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Topic:Molecular biology

Molecular biology in horses involves the study of molecular processes and genetic mechanisms that underpin equine physiology and health. This field encompasses the analysis of DNA, RNA, proteins, and other biomolecules to understand gene expression, genetic variation, and cellular functions in horses. Techniques such as genomic sequencing, gene expression profiling, and molecular diagnostics are employed to explore topics like hereditary diseases, performance traits, and immune responses in equines. This page assembles peer-reviewed research studies and scholarly articles that investigate the molecular biology of horses, focusing on genetic research, molecular techniques, and their applications in equine science.
Characterization of two polymorphic horse microsatellites: HMS15 and HMS20.
Animal genetics    April 1, 1996   Volume 27, Issue 2 123 
Guérin G, Bertaud M.No abstract available
Four equine dinucleotide repeats at microsatellite loci UCDEQ5, UCDEQ14, UCDEQ46 and UCDEQ62.
Animal genetics    April 1, 1996   Volume 27, Issue 2 129 
Eggleston-Stott ML, DelValle A, Bowling AT, Bautista M, Zahorchak R, Malyj W.No abstract available
Zoo-FISH delineates conserved chromosomal segments in horse and man. Raudsepp T, Frönicke L, Scherthan H, Gustavsson I, Chowdhary BP.Human chromosome specific libraries (CSLs) were individually applied to equine metaphase chromosomes using the fluorescence in situ hybridization (FISH) technique. All CSLs, except Y, showed painting signals on one or several horse chromosomes. In total 43 conserved chromosomal segments were painted. Homoeology could not, however, be detected for some segments of the equine genome. This is most likely related to the very weak signals displayed by some libraries, rather than to the absence of similarity with the human genome. In spite of divergence from the human genome, dated 70-80 million yea...
Cloning and sequencing of an equine insulin-like growth factor I cDNA and its expression in fetal and adult tissues.
General and comparative endocrinology    April 1, 1996   Volume 102, Issue 1 11-15 doi: 10.1006/gcen.1996.0040
Otte K, Rozell B, Gessbo A, Engström W.A cDNA for equine insulin-like growth factor I (IGF I) has been isolated by reverse transcriptase-polymerase chain reaction and subsequently sequenced. The sequenced fragment contained 465 bp including the coding regions for the signal peptide, the entire mature protein, and 4 amino acids into the E-peptide. Like its human counterpart, the mature equine IGF I peptide contains 70 amino acids and was 100% homologous between horse and man. The 49-amino-acid signal peptide had the threonine in position 26 of the human signal peptide substituted by isoleucine. The nucleotide homology across the ent...
Alterations in the equine herpesvirus type-1 (EHV-1) strain RacH during attenuation.
Zentralblatt fur Veterinarmedizin. Reihe B. Journal of veterinary medicine. Series B    March 1, 1996   Volume 43, Issue 1 1-14 doi: 10.1111/j.1439-0450.1996.tb00282.x
Hübert PH, Birkenmaier S, Rziha HJ, Osterrieder N.The equine herpesvirus type-1 modified live-vaccine strain RacH (256th passage on porcine embryonic kidney cells) was investigated by restriction-enzyme analysis and compared to representative plaque isolates of the 12th passage (RacL11, RacL22) and 185th passage (RacM24, RacM36). The restriction patterns of all Rac plaque isolates differed compared with reference strain Ab4. The left UL terminus was shortened by 0.1 kbp and a missing BamHI site led to the fusion of the f and t fragments. In some Rac derivatives, losses of restriction sites without deletions were observed: 1. One BamHI site lo...
Structural investigation of the complexation properties between horse spleen apoferritin and metalloporphyrins.
Proteins    March 1, 1996   Volume 24, Issue 3 314-321 doi: 10.1002/(SICI)1097-0134(199603)24:3<314::AID-PROT4>3.0.CO;2-G
Michaux MA, Dautant A, Gallois B, Granier T, d'Estaintot BL, Précigoux G.Crystallographic studies of L-chain horse spleen apoferritin (HSF) co-crystallized with Pt-hematoporphyrin IX and Snprotoporphyrin IX have brought significant new insights into structure-function relationships in ferritins. Interactions of HSF with porphyrins are discussed. Structural results show that the nestling properties into HSF are dependent on the porphyrin moiety. (Only protoporphyrin IX significantly interacts with the protein, whereas hematoporphyrin IX does not.) These studies additionally point out the L-chain HSF ability to demetalate metalloporphyrins, a result which is of impor...
