Principal Component Analysis (PCA) is a statistical technique used to simplify complex datasets by reducing their dimensionality while preserving as much variance as possible. In equine research, PCA can be applied to various types of data, including genetic, physiological, and performance metrics, to identify patterns and relationships that may not be immediately apparent. By transforming original variables into a new set of uncorrelated variables called principal components, researchers can effectively analyze and interpret large datasets. PCA facilitates the identification of key factors influencing traits or conditions in horses, aiding in areas such as genetic studies, disease susceptibility, and performance optimization. This page compiles peer-reviewed research studies and scholarly articles that explore the application, methodology, and findings of Principal Component Analysis in equine science.
Williams GE, Silverman BW, Wilson AM, Goodship AE.To assess the force plate as a diagnostic aid in equine locomotor abnormalities, particularly for abnormalities such as navicular disease that do not have specific diagnostic criteria. Methods: 17 Thoroughbreds without observable locomotor abnormalities (group A), 6 Thoroughbreds with superficial digital flexor tendon injury (group B), and 8 Thoroughbreds with navicular disease (group C). Methods: Using a force plate, ground reaction force patterns were recorded at the trot. Peak limb vertical force and force/time curve parameters were derived from 4 identifiable points at the beginning and en...
Tikhonov VN, Cothran EG, Kniazev SP.This study was the first to analyze the polymorphic characteristics of a wide range of biochemical markers in aboriginal Yakut horses. A total of 124 alleles, including 48 alleles of seven blood-group loci and 76 alleles of ten loci for enzymes and other proteins, were studied. For these polymorphic systems, a computer analysis of the genetic distances between 85 horse breeds of different origin from all parts of the world was performed. The low level of hereditary variation in the Yakut horses confirmed that this breed is old and has long been an isolated population. Phylogenetic analysis dem...
Muñoz A, Santisteban R, Rubio MD, Vivo R, Agüera EI, Escribano BM, Castejón FM.The fitness of 8 Andalusian horses between 3 and 4 years of age was analysed. The animals were subjected to an exercise test on a sandy track consisting of 2 stages of different intensities. The first stage was of submaximal intensity at 4 speeds which increased progressively (4.17, 5.56, 6.94 and 8.33 m/sec.) covering a distance of 1,000 m in each level. Between each of these speeds, the horses rested for 2 min. The second stage was a maximal speed test over the same distance carried out 2 min after the ending of the maximal phase. Data of heart rate, plasma lactate concentration, velocity, P...
Rivero JL.To describe an applied method for quantitative estimation of training condition in horses. Methods: 17 sedentary adult (5 to 14 years old) stallions of several breeds endurance trained for 3 months. Methods: Muscle biopsy specimens from 2 depths (20 and 60 mm) of the gluteus medius muscle were obtained before and after training and were analyzed for fiber type distribution, mean cross-sectional area, relative fiber area, and mean number of capillaries in contact with each fiber type relative to their mean area. Fiber types were designated as types 1, 2A, and 2B (high, low, and moderate myosin ...
Rivero JL, Henckel P.Biopsies were taken from three different depths of the gluteus medius muscle of 36 endurance horses aged between four and 17 years. Twenty of the horses were considered excellent performers according to their three fastest records in endurance events over the previous two or three years. The other 16 horses were moderate performers, with a mean racing speed < 3.5 ms-1 (in 120 to 180 km endurance rides), < 4.0 ms-1 (in 80 to 120 km endurance rides) or < 3.75 ms-1 (in 40 to 60 km endurance rides). The biopsy specimens were analysed for fibre type distribution (type I, IIA and IIB), fibr...
Misumi K, Hirakawa A, Sakamoto H, Shimizu R.To investigate whether the running exercise fitness of individual horses could be assessed by a standardized swimming exercise test, the results of multivariate analysis of the exercise parameters measured during incremental running and swimming tests were compared. Ten thoroughbred horses were subjected to different types of exercise tests on a track or in a pool, and the maximum heart rate during and the blood lactate concentration immediately after the exercise were examined. Serial exercise parameters (VLA2, VLA4, LA0, V150, V200, HRS, HRLA2, HRLA4) referred to as the indices related to th...
