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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Genetic stability of equine arteritis virus during horizontal and vertical transmission in an outbreak of equine viral arteritis.
The Journal of general virology    August 31, 1999   Volume 80 ( Pt 8) 1949-1958 doi: 10.1099/0022-1317-80-8-1949
Balasuriya UBR, Hedges JF, Nadler SA, McCollum WH, Timoney PJ, MacLachlan NJ.An imported carrier stallion (A) from Europe was implicated in causing an extensive outbreak of equine viral arteritis (EVA) on a Warmblood breeding farm in Pennsylvania, USA. Strains of equine arteritis virus (EAV) present in the semen of two carrier stallions (A and G) on the farm were compared to those in tissues of foals born during the outbreak, as well as viruses present in the semen of two other stallions that became persistently infected carriers of EAV following infection during the outbreak. The 2822 bp segment encompassing ORFs 2-7 (nt 9807-12628; which encode the G(S), GP3, GP4, G(...
Genetic evidence for the origins of Venezuelan equine encephalitis virus subtype IAB outbreaks.
The American journal of tropical medicine and hygiene    August 31, 1999   Volume 60, Issue 3 441-448 doi: 10.4269/ajtmh.1999.60.441
Weaver SC, Pfeffer M, Marriott K, Kang W, Kinney RM.Epizootics of Venezuelan equine encephalitis (VEE) involving subtype IAB viruses occurred sporadically in South, Central and North America from 1938 to 1973. Incompletely inactivated vaccines have long been suspected as a source of the later epizootics. We tested this hypothesis by sequencing the PE2 glycoprotein precursor (1,677 nucleotides) or 26S/nonstructural protein 4 (nsP4) genome regions (4,490 nucleotides) for isolates representing most major outbreaks. Two distinct IAB genotypes were identified: 1) 1940s Peruvian strains and 2) 1938-1973 isolates from South, Central, and North America...
Latency-associated transcripts of equine herpesvirus type 4 in trigeminal ganglia of naturally infected horses.
The Journal of general virology    August 31, 1999   Volume 80 ( Pt 8) 2165-2171 doi: 10.1099/0022-1317-80-8-2165
Borchers K, Wolfinger U, Ludwig H.Equine herpesvirus type 4 (EHV-4) is a major respiratory pathogen of horses. Unlike most other members of the Alphaherpesvirinae, EHV-4 was regarded as non-neurotropic. Here, neural and lymphoid tissues of 17 horses have been analysed post-mortem. EHV-4 DNA was detected in 11 cases (65%) by PCR, exclusively in the trigeminal ganglia. In order to define the transcriptional activity, RNA preparations of 10 EHV-4 DNA-positive ganglia were investigated by nested RT-PCR. EHV-4-specific transcripts derived from genes 63 [herpes simplex virus type 1 (HSV-1) ICPO gene homologue] and 64 (HSV-1 ICP4 gen...
Dual regulation of promoter II- and promoter 1f-derived cytochrome P450 aromatase transcripts in equine granulosa cells during human chorionic gonadotropin-induced ovulation: a novel model for the study of aromatase promoter switching.
Endocrinology    August 28, 1999   Volume 140, Issue 9 4133-4141 doi: 10.1210/endo.140.9.6951
Boerboom D, Kerban A, Sirois J.Estradiol biosynthesis is a key biochemical trait of developing follicles. To study its regulation in equine follicles, the objectives of this study were to clone and determine the structure of equine cytochrome P450 aromatase (P450AROM), and characterize the regulation of P450AROM and P450 17alpha-hydroxylase/C17-20 lyase (P45017alpha) messenger RNAs (mRNAs) in vivo in equine preovulatory follicles isolated during hCG-induced ovulation. Two distinct P450AROM complementary DNAs (cDNAs) were isolated from an equine preovulatory follicle cDNA library. One clone was 2682 bp in length and included...
Deletion of the Sry region on the Y chromosome detected in a case of equine gonadal hypoplasia (XY female) with abnormal hormonal profiles.
