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Topic:Epidemiology

Epidemiology in horses involves the study of the distribution and determinants of health-related states and events in equine populations. It encompasses the investigation of patterns, causes, and effects of diseases and health conditions within horse populations. This field of study aims to identify risk factors for disease and targets for preventive healthcare. Key components of equine epidemiology include disease surveillance, outbreak investigation, and the study of disease dynamics within herds or regions. Research in this area often focuses on infectious diseases, zoonotic diseases, and the impact of environmental factors on equine health. This page compiles peer-reviewed research studies and scholarly articles that explore various aspects of epidemiology in horses, including disease prevalence, transmission pathways, and strategies for disease prevention and control.
Challenges to develop an equine herpesvirus vaccine in China.
The Journal of infection    February 1, 2020   Volume 80, Issue 5 578-606 doi: 10.1016/j.jinf.2020.01.013
Ji C, Cai S, Lu G, Zhang G.No abstract available
Heterogeneity of antimicrobial susceptibility testing results for sulfamethoxazole/trimethoprim obtained from clinical equine Staphylococcus aureus isolates using different methods.
Veterinary microbiology    February 1, 2020   Volume 242 108600 doi: 10.1016/j.vetmic.2020.108600
Scholtzek AD, Hanke D, Eichhorn I, Walther B, Lübke-Becker A, van Duijkeren E, Köck R, Schwarz S, Feßler AT.Based on antimicrobial susceptibility testing (AST), correct classifications as susceptible, intermediate or resistant are challenging for some antimicrobial agent-bacterial species combinations. In this study, we investigated 19 equine Staphylococcus aureus isolates for their susceptibility to the combination sulfamethoxazole/trimethoprim (SXT) by using broth microdilution (BMD), agar disk diffusion (DD) and automated test systems. To elucidate the presence of the corresponding genetic resistance properties among the isolates, whole genome sequence analysis was performed and the genomes were ...
Zoonotic potential of Enterocytozoon bieneusi and Giardia duodenalis in horses and donkeys in northern China.
Parasitology research    January 31, 2020   Volume 119, Issue 3 1101-1108 doi: 10.1007/s00436-020-06612-8
Li F, Wang R, Guo Y, Li N, Feng Y, Xiao L.Limited data are available on infection rates and genetic identity of Enterocytozoon bieneusi and Giardia duodenalis in horses and donkeys. In this study, 865 fecal specimens were collected from donkeys (n = 540) and horses (n = 325) in three provinces and autonomous regions in northern China during 2015-2019. Enterocytozoon bieneusi was detected and genotyped by PCR and sequence analyses of the ribosomal internal transcribed spacer (ITS) and G. duodenalis was detected and genotyped by PCR and sequence analyses of the β-giardin, glutamate dehydrogenase, and triosephosphate isomerase g...
Fatal intestinal inflammatory lesions in equids in California: 710 cases (1990-2013).
Journal of the American Veterinary Medical Association    January 31, 2020   Volume 256, Issue 4 455-462 doi: 10.2460/javma.256.4.455
Macías-Rioseco M, Hill AE, Uzal FA.To determine incidences and underlying causes of fatal intestinal inflammatory lesions (FIILs) and demographic characteristics of affected equids necropsied at any of the California Animal Health and Food Safety Laboratory facilities between January 1, 1990, and April 16, 2013. Methods: 710 equids with FIILs, including colitis, duodenitis, enteritis, enterocolitis, enteropathy, enterotyphlitis, gastritis, gastroenteritis, ileitis, jejunitis, typhlitis, or typhlocolitis, alone or in combination. Methods: The medical records were reviewed, and data collected included animal age, sex, geographic ...
Special Issue “Equine Viruses”: Old “Friends” and New Foes?
Viruses    January 29, 2020   Volume 12, Issue 2 doi: 10.3390/v12020153
Paillot R.The Food and Agriculture Organization of the United Nations has recently estimated that the world equid population exceeds 110 million (FAOSTAT 2017).[...].