Strigazzi A, Bianchi M.The dimensional distributions of the adipocytes in Equus caballus in many subjects and in many regions have been studied: such distributions turn out to be in good approximation galtonian ones. Furthermore, all the logarithm populations of the cell diameters have significantly the same variance. The used statistical methods (ANOVA two way with replications, and TUKEY -test) indicate an extremely significant different among the various regions (the smallest cells are in the supra-orbital fossa, the greatest ones are in the abdominal subserous floor).
Gueguen L, Palme R, Jego P, Henry S, Hausberger M.Many studies focus on animal welfare in terms of specific, either behavioural or physiological, indicators or on the impact of a particular management factor. However, an animal's welfare state results from the individual's perception of its general environment, which has consequences at both behavioural and physiological levels. Previous research on horses has shown that different riding schools could be characterised by different emotional/cognitive profiles of horses, in relation sometimes with one single management factor. In the present study, we aimed at determining if such facility-spec...
Ding W, Gong W, Bou T, Shi L, Lin Y, Shi X, Li Z, Wu H, Dugarjaviin M, Bai D.The core objective of racehorse breeding is to enhance the speed and endurance of the horses. The Grassland-Thoroughbred is an emerging horse breed developed in northern China in recent years, characterized by excellent speed performance, enduring stamina, and strong environmental adaptability. However, research on the genetic characteristics within this breed and the genes associated with athletic performance remains relatively limited. We conducted whole-genome resequencing of Grassland-Thoroughbred F1, F2, F3, and the crossbred population (CY) and obtained a total of 4056.23 Gb of high-qual...
Corbally AF, Mulligan FJ, Sweeney T, Fahey AG.This study examines the associations between linearly scored phenotypic traits and auction sales prices of young event horses in Ireland, aiming to identify key traits influencing market value. Data from 307 horses sold at public auctions (2022-2023) were analysed using regression analysis, binary optimisation, and Principal Component Analysis (PCA). Regression identified Head-neck Connection, Quality of Legs, Walk length of Stride, and Scope as highly significant predictors of sales price ( < 0.001), with Length of Croup, Trot Elasticity, Trot Balance, and Take-off Direction also significa...
Staiger EA, Pereira de Toledo A, Rizzato Paschoal V, Patterson Rosa L.Horse gaits are a trait highly selected and prized in diverse breeds. Meanwhile, gait classification relies mostly on subjective visual observations by evaluators. Noninvasive equipment able to track locomotion in horses and output quantitative gait parameters is not only helpful in evaluating locomotion but also in designating gait types and its variations. Equine locomotion pattern designation based solely on observer evaluation can be subjective; therefore, utilizing tools that provide quantitative results and track individual limb movements, especially during intermediate-speed gaits, can ...
Freitag GP, de Lima LGF, Kozicki LE, Souza FA, Nogueira E, Ribeiro LB.This study investigated the influence of morphometric characteristics on performance in Quarter Horses competing in barrel racing. Methods: A total of 125 horses were assessed using 28 linear and angular body measurements derived from standardized left-side photographs captured via smartphone and analyzed with open-source software. Results: Measurements were subjected to exploratory factor analysis, extracting six principal components (forequarters, hindquarters, midsection, posterior angles, scapular traits, age and weight), which together explained 83.0 % of the morphological variance. Foreq...
Jlassi M, Dhifalli I, Ouled Ahmed H, Lasfar F, El Gtari M, Jemmali B.The genetic diversity and population structure of Tunisian Arabian horses were assessed using highly polymorphic microsatellite markers, which are critical for conservation and breeding programs. Despite the cultural and economic importance of Arabian horses in Tunisia, molecular data supporting their management remain limited. In this study, DNA from 130 horses was genotyped with 17 ISAG-FAO-recommended microsatellites to evaluate diversity within Eastern and Western Arabian lineages and their relationship to Thoroughbreds. Eastern Arabians showed an average of 5.176 alleles per locus, observ...
Dash SK, Panda S, Karna DK, Mishra C, Kalaignazhal G.The present study aimed to identify significant morphometric traits in Malkangiri ponies of Odisha through principal component analysis. The data were collected randomly from 200 ponies aged more than five years and 13 morphometric traits alongwith three indices were recorded. The mean height at wither, height at croup, body length, chest girth, punch girth, height at forearm, height at hock, fetlock to coronet, chest width, neck circumference, poll to wither, wither to croup and croup to head of the tail were 126.7 ± 0.39, 122.6 ± 0.29, 107.9 ± 0.2, 122 ± 0.31, 118.6 ±â...