Role of heme axial ligands in the conformational stability of the native and molten globule states of horse cytochrome c.
Journal of molecular biology    February 16, 1996   Volume 256, Issue 1 172-186 doi: 10.1006/jmbi.1996.0075
Hamada D, Kuroda Y, Kataoka M, Aimoto S, Yoshimura T, Goto Y.One unique aspect of cytochrome c folding concerns the involvement of the covalently attached heme group and its axial ligands. To elucidate the role of the ligands in stabilizing the native and molten globule states, we studied the conformational and thermodynamic features of the iron-free derivative of horse cyctochrome c (porphyrin-cytochrome c). At neutral pH, far-UV circular dichroism suggested that porphyrin-cytochrome c has native-like alpha-helices, whereas near-UV CD suggested that the side-chains are flexible. Its stability against heat or denaturants was much less than that of the i...
Correlation between DNA restriction fragment length polymorphisms in Leptospira interrogans serovar pomona type kennewicki and host animal source.
Journal of clinical microbiology    February 1, 1996   Volume 34, Issue 2 424-425 doi: 10.1128/jcm.34.2.424-425.1996
Bolin CA, Zuerner RL.Isolates (n = 147) of Leptospira interrogans serovar pomona type kennewicki from cattle, swine, horses, and wildlife were analyzed by DNA restriction endonuclease analysis. Restriction fragment length polymorphisms were identified in DNA digested with HpaII, and the restriction fragment length polymorphisms were correlated with the host animal source of the isolates. These results will be useful in understanding the epidemiology of serovar pomona infections in livestock.
13-cis-Retinoic acid affect sheath-shaft interaction of equine hair follicles in vitro.
The Journal of investigative dermatology    February 1, 1996   Volume 106, Issue 2 356-361 doi: 10.1111/1523-1747.ep12343124
Williams D, Siock P, Stenn K.A major challenge to the study of hair follicle growth is an appropriate assay system. Because equine mane follicles are large and noncurved, enabling easy dissection; are readily accessible from a single defined source; and possess a long anagen growth phase, we initiated a study of them in culture. As in our previous studies of human and sheep follicles (Dev Biol 165:469, 1994), we found in this system that transection level dictates the pattern of follicle growth in vitro: follicles transected below the sebaceous gland show a type 1 growth pattern (the shaft grows out with an adherent sheat...
Cloning and analysis of the cDNA for the common alpha-subunit of the donkey pituitary glycoprotein hormones.
Journal of molecular endocrinology    February 1, 1996   Volume 16, Issue 1 9-13 doi: 10.1677/jme.0.0160009
Chopineau M, Stewart F.Reverse transcription-PCR was used to clone the coding region of the donkey (Equus asinus) glycoprotein hormone alpha-subunit transcript from pituitary gland RNA. The donkey alpha-subunit sequence demonstrated considerable identity with the horse (97% at the nucleotide level), confirming the very close evolutionary linkage between these two species. The predicted amino acid sequence revealed that the donkey alpha-subunit has the same unusual C-terminus as the horse alpha-subunit, when compared with all other mammalian alpha-subunits, including a Tyr-His transposition between positions 87 and 9...
Polymorphism of DRA among equids.
Immunogenetics    January 1, 1996   Volume 43, Issue 5 315-317 
Albright-Fraser DG, Reid R, Gerber V, Bailey E.No abstract available
Nucleotide sequence of exons 5 to 9 of the p53 tumour-suppressor gene of the horse (Equus caballus).
DNA sequence : the journal of DNA sequencing and mapping    January 1, 1996   Volume 6, Issue 3 185-187 doi: 10.3109/10425179609010208
Nasir L, Reid SW.An evolutionary conserved 1.3 kb fragment corresponding to the horse p53 tumour suppressor gene was PCR amplified, cloned and the nucleotide sequence determined. The p53 fragment encoded exons 5 to 9 and the intervening introns. The nucleotide sequence and the predicted aminoacid sequence showed a high level of homology with human and donkey p53 sequences.
The inhibition of adenylate cyclase in equine platelets by collagen and by platelet-activating factor.
Platelets    January 1, 1996   Volume 7, Issue 1-2 43-46 doi: 10.3109/09537109609079508
Farndale RW, Napthine CS, Evans RJ, Hayes LJ, Heath MF.Equine platelet aggregation was stimulated by collagen fibres or platelet-activating factor. The action of both ligands was blocked by forskolin or prostaglandin E(1) agents which are known to activate adenylate cyclase. Equine platelet membranes were found to contain adenylate cyclase activity which was inhibited in dose-dependent fashion by both collagen and platelet-activating factor. Platelet-activating factor-induced inhibition was antagonised by WEB2086.