Serological surveillance and clinical investigation of glanders among indigenous equines in India from 2015 to 2018.
Transboundary and emerging diseases    January 28, 2020   Volume 67, Issue 3 1336-1348 doi: 10.1111/tbed.13475
Singha H, Shanmugasundaram K, Tripathi BN, Saini S, Khurana SK, Kanani A, Shah N, Mital A, Kanwar P, Bhatt L, Limaye V, Khasa V, Arora R, Gupta S....Equine glanders is an infectious and notifiable bacterial disease caused by Burkholderia mallei. The disease has been reported in South American, African and Asian countries including India. Here, we present the outcome of glanders serosurveillance carried out between January 2015 and December 2018 to know the status of equine glanders among different states in India. A total of 102,071 equid sera from 299 districts of twenty-one states and one union territory were tested for glanders. Samples were screened with Hcp1 indirect ELISA followed by confirmatory diagnosis by CFT. During this four-ye...
An emerging equine parvovirus circulates in thoroughbred horses in north Xinjiang, China, 2018.
Transboundary and emerging diseases    January 28, 2020   Volume 67, Issue 3 1052-1056 doi: 10.1111/tbed.13443
Xie J, Tong P, Zhang A, Song X, Zhang L, Shaya N, Kuang L.In 2015, a novel equine parvovirus, equine parvovirus-cerebrospinal fluid (EqPV-CSF), was identified from cerebrospinal fluid of a horse with neurological signs and lymphocytosis in USA. In our study, an EqPV-CSF-like virus was detected from 15 serum samples of 65 imported thoroughbred horses during custom quarantine in north Xinjiang province, China. Further field investigation in several major horse-producing areas in Xinjiang using specific PCR showed that this virus was detected mainly in thoroughbred horses (39/154 positive) previously imported, not in local breeds (0/127 positive). Phylo...
Stress conditions do not affect Theileria equi parasitemia levels in sub-clinically infected horses.
Ticks and tick-borne diseases    January 27, 2020   Volume 11, Issue 3 101384 doi: 10.1016/j.ttbdis.2020.101384
Tirosh-Levy S, Gottlieb Y, Steinman A.Stress has been suggested as a risk factor for Theileria equi peracute disease and may lead to relapse in clinical signs in chronically infected horses. The aim of this study was to assess the effect of stress on T. equi parasitemia in sub-clinically infected horses in two settings: horses hospitalized at a veterinary teaching hospital and horses from an endurance farm. Blood samples were collected from the hospitalized horses (n = 32) upon admission (T0) and at discharge (T1) from the hospital, and results were compared between horses that underwent surgery (stress) and other hospitalized...
Overview of spatio-temporal distribution inferred by multi-locus sequence typing of Taylorella equigenitalis isolated worldwide from 1977 to 2018 in equidae.
Veterinary microbiology    January 24, 2020   Volume 242 108597 doi: 10.1016/j.vetmic.2020.108597
Duquesne F, Merlin A, Pérez-Cobo I, Sedlák K, Melzer F, Overesch G, Fretin D, Iwaniak W, Breuil MF, Wernery U, Hicks J, Agüero-García M....The accurate identification of Taylorella equigenitalis strains is essential to improve worldwide prevention and control strategies for contagious equine metritis (CEM). This study compared 367 worldwide equine strains using multilocus sequence typing according to the geographical origin, isolation year and equine breed. The strains were divided into 49 sequence types (STs), including 10 described for the first time. Three major and three minor clonal complexes (CCs), and 11 singletons, were identified. The genetic heterogeneity was low (0.13 STs/strain) despite the wide diversity of geographi...
Compilation of 29 years of postmortem examinations identifies major shifts in equine parasite prevalence from 2000 onwards.