Equine veterinary journal    August 24, 1999   Volume 31, Issue 4 336-338 
Abe S, Miyake YI, Kageyama SI, Watanabe G, Taya K, Kawakura K.No abstract available
Unilateral Leydig cell tumour resulting in acute colic and scrotal swelling in a stallion with descended testes.
Equine veterinary journal    August 24, 1999   Volume 31, Issue 4 343-345 doi: 10.1111/j.2042-3306.1999.tb03828.x
May KA, Moll HD, Duncan RB, Pleasant RS, Purswell BJ.No abstract available
Testicular neoplasia of horses: an underreported condition.
Equine veterinary journal    August 24, 1999   Volume 31, Issue 4 270-272 doi: 10.1111/j.2042-3306.1999.tb03815.x
Schumacher J.No abstract available
Infertility in two mares with XY and XXX sex chromosomes.
Equine veterinary journal    August 24, 1999   Volume 31, Issue 4 346-349 doi: 10.1111/j.2042-3306.1999.tb03829.x
Mäkinen A, Hasegawa T, Mäkilä M, Katila T.No abstract available
Estimation of the prevalence of severe combined immunodeficiency disease in UK Arab horses as determined by a DNA-based test.
The Veterinary record    August 19, 1999   Volume 145, Issue 1 22-23 doi: 10.1136/vr.145.1.22
Swinburne J, Lockhart L, Scott M, Binns MM.No abstract available
Abnormal regulation of muscle contraction in horses with recurrent exertional rhabdomyolysis.
American journal of veterinary research    August 18, 1999   Volume 60, Issue 8 992-999 
Lentz LR, Valberg SJ, Balog EM, Mickelson JR, Gallant EM.To determine whether abnormal regulation of muscle contraction similar to that associated with malignant hyperthermia (MH) was evident in intact external intercostal muscle cells from Thoroughbreds with recurrent exertional rhabdomyolysis (RER). Methods: 5 adult Thoroughbred horses with RER and 7 clinically normal adult Thoroughbred or mixed-breed horses. Methods: Twitch time course variables and contracture responses to various concentrations of potassium, caffeine, and halothane were measured in small bundles of intact external intercostal muscle cells from clinically normal horses and horse...
Equine dinucleotide repeat loci COR021-COR040.
Animal genetics    August 12, 1999   Volume 30, Issue 3 235-237 doi: 10.1046/j.1365-2052.1999.00404-16.x
Murphie AM, Hopman TJ, Schug MD, Aquadro CF, Bowling AT, Murray JD, Caetano AR, Antczak DF.No abstract available
Physical mapping of ten equine dinucleotide repeat microsatellites.
Animal genetics    August 12, 1999   Volume 30, Issue 3 235 doi: 10.1046/j.1365-2052.1999.00404-15.x
Lear TL, Brandon R, Bell K.No abstract available
Distribution of the ERE-1 family in Perissodactyla.
Mammalian genome : official journal of the International Mammalian Genome Society    August 12, 1999   Volume 10, Issue 9 930-933 doi: 10.1007/s003359901117
Sakagami M, Hiromura K, Chemnick LG, Ryder OA.No abstract available
Equine dinucleotide repeat loci COR001-COR020.
Animal genetics    August 12, 1999   Volume 30, Issue 3 225-226 doi: 10.1046/j.1365-2052.1999.00404.x
Hopman TJ, Han EB, Story MR, Schug MD, Aquadro CF, Bowling AT, Murray JD, Caetano AR, Antczak DF.No abstract available
Equine herpesvirus 1 gene 12 can substitute for vmw65 in the growth of herpes simplex virus (HSV) type 1, allowing the generation of optimized cell lines for the propagation of HSV vectors with multiple immediate-early gene defects.