Hyaluronan turnover in the synovial fluid in metacarpophalangeal–and middle carpal joints in standardbred horses.
Acta veterinaria Scandinavica    January 1, 1996   Volume 37, Issue 2 147-151 doi: 10.1186/BF03548107
Lindholm A, Ronéus B, Lindblad G, Jones B.The biological turnover of hyaluronan (sodium hyaluronate) of different molecular weights (0.6 x 10(6) and 2.5 x 10(6) Daltons) was studied in the synovial fluid of the middle carpal and metacarpophalangeal joints of 6 clinically healthy Standardbred horses. The hyaluronan was radioactively labelled with 14C. The biological half-life (t1/2) was calculated from repeated synovial samples after injection of the labelled hyaluronan. The mean t1/2 in the metacarpophalangeal joints was 9.7 h for low molecular weight hyaluronan and 8.9 h for high molecular weight hyaluronan and in the middle carpal j...
[Identification and diagnosis of Taylorella equigenitalis by a DNA amplification method (PCR)].
Schweizer Archiv fur Tierheilkunde    January 1, 1996   Volume 138, Issue 3 115-120 
Miserez R, Frey J, Krawinkler M, Nicolet J.A polymerase chain reaction (PCR) for identification of Taylorella equigenitalis was developed. The oligonucleotide primers are based on the DNA sequence of the rrs gene of T. equigenitalis, encoding for the 16S ribosomal RNA. Analysis of 21 strains of T. equigenitalis from England, USA and Switzerland showed an amplification product of 410 bp with identical Sau3A restriction profile. The sensitivity of the PCR-Assay was estimated to detect 50 to 500 bacteria of T. equigenitalis in a mixture with frequently found contaminants. Further analysis of culture from 60 genital swabs, taken in the cou...
The vasomotor effects of 5-hydroxytryptamine on equine basilar arteries in vitro.
Veterinary research communications    January 1, 1996   Volume 20, Issue 1 61-70 doi: 10.1007/BF00346578
Miyamoto A, Obi T, Nishio A.The vasomotor effects of 5-hydroxytryptamine (5-HT) on isolated equine basilar arteries were studied. 5-HT induced contractions of equine basilar arteries in a concentration-dependent manner, with a pEC50 value (with 95% confidence limits) of 7.35 (7.08-7.62). Similar results were obtained with endothelium-denuded basilar arteries. Contractions were not competitively inhibited by the 5-HT2 receptor antagonist ketanserin at low concentrations of 5-HT. Conversely, at high concentrations of 5-HT, contractions were inhibited by ketanserin in a concentration-dependent manner, with a pA2 value of 8....
Demonstration of three DRB loci in a domestic horse family.
Immunogenetics    January 1, 1996   Volume 44, Issue 6 441-445 doi: 10.1007/BF02602805
Fraser DG, Bailey E.Single-strand conformational polymorphism (SSCP) gel electrophoresis and DNA sequencing were used to characterize the second exon of the horse DRB homologue as well as to identify eight new DRB alleles. The SSCP gels presented a complex pattern, with phenotypes exhibiting between 4 and 13 bands. The DRB SSCP patterns were studied for two families (6 to 13 bands per pattern). For both families, the patterns showed simple Mendelian inheritance. The polymerase chain reaction products from two individuals possessing homozygous major histocompatibility complex (MHC) alleles by descent were cloned a...
Comparison of nucleic and amino acid sequences and phylogenetic analysis of the Gs protein of various equine arteritis virus isolates.
Virus genes    January 1, 1996   Volume 13, Issue 1 87-91 doi: 10.1007/BF00576983
Lepage N, St-Laurent G, Carman S, Archambault D.The genetic variation in equine arteritis virus (EAV) Gs protein encoding gene was investigated. Nucleic and deduced amino acid sequences from eight different EAV isolates (one European, two American and five Canadian isolates) were compared with those of the Bucyrus reference strain. Nucleotide and amino acid identities between these isolates and the Bucyrus reference strain ranged from 92.3 to 96.4%, and 93.2 to 95.5%, respectively. However, phylogenetic tree analysis and estimation of genetic distances based on the Gs protein encoding gene sequences showed that the European prototype Vienna...
Biosynthesis and distribution of leucocyte elastase inhibitor. Production of recombinant inhibitor.
