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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Effect of time during transport of excised mare ovaries on oocyte recovery rate and quality after in vitro maturation.
Theriogenology    March 29, 2000   Volume 52, Issue 5 757-766 doi: 10.1016/S0093-691X(99)00169-7
Guignot F, Bezard J, Palmer E.In the mare only a limited number of oocytes can be successfully collected in vivo, so that when large numbers of oocytes are needed for experimentation, ovaries harvested from slaughtered mares must be used. The resulting temperature changes and time intervals mandated by handling and transport of ovaries from the slaughterhouse to the laboratory adversely affect the rate of oocyte recovery and their quality after IVF and maturation. We chose to study the effect of temperature and time in transit of excised ovaries by evaluating rate of oocyte recovery, nuclear maturation stage reached before...
Heme orientation affects holo-myoglobin folding and unfolding kinetics.
FEBS letters    March 29, 2000   Volume 470, Issue 2 203-206 doi: 10.1016/s0014-5793(00)01319-3
Moczygemba C, Guidry J, Wittung-Stafshede P.Native myoglobin (Mb) consists of two populations which differ in the orientation of the heme by 180 degrees rotation (as verified by nuclear magnetic resonance) but have identical absorption spectra and equilibrium-thermodynamic stability. Here, we report that these two fractions of native oxidized Mb (from horse) both unfold and refold (chemical denaturant, pH 7, 20 degrees C) in two parallel kinetic reactions with rate constants differing 10-fold. In accord, the oxidized heme remains coordinated to unfolded horse Mb in up to 4 M guanidine hydrochloride (pH 7, 20 degrees C).
Effects of melatonin implants in pony mares. 1. Acute effects.
Theriogenology    March 25, 2000   Volume 49, Issue 6 1113-1123 doi: 10.1016/s0093-691x(98)00060-0
Peltier MR, Robinson G, Sharp DC.The effects of melatonin implant treatment over a four week period on LH, estradiol (E2) and progesterone (P4) secretion during the breeding season were studied in ovary-intact and ovariectomized pony mares. Mares with melatonin implants had significantly higher daytime melatonin concentrations than mares with sharm implants (P = 0.0065). In ovariectomized mares, LH secretion did not differ between mares with melatonin and sham implants. In ovary-intact mares, melatonin implants altered the pattern of LH secretion (P = 0.0023) in such a way that an increase in LH secretion was observed during ...
Effect of mare’s age and recovery methods on the recovery rate of equine follicular oocytes for IVM procedures.
Theriogenology    March 25, 2000   Volume 49, Issue 4 735-741 doi: 10.1016/S0093-691X(98)00022-3
Erice I, Gil L, Josa A, Echegaray A, Martinez F, Espinosa E.Mares (n = 39) were classified according to age as young (less than 1.5 yr, n = 17) or old (more than 1.5 yr, n = 22) and sacrificed. Ovaries were measured and weighed, and the number of follicles and CL were counted. Follicle size and distribution were recorded (external: > 20 mm, 5 mm, < 5 mm). External follicles were aspirated while internal follicles were sliced. The number and Type of oocytes recovered using each method were recorded. Oocyte recovery rates (oocytes/ovary) resulted in a mean of 0.92 oocytes by aspiration and 1.36 oocytes by additional slicing. The mean numbers of av...
Effect of insemination dose on pregnancy rate in mares.
Theriogenology    March 25, 2000   Volume 49, Issue 5 1071-1074 doi: 10.1016/s0093-691x(98)00055-7
Gahne S, Gånheim A, Malmgren L.Different insemination doses have been used for artificial insemination(AI) in horses. Since the insemination dose can affect the pregnancy rate, it is important to ensure that an adequate dose be used regardless of the type of inseminationprotocol used. The aim of this study was to find out if it is possible to decrease the insemination dose from 500 x 10(6) progressively motile spermatozoa to 300 x 10(6) progressively motile spermatozoa and still maintain an acceptable pregnancy rate when using extended fresh semen. Thirteen stallions of known fertility and a well-defined group of 64 mares w...
Epididymal maturation affects calcium regulation in equine spermatozoa exposed to heparin and glucose.
Theriogenology    March 25, 2000   Volume 49, Issue 3 683-695 doi: 10.1016/s0093-691x(98)00018-1
Merkies K, Buhr MM.Spermatozoal function is affected by the ability to regulate intracellular calcium concentrations ([Ca2+]i), and may be influenced by epididymal maturation as well as environmental components. Regulation of [Ca2+]i in ejaculated and epididymal stallion spermatozoa was monitored over time in various media. Spermatozoa from each of 5 pony stallions (3 ejaculate samples and 1 caput and cauda sample) were labeled with the fluorescent calcium indicator probe Indo-1 in a calcium-free modified Tyrode's buffer. Fluorescent emissions were monitored by a dual wavelength spectrofluorometer over 5 h. Calc...