International journal for parasitology    January 23, 2020   Volume 50, Issue 2 125-132 doi: 10.1016/j.ijpara.2019.11.004
Sallé G, Guillot J, Tapprest J, Foucher N, Sevin C, Laugier C.Horses are infected by a wide range of parasite species that form complex communities. Parasite control imposes significant constraints on parasite communities whose monitoring remains, however, difficult to track through time. Postmortem examination is a reliable method to quantify parasite communities. Here, we compiled 1,673 necropsy reports accumulated over 29 years, in the reference necropsy centre from Normandy (France). The burden of non-strongylid species was quantified and the presence of strongylid species was noted. Details of horse deworming history and the cause of death were reg...
Evaluation of Return Rates to Races in Racehorses After Tendon Injuries: Lesion-Related Parameters.
Journal of equine veterinary science    January 23, 2020   Volume 87 102931 doi: 10.1016/j.jevs.2020.102931
Ülke ÇG, Deniz SI, Nureddin Ç.Metacarpal tendon diseases are important problems that may cause a decrease in performance and even may finish sport life in equine athletes. In this study, it was aimed to evaluate the ratio of return to races and the time of staying away from races and also to detect the prognostic value of ultrasonographic findings in Thoroughbred and Arabian racehorses with metacarpal flexor tendon injury or peritendonitis. Of 120 cases, 84 (70.0%) returned to races. Among these, 82.1% had tendonitis (69/84) and 17.9% peritendonitis (15/84). Among the cases being unable to return to races, 91.7% had tendon...
A Cross-Sectional Survey of the Training and Management of a Cohort of 2-Year-Old Standardbred Racehorses in New Zealand.
Journal of equine veterinary science    January 23, 2020   Volume 87 102936 doi: 10.1016/j.jevs.2020.102936
Legg K, Gee E, Bolwell C, Bridges J, Rogers CW.There are limited data on the training and management practices of Standardbred trainers in New Zealand. The aims of this study were to describe the 2-year-old training practices of Standardbred trainers and to examine if there were differences in the production process between public (commercial) and amateur (licensed-to-train) trainers. An online Qualtrics survey was conducted after the 2016/7 racing season and completed by 154 Standardbred trainers, 88 (57%) of which had 2-year-olds in training. Descriptive statistics were used to describe the data stratified by public and licensed-to-train...
Childhood horse and donkey bites; a single tertiary health center experience in a rural area.
Avicenna journal of medicine    January 23, 2020   Volume 10, Issue 1 1-5 doi: 10.4103/ajm.ajm_158_19
Bucak IH, Turgut K, Almis H, Turgut M.The aim of this study was to examine the characteristics of patients presenting to a pediatric emergency department in a rural province of Turkey due to horse and donkey bites and to analyze whether these features differ from those of more common animal bites in rural areas. Methods: The records of patients presenting to the pediatric emergency department of a tertiary hospital due to horse and donkey bites over a 3-year period were examined retrospectively. Demographic data, month of presentation, animal species involved (horse or donkey), the body area bitten, treatment applied to the wound ...
Theriogenology Question of the Month.
Journal of the American Veterinary Medical Association    January 22, 2020   Volume 256, Issue 3 309-313 doi: 10.2460/javma.256.3.309
Klingensmith EE, Cox OF, Castillo JM, Gorenberg EB, Fenn MS, Divers TJ, Cheong SH, de Amorim MD.No abstract available
A Common Practice of Widespread Antimicrobial Use in Horse Production Promotes Multi-Drug Resistance.
Scientific reports    January 22, 2020   Volume 10, Issue 1 911 doi: 10.1038/s41598-020-57479-9
Álvarez-Narváez S, Berghaus LJ, Morris ERA, Willingham-Lane JM, Slovis NM, Giguere S, Cohen ND.The practice of prophylactic administration of a macrolide antimicrobial with rifampin (MaR) to apparently healthy foals with pulmonary lesions identified by thoracic ultrasonography (i.e., subclinically pneumonic foals) is common in the United States. The practice has been associated epidemiologically with emergence of R. equi resistant to MaR. Here, we report direct evidence of multi-drug resistance among foals treated with MaR. In silico and in vitro analysis of the fecal microbiome and resistome of 38 subclinically pneumonic foals treated with either MaR (n = 19) or gallium maltolate (...