Journal of virology    August 10, 1999   Volume 73, Issue 9 7399-7409 doi: 10.1128/JVI.73.9.7399-7409.1999
Thomas SK, Lilley CE, Latchman DS, Coffin RS.Herpes simplex virus (HSV) has often been suggested for development as a vector, particularly for the nervous system. Considerable evidence has shown that for use of HSV as a vector, immediate-early (IE) gene expression must be minimized or abolished, otherwise such vectors are likely to be highly cytotoxic. Mutations of vmw65 which abolish IE promoter transactivating activity may also be included to reduce IE gene expression generally. However, when vmw65 mutations are combined with an IE gene deletion, such viruses are hard to propagate, even on cells which otherwise complement the IE gene d...
Nortestosterone: endogenous in urine of goats, sheep and mares?
The Analyst    August 6, 1999   Volume 123, Issue 12 2633-2636 doi: 10.1039/a804947e
Sterk S, Herbold H, Blokland M, van Rossum H, van Ginkel L, Stephany R.For a number of species it is known that nortestosterone, either the alpha- or beta-epimer, can be of endogenous origin. For goats and mares similar results have not yet been published. As a follow-up on the experiments with cattle, a large number of urine samples per animal were collected from pregnant goats, sheep and mares. These samples were analysed for the presence of alpha- and beta-nortestosterone and alpha-estradiol using GC-MS. The results show that in the goats and mares studied alpha-nortestosterone is present during pregnancy. In this study no alpha-nortestosterone could be demons...
Investigations on the stereoselective action of isoxsuprine on alpha- and beta-adrenoceptors in equine common digital artery.
Pharmacological research    August 6, 1999   Volume 40, Issue 2 177-182 doi: 10.1006/phrs.1999.0487
Belloli C, Badino P, Carcano R, Odore R, Arioli F, Caloni F, Re G.The affinity and functional effects of isoxsuprine enantiomers were investigated to determine the enantiospecificity of the beta-agonistic and alpha-blocking effects. Functional assays on isolated smooth muscle preparations from equine common digital artery were performed to determine the apparent affinity (pD(2)) and intrinsic activity (alpha(E)) of (-)erythro-isoxsuprine (alphaS, betaR, gammaR) and (+)erythro-isoxsuprine (alphaR, betaS, gammaS). The affinity of two enantiomers for the different adrenoceptor types was studied by radioligand binding assays on membrane preparations from the sam...
Molecular detection of Babesia equi and Babesia caballi in horse blood by PCR amplification of part of the 16S rRNA gene.
Veterinary parasitology    August 6, 1999   Volume 84, Issue 1-2 75-83 doi: 10.1016/s0304-4017(99)00049-7
Bashiruddin JB, Cammà C, Rebêlo E.Babesia equi and Babesia caballi are tick-borne haemoparasites that may cause babesiosis of Equidae. In southern Europe B. equi is enzootic and infections may occur asymptomatically and more frequently than those due to B. caballi. Complement fixation test (CFT) is the official serological test for the diagnosis of equine babesiosis, but it has low sensitivity during early and latent stages of the disease. With the aim of developing more sensitive and rapid direct diagnostic alternatives, PCR systems that amplified DNA targets of 664 or 659 bp regions of the 16S rRNA genes were designed and de...
Ultrastructural aspects of feeding and secretion-excretion by the equine parasite Strongylus vulgaris.
Journal of helminthology    August 4, 1999   Volume 73, Issue 2 147-155 
Mobarak MS, Ryan MF.Light, scanning, and transmission electron microscopy were employed to provide further data on the putative origins of the immunogenic secretory-excretory product (ESP) of Strongylus vulgaris (Looss 1900). The sharply delineated but superficial attachment to the equine caecum by the mouth leaves behind an oval area devoid of epithelial cells. Attachment does not extend deeply enough to reach the muscularis mucosa layer of the equine intestine. The progressive digestion of the ingested plug of tissue (epithelial cells, blood cells and mucous) was visualized. The coelomocytes, floating cells and...
Major histocompatibility complex variation in the endangered Przewalski’s horse.