Temporal interrelationships among luteolysis, FSH and LH concentrations and follicle deviation in mares.
Theriogenology    March 24, 2000   Volume 53, Issue 4 925-940 doi: 10.1016/S0093-691X(00)00240-5
Gastal EL, Gastal MO, Nogueira GP, Bergfelt DR, Ginther OJ.The effect of altered LH concentrations on the deviation in growth rates between the 2 largest follicles was studied in pony mares. The progestational phase was shortened by administration of PGF2alpha on Day 10 (Day 0=ovulation; n=9) or lengthened by daily administration of 100 mg of progesterone on Days 10 to 30 (n=11; controls, n=10). All follicles > or = 5 mm were ablated on Day 10 in all groups to initiate a new follicular wave. The interovulatory interval was not altered by the PGF2alpha treatment despite a 4-day earlier decrease in progesterone concentrations. Time required for growt...
Synteny and regional marker order assignment of 26 type I and microsatellite markers to the horse X- and Y-chromosomes. Shiue Y-L , Millon LV, Skow LC, Honeycutt D, Murray JD, Bowling AT.The hypothesis that the conservation of sex-chromosome-linked genes among placental mammals could be extended to the horse genome was tested using the UCDavis horse-mouse somatic cell hybrid (SCH) panel. By exploiting the fluorescence in-situ hybridization (FISH) technique to localize an anchor locus, X-inactivation-specific transcript (XIST) on the horse X chromosome, together with the fragmentation and translocation of the X- and Y-chromosome fragments in a somatic cell hybrid panel, we regionally assigned 13 type I and 13 type II (microsatellite) markers to the horse X- and Y-chromosomes. T...
Birth of a foal after oocyte transfer to a nonovulating, hormone-treated recipient mare.
Theriogenology    March 23, 2000   Volume 51, Issue 7 1251-1258 doi: 10.1016/S0093-691X(99)00069-2
Hinrichs K, Provost PJ, Torello EM.A nonovulating, hormone-treated mare was used successfully as an oocyte recipient. The mare's ovarian activity was suppressed using progesterone and estrogen treatment. This treatment was stopped, then estrogen was administered for 3 d prior to the transfer. An oocyte was recovered from the follicle of a donor mare and was transferred via flank laparotomy into the recipient's oviduct. The recipient mare was inseminated 7 h before transfer. The recipient was treated with intramuscular progesterone from the day after transfer until 47 d after transfer, and then with oral altrenogest until 150 d ...
Isolation and characterization of a cDNA encoding a horse liver butyrylcholinesterase: evidence for CPT-11 drug activation.
Biochemical pharmacology    March 16, 2000   Volume 59, Issue 7 773-781 doi: 10.1016/s0006-2952(99)00389-5
Wierdl M, Morton CL, Danks MK, Potter PM.Butyrylcholinesterases (BuChEs; acylcholine acylhydrolase; EC 3.1.1.8) have been demonstrated to convert the anticancer agent CPT-11 (irinotecan, 7-ethyl-10-[4-(1-piperidino)-1-piperidino]carbonyloxycamptothecin) into its active metabolite SN-38 (7-ethyl-10-hydroxycamptothecin). In addition, significant differences in the extent of drug metabolism have been observed with BuChEs derived from different species. In an attempt to understand these differences, we have isolated the cDNA encoding a horse BuChE. Based upon the NH2-terminal amino acid sequence of a purified horse BuChE, we designed deg...
Binding of equine infectious anemia virus matrix protein to membrane bilayers involves multiple interactions.
Journal of molecular biology    March 15, 2000   Volume 296, Issue 3 887-898 doi: 10.1006/jmbi.1999.3482
Provitera P, Bouamr F, Murray D, Carter C, Scarlata S.Human immunodeficiency virus (HIV) and equine infectious anemia virus (EIAV) are closely related lentiviruses that infect immune cells, but their pathogenesis differ. Localization to the cytosolic leaflet of the plasma membrane is critical for replication of both viruses. This localization is accomplished through the matrix (MA) domain of the Gag precursor protein. In HIV-1, association of MA to anionic membranes appears to be primarily driven by a linear cluster of basic residues in the MA domain and an N-myristoylation signal. Interestingly, the MA protein of EIAV does not contain either of ...
Molecular cloning and sequencing of the low-affinity IgE receptor (CD23) for horse and cattle.