Serological and molecular detection of selected hemoprotozoan parasites in donkeys in West Omdurman, Khartoum State, Sudan.
The Journal of veterinary medical science    January 22, 2020   Volume 82, Issue 3 286-293 doi: 10.1292/jvms.19-0534
Elata A, Mossaad E, Satti R, Matar N, Ohari Y, Xuan X, Inoue N, Suganuma K.In Sudan, donkeys are important animals, providing transportation and income possibilities. However, the prevalence of parasites in donkeys in Sudan has not been thoroughly characterized. Accordingly, in this study, we aimed to detect selected hemoprotozoan parasites in donkeys in West Omdurman, Khartoum State, Sudan, wherein people depend mainly on donkeys for their daily life. In total, 198 blood samples collected from donkeys in a local market in West Omdurman, were screened using serological and molecular diagnostic techniques. Serologically, 52 (26.3%), 56 (28.3%), and 19 (9.6%) samples w...
Osteoarticular Infection in Three Young Thoroughbred Horses Caused by a Novel Gram Negative Cocco-Bacillus.
Case reports in veterinary medicine    January 19, 2020   Volume 2020 9785861 doi: 10.1155/2020/9785861
Hudson BJ, Chicken C, Blishen A, Todhunter KH, Begg AP, Chan L, Karagiannis T, Raymond B, Bogema D, Adkins AR, O'Sullivan CB, O'Rourke BA....We describe three cases of osteoarticular infection (OAI) in young thoroughbred horses in which the causative organism was identified by MALDI-TOF as . The pattern of OAI resembled that reported with infection in humans. Analysis by 16S rRNA PCR enabled construction of a phylogenetic tree that placed the isolates closer to and , rather than . Average nucleotide identity (ANI) comparison between the new isolate and and however revealed low probability that the new isolate belonged to either of these species. This preliminary analysis suggests the organism isolated is a previously unrecognis...
Codon usage bias of H3N8 equine influenza virus – An evolutionary perspective.
The Journal of infection    January 17, 2020   Volume 80, Issue 6 671-693 doi: 10.1016/j.jinf.2020.01.004
Ou J, Chen R, Yan Z, Ou S, Dong N, Lu G, Li S.No abstract available
Notes from the Field: Multistate Outbreak of Eastern Equine Encephalitis Virus – United States, 2019.
MMWR. Morbidity and mortality weekly report    January 17, 2020   Volume 69, Issue 2 50-51 doi: 10.15585/mmwr.mm6902a4
Lindsey NP, Martin SW, Staples JE, Fischer M.No abstract available
Caution at choosing a particular colony-forming unit from faecal Escherichia coli: it may not represent the sample profile.
Letters in applied microbiology    January 17, 2020   Volume 70, Issue 3 130-136 doi: 10.1111/lam.13252
Maciel JF, Gressler LT, da Silveira BP, Dotto E, Balzan C, Matter LB, Siqueira FM, de Vargas APC.Data about phylogenetic classification of Escherichia coli colonizing calves, lambs and foals are routinely neglected and restricted to outdated methodologies, even in the context of antimicrobial susceptibility (AS) testing. Thus, the aim of this study was to determine the phylogenetic diversity and the AS profile of E. coli colony-forming units (CFUs) from faecal samples of healthy animals. Five CFUs of E. coli were randomly selected from each faecal culture of calves (n = 13), foals (n = 13) and lambs (n = 13), totalizing 195 CFUs phylo-typed by quadruplex PCR. The AS profile of five ...
The composition of the perinatal intestinal microbiota in horse.