Genetics    August 3, 1999   Volume 152, Issue 4 1701-1710 doi: 10.1093/genetics/152.4.1701
Hedrick PW, Parker KM, Miller EL, Miller PS.The major histocompatibility complex (MHC) is a fundamental part of the vertebrate immune system, and the high variability in many MHC genes is thought to play an essential role in recognition of parasites. The Przewalski's horse is extinct in the wild and all the living individuals descend from 13 founders, most of whom were captured around the turn of the century. One of the primary genetic concerns in endangered species is whether they have ample adaptive variation to respond to novel selective factors. In examining 14 Przewalski's horses that are broadly representative of the living animal...
Identification of Ruminococcus flavefaciens as the predominant cellulolytic bacterial species of the equine cecum.
Applied and environmental microbiology    July 31, 1999   Volume 65, Issue 8 3738-3741 doi: 10.1128/AEM.65.8.3738-3741.1999
Julliand V, de Vaux A, Millet L, Fonty G.Detection and quantification of cellulolytic bacteria with oligonucleotide probes showed that Ruminococcus flavefaciens was the predominant species in the pony and donkey cecum. Fibrobacter succinogenes and Ruminococcus albus were present at low levels. Four isolates, morphologically resembling R. flavefaciens, differed from ruminal strains by their carbohydrate utilization and their end products of cellobiose fermentation.
[HPLC separation and characterization of tick-borne encephalitis and equine Venezuela encephalomyelitis viral proteins].
Bioorganicheskaia khimiia    July 28, 1999   Volume 25, Issue 4 253-256 
Akimenko ZA, Ofitserov VI, Shaprov VV, Iastrebov SI.Homogeneous (according to PAGE) capsid and surface viral proteins were isolated from concentrated purified suspensions of tick-borne encephalitis and Venezuelan equine encephalomyelitis viruses by one-stage reversed-phase HPLC. The amino acid composition and the sequences of their N-terminal parts were determined.
[Associations between the coat color and the blood-group system D antigens in horses].
Genetika    July 27, 1999   Volume 35, Issue 4 499-503 
Kniazev SP, Nikitin SV.The study of the association between the coat-color variants and the blood-group system D antigens in the populations of two related trotter breeds (Orlov Trotter and Russian Trotter) showed the presence of three associations between these characters in the Orlov Trotter breed. In the populations of Russian trotters, these associations were not detected. Possible reasons for the formation and maintenance of these associations and the role of the selection for coat color in the differentiation of breeds by the frequencies of some system D antigens are discussed.
A PCR based method for the identification of equine influenza virus from clinical samples.
Veterinary microbiology    July 27, 1999   Volume 67, Issue 3 161-174 doi: 10.1016/s0378-1135(99)00041-3
Oxburgh L, Hagström A.In this paper we describe the development of a nested RT-PCR assay for the rapid diagnosis and characterisation of influenza virus directly from clinical specimens. Viral RNA is extracted from nasal swabs by the guanidine thiocyanate extraction method, and subsequently reverse transcribed. The complementary DNA is then used as template in a nested PCR reaction. Primers designed for use in this assay are specific for three templates; (1) the nucleoprotein (NP) gene, (2) the haemagglutinin gene of the H7N7 equine influenza virus (A1), and (3) the haemagglutinin gene of the H3N8 equine influenza ...
A plasma membrane-associated hyaluronidase is localized to the posterior acrosomal region of stallion sperm and is associated with spermatozoal function.
Biology of reproduction    July 20, 1999   Volume 61, Issue 2 444-451 doi: 10.1095/biolreprod61.2.444
Meyers SA, Rosenberger AE.Sperm hyaluronidase has been implicated in sperm penetration of the extracellular matrix of the cumulus oophorus and may play a crucial role in gamete interaction and fertility in mammals. The objectives of this study were to characterize the enzyme activity of equine sperm hyaluronidase and to investigate its cellular distribution. Zymography of stallion sperm plasma membrane extracts was used to identify hyaluronidase activity in protein bands. Affinity-purified polyclonal IgG raised against equine sperm hyaluronidase was used to label fresh and capacitated stallion sperm, followed by indire...
Effects of fetuin on zona pellucida hardening and fertilizability of equine oocytes matured in vitro.
