C.B-17 SCID mice, the molecular defect in SCID foals is in the catalytic subunit of the DNA-dependent protein kinase (DNA-PKCS); however, in SCID mice, signal end resolution remains relatively intact. Moreover, recent reports indicate that mice that completely lack DNA-PKCS also generate signal joints at levels that are indistinguishable from those observed in C.B-17 SCID mice, eliminating the possibilit...
Horse alpha-1-antitrypsin, beta-lactoglobulins 1 and 2, and transferrin map to positions 24q15-q16, 28q18-qter, 28q18-qter and 16q23, respectively. Lear TL, Brandon R, Masel A, Bell K, Bailey E.No abstract available
[Quantitative characteristics of the differential banding pattern prometaphase chromosomes of the domestic horse (Equus caballus)].
Genetika    January 7, 2000   Volume 35, Issue 10 1410-1421 
Deriusheva SE, Loginova IuA, Chiriaeva OG, Iaschak K.A high-resolution cytogenetic map (670 bands per haploid set) of RBA-banded chromosomes has been constructed in the domestic horse Equus caballus. The size and distribution of the replication-based R(G)-bands were analyzed using the computer program VideoTest-Karyo. The obtained data were compared to the results of cytogenetic mapping in other mammalian species and human.
Role of dendritic cell targeting in Venezuelan equine encephalitis virus pathogenesis.
Journal of virology    January 7, 2000   Volume 74, Issue 2 914-922 doi: 10.1128/jvi.74.2.914-922.2000
MacDonald GH, Johnston RE.The initial steps of Venezuelan equine encephalitis virus (VEE) spread from inoculation in the skin to the draining lymph node have been characterized. By using green fluorescent protein and immunocytochemistry, dendritic cells in the draining lymph node were determined to be the primary target of VEE infection in the first 48 h following inoculation. VEE viral replicon particles, which can undergo only one round of infection, identified Langerhans cells to be the initial set of cells infected by VEE directly following inoculation. These cells are resident dendritic cells in the skin, which mi...
Interactions between equine cyclin T1, Tat, and TAR are disrupted by a leucine-to-valine substitution found in human cyclin T1.
Journal of virology    January 7, 2000   Volume 74, Issue 2 892-898 doi: 10.1128/jvi.74.2.892-898.2000
Taube R, Fujinaga K, Irwin D, Wimmer J, Geyer M, Peterlin BM.Transcriptional transactivators (Tat) from human immunodeficiency and equine infectious anemia viruses (HIV and EIAV) interact with their transactivation response elements (TAR) to increase the rates of viral transcription. Whereas the human cyclin T1 is required for the binding of Tat to TAR from HIV, it is unknown how Tat from EIAV interacts with its TAR. Furthermore, Tat from EIAV functions in equine and canine cells but not in human cells. In this study, we present sequences of cyclins T1 from horse and dog and demonstrate that their N-terminal 300 residues rescue the transactivation of Ta...
Epidemiologic analysis of factors influencing exertional rhabdomyolysis in Thoroughbreds.
American journal of veterinary research    January 6, 2000   Volume 60, Issue 12 1562-1566 
MacLeay JM, Sorum SA, Valberg SJ, Marsh WE, Sorum MD.To determine incidence, effect on performance, and management practices associated with exertional rhabdomyolysis (ER) in Thoroughbreds. Methods: Medical records for 984 Thoroughbreds and a survey of trainers of horses with and without ER. Methods: Medical records for 984 Thoroughbreds stabled at a midwestern racetrack were examined to determine the incidence of ER during the 1995 racing season. A retrospective questionnaire was administered to trainers to determine management practices associated with ER in 59 Thoroughbreds with ER and 47 control Thoroughbreds in training. Multiple logistic r...
Microchipping horses.
The Veterinary record    January 5, 2000   Volume 145, Issue 22 647 
Ware S.No abstract available
Proceedings of the Seventh International Symposium on Equine Reproduction, July 12-17, 1998, Pretoria, South Africa.
Journal of reproduction and fertility. Supplement    January 1, 2000   Issue 56 3-734 
No abstract available
Equine reproduction VII. Summing up.
Journal of reproduction and fertility. Supplement    January 1, 2000   Issue 56 731-734 
Flood PF.No abstract available
Repeated follicle aspiration in mares: consequences for follicle growth and oocyte quality.
Journal of reproduction and fertility. Supplement    January 1, 2000   Issue 56 463-472 
Kanitz W, Alm H, Becker F, Nürnberg G, Kurth J, Hinrichs K.Cumulus-oocyte complexes (COCs) recovered from ovaries of mares killed at abattoirs or after in vivo collection have heterogeneous morphologies and meiotic competence as follicles of variable quality are used. It is thought that it should be possible to recover more uniform COCs, with respect to morphology and nuclear maturation, by repeated follicle aspiration. Therefore, the influence of repeated follicle aspiration on the number and diameter of follicles > or =5 mm in diameter, the morphology and recovery rate of COCs, and the chromatin configuration in oocytes was investigated. Repeated...