Scientific reports    January 16, 2020   Volume 10, Issue 1 441 doi: 10.1038/s41598-019-57003-8
Husso A, Jalanka J, Alipour MJ, Huhti P, Kareskoski M, Pessa-Morikawa T, Iivanainen A, Niku M.The establishment of the intestinal microbiota is critical for the digestive and immune systems. We studied the early development of the rectal microbiota in horse, a hindgut fermenter, from birth until 7 days of age, by qPCR and 16S rRNA gene amplicon sequencing. To evaluate initial sources of the foal microbiota, we characterised dam fecal, vaginal and oral microbiotas. We utilised an amplicon sequence variant (ASV) pipeline to maximise resolution and reproducibility. Stringent ASV filtering based on prevalence and abundance in samples and controls purged contaminants while preserving intest...
Prevalence of Trypanosoma evansi in livestock in Palestine.
Parasites & vectors    January 13, 2020   Volume 13, Issue 1 21 doi: 10.1186/s13071-020-3894-9
Ereqat S, Nasereddin A, Al-Jawabreh A, Al-Jawabreh H, Al-Laham N, Abdeen Z.Trypanosoma evansi is the causative agent of surra, a disease that occurs in many animal species. The disease is responsible for substantial losses in global production and can be fatal if not diagnosed early. This study aims to determine the prevalence of T. evansi in livestock, equids and dromedary camels in Palestine. Methods: Blood samples were collected during 2015-2017 from domesticated animals (n = 259 animals; 77% females and 23% males) including camels (n = 87), horses (n = 46), donkeys (n = 28), mules (n = 2), sheep (n = 49) and goats (n = 48) from eight districts: Ariha (Jericho), N...
Equine Herpesvirus-I Infection in Horses: Recent Updates on its Pathogenicity, Vaccination, and Preventive Management Strategies.
Journal of equine veterinary science    January 11, 2020   Volume 87 102923 doi: 10.1016/j.jevs.2020.102923
Khusro A, Aarti C, Rivas-Caceres RR, Barbabosa-Pliego A.Equine herpesvirus-1 (EHV-1) is one of the most common and ubiquitous viral pathogens infecting equines, particularly horses worldwide. The EHV-1 is known to induce not only humoral but also cellular immune responses in horses. Respiratory distress, abortion in pregnant mares, neurological disorders, and neonatal foal deaths represent EHV-1 infection. Despite the limited success of inactivated, subunit, live, and DNA vaccines, over the past few decades, vaccination remains the prime preventive option to combat EHV-1 infection in horses. However, current vaccines lack the potentiality to protec...
Molecular and genomic characterization of a novel equine molluscum contagiosum-like virus.
The Journal of general virology    January 10, 2020   Volume 102, Issue 3 001357 doi: 10.1099/jgv.0.001357
Ehmann R, Brandes K, Antwerpen M, Walter M, V Schlippenbach K, Stegmaier E, Essbauer S, Bugert J, Teifke JP, Meyer H.Cases of pox-like lesions in horses and donkeys have been associated with poxviruses belonging to different genera of the family . These include the orthopoxviruses vaccinia virus (VACV), horsepoxvirus (HPXV) and cowpoxvirus (CPXV), as well as a potentially novel parapoxvirus and molluscum contagiosum virus (MOCV). However, with the exception of VACV, HPXV and CPXV, the genomic characterization of the causative agents remains largely elusive with only single short genome fragments available. Here we present the first full-length genome sequence of an equine molluscum contagiosum-like virus (EM...
Editorial: Current Research in Equid Herpesvirus Type-1 (EHV-1).
Frontiers in veterinary science    January 10, 2020   Volume 6 492 doi: 10.3389/fvets.2019.00492
Stokol T, Soboll Hussey G.No abstract available
Prevalence and multilocus analysis of Giardia duodenalis in racehorses in China.