Veterinary immunology and immunopathology    March 14, 2000   Volume 73, Issue 3-4 323-329 doi: 10.1016/s0165-2427(00)00151-3
Watson JL, Jackson KA, King DP, Stott JL.Expression of the low-affinity IgE receptor (CD23) on the surface of mononuclear cells is a critical event in the development of IgE-mediated immunologic responses. Using PCR and cDNA library screening, a 2.7kb cDNA encoding equine CD23 and a 627bp PCR fragment of cattle CD23 were sequenced and characterized. The equine CD23 sequence encodes a complete and continuous open reading frame of 327 amino acids, while the shorter cattle fragment encodes 209 amino acids corresponding to nucleotides 325-1098 of the equine CD23 transcript. In addition to high identities in their nucleotides and translat...
Polysaccharide storage myopathy in Morgan, Arabian, and Standardbred related horses and Welsh-cross ponies.
Veterinary pathology    March 14, 2000   Volume 37, Issue 2 193-196 doi: 10.1354/vp.37-2-193
Valentine BA, McDonough SP, Chang YF, Vonderchek AJ.Polysaccharide storage myopathy is an equine neuromuscular disorder characterized by accumulation of glycogen-related polysaccharide inclusions within skeletal muscle fibers. The pathologic criteria for diagnosis of this disorder are somewhat controversial; however, periodic acid-Schiff-positive, amylase-resistant inclusions are considered pathognomonic. Although these inclusions are most often found in affected horses related to the Quarter Horse, draft horse, and Warmblood breeds, this report describes these characteristic inclusions in muscle of five horses from nonrelated breeds (two Morga...
Isolation and characterization of an arterivirus defective interfering RNA genome.
Journal of virology    March 9, 2000   Volume 74, Issue 7 3156-3165 doi: 10.1128/jvi.74.7.3156-3165.2000
Molenkamp R, Rozier BC, Greve S, Spaan WJ, Snijder EJ.Equine arteritis virus (EAV), the type member of the family Arteriviridae, is a single-stranded RNA virus with a positive-stranded genome of approximately 13 kb. EAV uses a discontinuous transcription mechanism to produce a nested set of six subgenomic mRNAs from which its structural genes are expressed. We have generated the first documented arterivirus defective interfering (DI) RNAs by serial undiluted passaging of a wild-type EAV stock in BHK-21 cells. A cDNA copy of the smallest DI RNA (5.6 kb) was cloned. Upon transfection into EAV-infected BHK-21 cells, transcripts derived from this clo...
ITS-1 ribosomal DNA sequence variants are maintained in different species and strains of Echinococcus.
International journal for parasitology    March 8, 2000   Volume 30, Issue 2 157-169 doi: 10.1016/s0020-7519(00)00002-3
van Herwerden L, Gasser RB, Blair D.This study investigated sequence heterogeneity in the first internal transcribed spacer (ITS-1) of ribosomal DNA within and among species and strains of Echinococcus. Different ITS-1 sequence variants exist in Echinococcus granulosus and Echinococcus multilocularis, which represent at least four evolutionary lineages: (1) a sheep strain-lineage of E. granulosus, (2) a sister lineage of a cervid and camel E. granulosus ITS-1 variants, (3) a lineage including the ITS-1 variants representing horse, bovine and camel strains of E. granulosus, as well as variants from E. multilocularis, Echinococcus...
Production and characterisation of two monoclonal antibodies recognising equine IgG Fc receptors.
Veterinary immunology and immunopathology    March 4, 2000   Volume 73, Issue 1 63-71 doi: 10.1016/s0165-2427(99)00153-1
Aggarwal N, Holmes MA.Despite the importance of IgG Fc receptors in the regulation of various immunological mechanisms, these receptors have not been well characterised in the domesticated animals including equines. This paper describes the production of two monoclonal antibodies (CVS 59 and CVS 61) that recognise equine IgG Fc receptors. Fusions were conducted using BALB/c mice hyperimmunised with equine peripheral blood mononuclear cells. Hybridoma supernatants were screened on the basis of their ability to inhibit the rosetting of equine antibody coated sheep erythrocytes with equine peripheral blood mononuclear...
Ten equine microsatellite loci: TKY25, TKY26, TKY27, TKY28, TKY29, TKY267, TKY268, TKY269, TKY270 and TKY271.
Animal genetics    February 26, 2000   Volume 31, Issue 1 68-69 doi: 10.1111/j.1365-2052.2000.579-1.x
Kakoi H, Tozaki T, Hirota K, Mashima S, Kurosawa M, Miura N.No abstract available
Characterization of ten equine dinucleotide microsatellite loci: NVHEQ21, NVHEQ54, NVHEQ67, NVHEQ70, NVHEQ75, NVHEQ77, NVHEQ79, NVHEQ81, NVHEQ82 and NVHEQ83.