Biology of reproduction    July 20, 1999   Volume 61, Issue 2 533-540 doi: 10.1095/biolreprod61.2.533
Dell'Aquila ME, De Felici M, Massari S, Maritato F, Minoia P.In vitro fertilization (IVF) has had poor success in the horse, a situation related to low rates of sperm penetration through the zona pellucida (ZP). Zona pellucida hardening (ZPH) is seen in mouse and rat oocytes cultured in serum-free medium. The hardened ZP is refractory to sperm penetration. Fetuin, a component of fetal calf serum, inhibits ZPH and allows normal fertilization rates in oocytes cultured in the absence of serum. We evaluated whether fetuin is present in horse serum and follicular fluid (FF) and whether fetuin could inhibit ZPH in equine oocytes matured in vitro, thus increas...
Equine arteritis virus derived from an infectious cDNA clone is attenuated and genetically stable in infected stallions.
Virology    July 16, 1999   Volume 260, Issue 1 201-208 doi: 10.1006/viro.1999.9817
Balasuriya UB, Snijder EJ, van Dinten LC, Heidner HW, Wilson WD, Hedges JF, Hullinger PJ, MacLachlan NJ.Virus derived from an infectious cDNA clone of equine arteritis virus (EAV030H) was intranasally inoculated into two stallions, neither of which subsequently developed clinical manifestations of equine viral arteritis (EVA). Virus was isolated from nasal swabs and mononuclear cells collected from both stallions
Expression of endothelin in equine laminitis.
Equine veterinary journal    July 13, 1999   Volume 31, Issue 3 243-247 doi: 10.1111/j.2042-3306.1999.tb03180.x
Katwa LC, Johnson PJ, Ganjam VK, Kreeger JM, Messer NT.Biosynthesis of endothelin-1 (ET-1), the most potent endogenous vasoconstrictor yet identified, is increased following myocardial infarction (MI) in man. Pathological events which occur in the connective tissues of the equine hoof during laminitis are similar in some respects, to changes occurring in the myocardial connective tissues following MI in man. The objective of this study was to determine whether ET-1 expression in connective tissues obtained from the hoof of laminitic horses is increased compared with tissues obtained from healthy horses. Expression of ET-1 in connective tissues of ...
Phylogenetic relationships of Cheju horses to other horse breeds as determined by mtDNA D-loop sequence polymorphism.
Animal genetics    June 22, 1999   Volume 30, Issue 2 102-108 doi: 10.1046/j.1365-2052.1999.00419.x
Kim KI, Yang YH, Lee SS, Park C, Ma R, Bouzat JL, Lewin HA.Historical records suggest that horses inhabiting the island of Cheju in Korea are descendants of Mongolian horses introduced in 1276. Other studies, however, suggest that horses may have been present on the island prior to the Mongolian introduction. To determine the origin of the Cheju horses we used a phylogenetic analysis of sequences of the mitochondrial DNA (mtDNA) D-loop region, including tRNA Pro and parts of tRNA thr and tRNA Phe sequences (1102-bp excluding the tandem repeat region). Maximum parsimony and neighbor-joining trees were constructed using sequences determined for seven Ch...
Phylogenetic characterization of a highly attenuated strain of equine arteritis virus from the semen of a persistently infected standardbred stallion.
Archives of virology    June 12, 1999   Volume 144, Issue 4 817-827 doi: 10.1007/s007050050547
Patton JF, Balasuriya UB, Hedges JF, Schweidler TM, Hullinger PJ, MacLachlan NJ.An avirulent, novel variant of equine arteritis virus (EAV; CA95G) was isolated from the semen of a persistently infected Standardbred stallion. The CA95G virus caused subclinical infection and seroconversion in susceptible horses, and virus was isolated only once from blood and nasal secretions collected from 6 experimentally infected horses. Sequence analysis of genes encoding the known EAV structural proteins shows that this highly attenuated strain of EAV is genetically similar to virulent field strains of EAV and, in particular, to a strain of EAV that was isolated during an outbreak of e...