Parasitology research    January 9, 2020   Volume 119, Issue 2 483-490 doi: 10.1007/s00436-019-06594-2
Qi M, Ji X, Zhang Y, Wei Z, Jing B, Zhang L, Lin X, Karim MR, Wang H, Sun M.Giardia duodenalis is a zoonotic intestinal parasite infecting humans and mammals worldwide. In this study, we evaluated the prevalence of G. duodenalis in racehorses in China and genetically characterized it. In total, 621 fecal samples were collected from racehorses at 17 equestrian clubs in 15 cities in China. Forty-eight (7.7%) animals from 11 equestrian clubs were positive for G. duodenalis of assemblages A (n = 10), B (n = 36), and E (n = 2), based on the small subunit ribosomal RNA (SSU rRNA) gene. Statistically significant differences in the prevalence of this parasite were...
Identification and Characterization of the First Equine Parainfluenza Virus 5.
Virologica Sinica    January 8, 2020   Volume 35, Issue 2 245-247 doi: 10.1007/s12250-019-00185-2
Xie J, Tong P, Zhang A, Zhang L, Song X, Kuang L.No abstract available
Prevalence and morphological and molecular characteristics of Sarcocystis bertrami in horses in China.
Parasite (Paris, France)    January 7, 2020   Volume 27 1 doi: 10.1051/parasite/2019078
Ma CL, Ye YL, Wen T, Huang ZM, Pan J, Hu JJ, Tao JP, Song JL.Three cyst-forming Sarcocystis species have been identified in horsemeat; however, there exists considerable confusion concerning their relationships. Here, 74% (34/46) of the examined tissue samples from horses contained sarcocysts based on examination by light microscopy (LM), and the organism was identified as Sarcocystis bertrami based on cyst structure. The S. bertrami cysts were microscopic (up to 6750 μm in length) and exhibited a striated wall with 2.0-5.1 μm villar protrusions (vps) under LM. Transmission electron microscopy (TEM) observations showed that the vps were tightly pack...
Zoonotic spillover infections with Borna disease virus 1 leading to fatal human encephalitis, 1999-2019: an epidemiological investigation.
The Lancet. Infectious diseases    January 7, 2020   Volume 20, Issue 4 467-477 doi: 10.1016/S1473-3099(19)30546-8
Niller HH, Angstwurm K, Rubbenstroth D, Schlottau K, Ebinger A, Giese S, Wunderlich S, Banas B, Forth LF, Hoffmann D, Höper D, Schwemmle M, Tappe D....In 2018-19, Borna disease virus 1 (BoDV-1), the causative agent of Borna disease in horses, sheep, and other domestic mammals, was reported in five human patients with severe to fatal encephalitis in Germany. However, information on case frequencies, clinical courses, and detailed epidemiological analyses are still lacking. We report the occurrence of BoDV-1-associated encephalitis in cases submitted to the Institute of Clinical Microbiology and Hygiene, Regensburg University Hospital, Regensburg, Germany, and provide a detailed description of newly identified cases of BoDV-1-induced encephali...
Chronic progressive lymphoedema in Friesian horses: suggestive phenotype of affected horses and genome-wide association study.
Veterinary dermatology    January 6, 2020   Volume 31, Issue 3 234-e51 doi: 10.1111/vde.12831
Affolter VK, Dalley B, Kass PH, Brown EA, Sonder C, Bannasch DL.Chronic progressive lymphoedema (CPL) is a disabling condition affecting various draft horse breeds, including Friesian horses. Objective: The high incidence of CPL in Friesian horses suggests a genetic component and a predisposing phenotype. Methods: For the genomic study, 26 affected and 19 control horses were evaluated. Body measurements were taken from 28 affected and nine control Friesian horses. Methods: Axiom® Equine Genotyping Array with a total of 307,474 single nucleotide polymorphism (SNPs) was used for the case/control genome-wide association study (GWAS). Height, weight and leg m...
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