Differential gene expression in day 12 and day 15 equine conceptuses.
Journal of reproduction and fertility. Supplement    January 1, 2000   Issue 56 539-547 
Simpson KS, Adams MH, Behrendt-Adam CY, Baker CB, McDowell KJ.Complex changes in gene expression must occur at the proper time and in the appropriate tissues for pregnancy to be successful. Therefore, research aimed at defining the regulation of gene expression in conceptuses is of critical importance. However, information on developmentally regulated changes in gene expression in horse conceptuses is sparse and inadequate. In the present study, suppression subtractive hybridization was used to identify genes that are expressed more highly at day 15 than on day 12 of gestation. This period encompasses maternal recognition of pregnancy and the beginning o...
Intra- and inter-stallion variation in sperm morphology and their relationship with fertility.
Journal of reproduction and fertility. Supplement    January 1, 2000   Issue 56 93-100 
Love CC, Varner DD, Thompson JA.Dismount semen samples were collected from Thoroughbred stallions during the breeding season to determine the magnitude and significance of the variation in sperm morphology within (intra-) and among (inter-) stallions. The degree of intra-stallion variation in sperm morphology during the breeding season was substantial (coefficient of variation: 20%; range 8-56%), but did not affect the day-to-day fertility of sperm samples taken from the same stallion (intra-stallion). This variability did not affect the pregnancy rate of the mares with which each stallion was mated. The degree of interstall...
Influence of epidermal growth factor on in vitro maturation of equine oocytes.
Journal of reproduction and fertility. Supplement    January 1, 2000   Issue 56 483-492 
Goudet G, Belin F, Młodawska W, Bézard J.The effect of epidermal growth factor (EGF) on the in vitro maturation rate of equine oocytes was examined. Oocytes were collected from an abattoir (Expt 1) or using ultrasound-guided follicular puncture in vivo (Expt 2). All oocytes with a compact or expanded cumulus at recovery were cultured for 30 h in: medium 1 (TCM199 + fetal calf serum (FCS) + crude equine gonadotrophin (CEG) + oestradiol + antibiotics); medium 2 (TCM199 + EGF); medium 3 (medium 1 without FCS + EGF); or medium 4 (medium 1 without CEG + EGF). In Expt 1, 84% (37/44) and 87% (40/46) cumulus expansion (P > 0.05), and 39% (22...
Immunization with stallion lymphocytes for treatment of recurrent spontaneous abortion in thoroughbred mares.
Journal of reproduction and fertility. Supplement    January 1, 2000   Issue 56 645-650 
Mathias S, Allen WR.The incidence of recurrent spontaneous abortion within the human population in the Western world is low (2-5%) but significant, and a proportion of these pregnancy losses are thought to have an underlying immunological cause. Immunization of women who have a history of recurrent spontaneous abortion with lymphocytes isolated from their husband or a third party donor is one of several forms of immunotherapy used to treat the problem. Early pregnancy loss in Thoroughbred mares is also significant and, as in women, a small number of mares undergo repeated pregnancy losses. Two trials have been pe...
Differential expression of steroidogenic enzymes by the primary corpora lutea of pregnant mares during equine chorionic gonadotrophin secretion.
Journal of reproduction and fertility. Supplement    January 1, 2000   Issue 56 627-634 
Albrecht BA, MacLeod JN, Daels PF.At the onset of equine chorionic gonadotrophin (eCG) secretion, eCG stimulates luteal androgen and oestrogen production. Although eCG concentrations increase exponentially from day 37 to day 60 of gestation and eCG is detectable in maternal serum until about day 120-150 of gestation, luteal androgen and oestrogen production peaks between 5 and 10 days after initial exposure to eCG and then decreases gradually. It is not clear how eCG regulates luteal androgen and oestrogen production. In the present study, the steady-state mRNA expression of 3beta-hydroxysteroid dehydrogenase (3beta-HSD), cyto...
Equine trophoblast as an immunological target.
Journal of reproduction and fertility. Supplement    January 1, 2000   Issue 56 635-644 
Baker JM, Bamford AI, Carlson ML, Mcculloch CE, Antczak DF.A cytotoxic T-lymphocyte assay was used to determine whether equine chorionic girdle cells are susceptible to lysis by CD8+ cytotoxic T cells primed in vitro against allogeneic lymphocytes. Classical cytotoxic T-lymphocyte activity against fresh or cultured trophoblast targets was demonstrated using peripheral blood lymphocytes from nonpregnant mares. Lysis of allogeneic (horse) and xenogeneic (donkey) lymphocyte targets was used as a control for trophoblast lysis. The major histocompatibility complex (MHC) class I specificity of the cytotoxic T-lymphocyte reactions was determined using panels...