Animal genetics    February 26, 2000   Volume 31, Issue 1 78-79 doi: 10.1111/j.1365-2052.2000.579-13.x
Bjørnstad G, Midthjell L, Røed KH.No abstract available
The genetic structure of Spanish Celtic horse breeds inferred from microsatellite data.
Animal genetics    February 26, 2000   Volume 31, Issue 1 39-48 doi: 10.1046/j.1365-2052.2000.00591.x
Cañon J, Checa ML, Carleos C, Vega-Pla JL, Vallejo M, Dunner S.Partition of the genetic variability, genetic structure and relationships among seven Spanish Celtic horse breeds were studied using PCR amplification of 13 microsatellites on 481 random individuals. In addition, 60 thoroughbred horses were included. The average observed heterozygosity and the mean number of alleles were higher for the Atlantic horse breeds than for the Balearic Islands breeds. Only eight percentage of the total genetic variability could be attributed to differences among breeds (mean FST approximately 0.08; P < 0.01). Atlantic breeds clearly form a separate cluster from th...
A pedigree-based study of mitochondrial D-loop DNA sequence variation among Arabian horses.
Animal genetics    February 26, 2000   Volume 31, Issue 1 1-7 doi: 10.1046/j.1365-2052.2000.00558.x
Bowling AT, Del Valle A, Bowling M.Through DNA sequence comparisons of a mitochondrial D-loop hypervariable region, we investigated matrilineal diversity for Arabian horses in the United States. Sixty-two horses were tested. From published pedigrees they traced in the maternal line to 34 mares acquired primarily in the mid to late 19th century from nomadic Bedouin tribes. Compared with the reference sequence (GenBank X79547), these samples showed 27 haplotypes with altogether 31 base substitution sites within 397 bp of sequence. Based on examination of pedigrees from a random sampling of 200 horses in current studbooks of the A...
Comparison of the phenotypes of Streptococcus zooepidemicus isolated from tonsils of healthy horses and specimens obtained from foals and donkeys with pneumonia.
American journal of veterinary research    February 24, 2000   Volume 61, Issue 2 162-166 doi: 10.2460/ajvr.2000.61.162
Anzai T, Walker JA, Blair MB, Chambers TM, Timoney JF.To determine whether streptococcal pneumonia is caused by strains of Streptococcus zooepidemicus similar to those obtained from the tonsils of healthy horses. Methods: 5 tonsils from healthy horses, 8 tracheal washes and 6 lung specimens from foals with pneumonia, and 5 nasopharyngeal swab specimens from donkeys with acute bronchopneumonia. Methods: Variable M-like protectively immunogenic SzP proteins of 5 isolates of S. zooepidemicus from each tonsil and clinical specimen were compared, using immunoblots. The SzP gene of 13 isolates representative of various SzP immunoblot phenotypes from 1 ...
A molecular systematic framework for equine strongyles based on ribosomal DNA sequence data.
International journal for parasitology    February 17, 2000   Volume 30, Issue 1 95-103 doi: 10.1016/s0020-7519(99)00166-6
Hung GC, Chilton NB, Beveridge I, Gasser RB.In this study, molecular data sets were used to address the controversies relating to the systematics of strongyloid nematodes of equids utilising morphological data sets. DNA sequences of the first and second internal transcribed spacers (ITS-1 and ITS-2) of ribosomal DNA were determined for 30 species of equine strongyles and the systematic relationships reconstructed using phenetic and phylogenetic tree-building methods. The molecular data provided support for the hypothesis that the genera with large subglobular buccal capsules are ancestral to those with small cylindrical buccal capsules,...
SRY-negative, XX intersex horses: the need for pedigree studies to examine the mode of inheritance of the condition.
Equine veterinary journal    February 8, 2000   Volume 32, Issue 1 78-81 doi: 10.2746/042516400777612071
Buoen LC, Zhang TQ, Weber AF, Ruth GR.No abstract available
Heritability of percentage of fast myosin heavy chains in skeletal muscles and relationship with performance.