Acta biochimica Polonica    January 1, 1996   Volume 43, Issue 3 497-501 
Kasza A, Korpula-Mastalerz R, Rose-John S, Dubin A.The horse leucocyte elastase inhibitor (HLEI), present in neutrophils, monocytes and bone marrow cells, is apparently a cytoplasmic protein which is not released from cells even in response to stimulation with lipopolysaccharide, phorbol ester, tumour necrosis factor alpha, interleukin-1 or elastin degradation products. Although no expression of the inhibitor was detected in neutrophils, both monocytes and bone marrow cells were efficient in its synthesis. Using a new expression vector pREST5d, recombinant inhibitor was produced in a large quantity in a soluble form, with a yield of 88 mg per ...
Equine severe combined immunodeficiency: a defect in V(D)J recombination and DNA-dependent protein kinase activity.
Proceedings of the National Academy of Sciences of the United States of America    December 5, 1995   Volume 92, Issue 25 11485-11489 doi: 10.1073/pnas.92.25.11485
Wiler R, Leber R, Moore BB, VanDyk LF, Perryman LE, Meek K.V(D)J rearrangement is the molecular mechanism by which an almost infinite array of specific immune receptors are generated. Defects in this process result in profound immunodeficiency as is the case in the C.B-17 SCID mouse or in RAG-1 (recombination-activating gene 1) or RAG-2 deficient mice. It has recently become clear that the V(D)J recombinase most likely consists of both lymphoid-specific factors and ubiquitously expressed components of the DNA double-strand break repair pathway. The deficit in SCID mice is in a factor that is required for both of these pathways. In this report, we show...
Cloning of a DNA repeat element from horse: DNA sequence and chromosomal localization.
Genome    December 1, 1995   Volume 38, Issue 6 1132-1138 doi: 10.1139/g95-150
Broad TE, Forrest JW, Lewis PE, Pearce PD, Phua SH, Pugh PA, Stewart-Scott IA.A DNA repeat element, revealed initially by digestion of horse DNA with TaqI, was cloned and characterized by Southern and in situ hybridization studies and nucleotide sequencing. The clone, e4/1, consisted of 32 tandem reiteration of a unit repeat of 21-22 bp, and produced multilocus DNA fingerprinting profiles that were useful for parentage analysis in horses. The tandem repeat element was shown by in situ hybridization to be localized in the centromeres of the acrocentric but not metacentric classes of horse chromosomes.
The synthesis of 19-norandrostenedione from dehydroepiandrosterone in equine placenta is inhibited by aromatase inhibitors 4-hydroxyandrostenedione and fadrozole.
Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology    December 1, 1995   Volume 112, Issue 4 613-618 doi: 10.1016/0305-0491(95)00117-4
Moslemi S, Silberzahn P, Gaillard JL.19-Norandrostenedione was synthesized in vitro from dehydroepiandrosterone by explants of equine full-term placenta. The synthesis of 19-norandrostenedione was inhibited by two specific aromatase inhibitors, 4-hydroxyandrostenedione and fadrozole.
Families of tandemly repeated DNA elements from horse: cloning, nucleotide sequence, and organization.
Genome    December 1, 1995   Volume 38, Issue 6 1285-1289 doi: 10.1139/g95-169
Broad TE, Ede AJ, Forrest JW, Lewis PE, Phua SH, Pugh PA.DNA repeats, revealed initially by digestion of horse DNA with restriction enzymes, were cloned and characterized by cross-hybridization studies and nucleotide sequencing. The Sau-like family of tandem repeats contained two classes of repetitive elements with unit repeats of about 80 bp that shared no sequence similarity. Both unit repeats were present, frequently in tandem, in cloned segments of horse DNA of less than 600 bp. Evidence is presented, based on their ladderlike patterns of hybridization to horse DNA and their high level of similarity to published sequences of satellites from equi...
Sarcocystis falcatula from passerine and psittacine birds: synonymy with Sarcocystis neurona, agent of equine protozoal myeloencephalitis.
The Journal of parasitology    December 1, 1995   Volume 81, Issue 6 930-935 
Dame JB, MacKay RJ, Yowell CA, Cutler TJ, Marsh A, Greiner EC.Equine protozoal myeloencephalitis (EPM) is a neurologic disease of horses caused by Sarcocystis neurona. The horse is a dead-end host for S. neurona and the definitive and intermediate hosts have not previously been identified. We hypothesized that S. neurona is actually Sarcocystis falcatula, a parasite that cycles in nature between Virginia opossums (Didelphis virginiana) and any of a variety of avian intermediate hosts. We extracted DNA from S. falcatula sarcocysts in the muscle of a brown-headed cowbird (Molothrus ater) and from schizonts in a fixed specimen of lung from a Moluccan cockat...