Equine veterinary journal. Supplement    February 5, 2000   Issue 30 289-292 doi: 10.1111/j.2042-3306.1999.tb05236.x
Barrey E, Valette JP, Jouglin M, Blouin C, Langlois B.The purpose of this study was to determine the percentage of fast myosin heavy chains (fast MHCs = MHC 2A + 2B) in 2 propelling muscles to estimate the heritability and to identify any relationship with performance. The gluteus medius and the biceps femoris muscles were biopsied in 100 related French Anglo-Arabian horses. The percentages of slow and fast myosin heavy chains were measured using an ELISA technique. The heritability (s.e.) of the fast MHCs percentage was estimated at 13% (0.1) using a restricted maximum likelihood resolution of a mixed animal model. There were significant (P < 0....
Zymographic analysis of equine laminitis.
Histochemistry and cell biology    January 29, 2000   Volume 112, Issue 6 467-472 doi: 10.1007/s004180050430
Mungall BA, Pollitt CC.To investigate the role of matrix metalloproteinase (MMP) activity in the pathophysiology of equine laminitis, the techniques of in situ zymography and quantitative SDS-PAGE zymography were used to analyse the lamellae and plasma and serum of horses with carbohydrate overload-induced laminitis. The gelatinase activity localised within the epidermal lamellae of laminitic hooves did not differ significantly from normal hooves. In laminitis sections there was an increase in vascular gelatinase activity, possibly associated with the perivascular cuffing of polymorphonucleocytes. Both plasma and se...
Development of a PCR test for rapid diagnosis of contagious equine metritis.
The Journal of veterinary medical science    January 29, 2000   Volume 61, Issue 12 1287-1292 doi: 10.1292/jvms.61.1287
Anzai T, Eguchi M, Sekizaki T, Kamada M, Yamamoto K, Okuda T.In order to establish a rapid diagnostic method for contagious equine metritis (CEM), we developed and evaluated a polymerase chain reaction (PCR) test. Species-specific PCR primer sets were derived from the DNA sequence of a cloned DNA fragment of Taylorella equigenitalis that did not hybridize with the genome of a taxomonically related species, Oligella urethralis. Single step PCR with primer set P1-N2 and two-step semi-nested PCR with primer sets P1-N2 and P2-N2 detected as low as 100 and 10 CFU of the bacteria, respectively. Single-step PCR detected T. equigenitalis from genital swabs of e...
Expression of CRISP proteins in the male equine genital tract.
Journal of reproduction and fertility. Supplement    January 25, 2000   Volume 53 67-72 
Schambony A, Hess O, Gentzel M, Töpfer-Petersen E.Cysteine rich secretory proteins (CRISPs) have been detected immunochemically in the equine male genital tract. CRISPs are secretory products of the epididymis, the ampulla and the seminal vesicle. A particular feature of the horse is the abundance of CRISPs in seminal plasma. CRISPs can also be detected in extracts of testicular, epididymal and ejaculated spermatozoa in increasing amounts. Unlike other seminal plasma proteins, they cannot be removed completely from spermatozoa by high salt treatment. The remaining CRISP antigens are localized on the midpiece, and the postacrosomal and equator...
Analyses of TCRB rearrangements substantiate a profound deficit in recombination signal sequence joining in SCID foals: implications for the role of DNA-dependent protein kinase in V(D)J recombination.
Journal of immunology (Baltimore, Md. : 1950)    January 21, 2000   Volume 164, Issue 3 1416-1424 doi: 10.4049/jimmunol.164.3.1416
Shin EK, Rijkers T, Pastink A, Meek K.We reported previously that the genetic SCID disease observed in Arabian foals is explained by a defect in V(D)J recombination that profoundly affects both coding and signal end joining. As in C.B-17 SCID mice, the molecular defect in SCID foals is in the catalytic subunit of the DNA-dependent protein kinase (DNA-PKCS); however, in SCID mice, signal end resolution remains relatively intact. Moreover, recent reports indicate that mice that completely lack DNA-PKCS also generate signal joints at levels that are indistinguishable from those observed in C.B-17 SCID mice, eliminating the possibilit...
Horse alpha-1-antitrypsin, beta-lactoglobulins 1 and 2, and transferrin map to positions 24q15-q16, 28q18-qter, 28q18-qter and 16q23, respectively. Lear TL, Brandon R, Masel A, Bell K, Bailey E.No abstract available
[Quantitative characteristics of the differential banding pattern prometaphase chromosomes of the domestic horse (Equus caballus)].
Genetika    January 7, 2000   Volume 35, Issue 10 1410-1421 
Deriusheva SE, Loginova IuA, Chiriaeva OG, Iaschak K.A high-resolution cytogenetic map (670 bands per haploid set) of RBA-banded chromosomes has been constructed in the domestic horse Equus caballus. The size and distribution of the replication-based R(G)-bands were analyzed using the computer program VideoTest-Karyo. The obtained data were compared to the results of cytogenetic mapping in other mammalian species and human.