Mutations in the equine plasma transferrin and esterase systems.
Animal genetics    December 1, 1995   Volume 26, Issue 6 407-411 doi: 10.1111/j.1365-2052.1995.tb02692.x
Bell K, Arthur H, Breen M.Eleven apparent mutations of the equine plasma transferrin and esterase gene (10 in TF and one in ES) were found in an analysis of approximately 240,000 thoroughbred horses. Eight of the transferrin mutations produced variants not previously recognized in horses. In the two remaining transferrin mutations and the esterase mutation, reduced plasma concentrations of the proteins were demonstrated by immunological techniques and together with the family data indicated the existence of 'null' alleles.
The detection of latency-associated transcripts of equine herpesvirus 1 in ganglionic neurons.
The Journal of general virology    December 1, 1995   Volume 76 ( Pt 12) 3113-3118 doi: 10.1099/0022-1317-76-12-3113
Baxi MK, Efstathiou S, Lawrence G, Whalley JM, Slater JD, Field HJ.Neural tissues from specific pathogen-free ponies that had been experimentally infected with equine herpesvirus 1 (EHV-1) were analysed by in situ hybridization. Digoxigenin-labelled EHV-1 BamHI fragments spanning almost the entire EHV-1 genome were hybridized to RNA in tissue sections from latently infected trigeminal ganglia. The BamHI E fragment detected EHV-1 RNA antisense to gene 63 (HSV-1 homologue ICP0) in a small number of neurons. Sixteen other BamHI fragments gave negative results in 20 sections tested with each fragment. Latency associated transcripts (LATs) were localized to the ne...
Transmembrane signalling: protein tyrosine phosphorylation and platelet activation.
Equine veterinary journal    November 1, 1995   Volume 27, Issue 6 407-410 doi: 10.1111/j.2042-3306.1995.tb04419.x
Farndale RW, Barnes MJ.No abstract available
Protein tyrosine phosphorylation in equine platelets: the effect of stimulation by thrombin and platelet-activating factor (PAF).
Equine veterinary journal    November 1, 1995   Volume 27, Issue 6 448-458 doi: 10.1111/j.2042-3306.1995.tb04426.x
Dillon AM, Heath MF.Protein tyrosine phosphorylation (PTP) in thrombin- and platelet-activating factor (PAF)-stimulated equine platelet activation was investigated in the absence and presence of 2 protein tyrosine kinase inhibitors (PTKIs), methyl 2,5-dihydroxycinnamate (MDHC) and genistein. Washed equine platelets aggregated irreversibly in response to thrombin or PAF in an agonist concentration dependent fashion. MDHC produced an MDHC concentration and time dependent inhibitory effect on rate and extent of thrombin- and PAF-induced aggregations, whereas the effect of genistein on the same parameters was only ge...
Demonstration of tissue-specific promoters in nonprimate species that express aromatase P450 in placentae.
Biology of reproduction    November 1, 1995   Volume 53, Issue 5 1151-1159 doi: 10.1095/biolreprod53.5.1151
Hinshelwood MM, Liu Z, Conley AJ, Simpson ER.Conversion of androgens to estrogens is catalyzed by aromatase P450 (P450arom; the product of the CYP19 gene). Regulation of tissue-specific expression of P450arom in humans is due, in part, to alternative transcriptional start sites that arise as a consequence of the use of granulosa cells and placental tissue from cows, horses, and pigs (ungulates) in order to determine whether these species, like the human, utilize tissue-specific promoters to drive P450arom expression. The majority of transcripts in the placenta have 5'-termini that differ from those in the ovary upstream of a common site ...
Variable-temperature study of the heme-reorientation process in equine myoglobin.
Biochimica et biophysica acta    October 25, 1995   Volume 1252, Issue 2 295-299 doi: 10.1016/0167-4838(95)00115-b
Yee S, Peyton DH.The redistribution of the initially-formed myoglobin heme-insertion isomers from the initially formed 50/50 mixture to the equilibrium ratio of 90/10 has long been assumed to occur by one of two mechanisms, both of which require the rupture of the heme iron-protein bond (La Mar, G.N., Toi, H. and Krishnamoorthi, K. (1984) J. Am. Chem. Soc. 106, 6395-6401). In this study we compared the use of nuclear magnetic resonance and optical spectroscopic techniques as methods for studying the reorientation of heme within myoglobin. We found that kinetics determinations of the heme insertion isomer redis...