Analyze Diet

Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Temporal detection of equine herpesvirus infections of a cohort of mares and their foals.
Veterinary microbiology    June 13, 2006   Volume 116, Issue 4 249-257 doi: 10.1016/j.vetmic.2006.05.002
Bell SA, Balasuriya UB, Gardner IA, Barry PA, Wilson WD, Ferraro GL, MacLachlan NJ.The objectives of this study were to estimate the prevalence of equine herpesviruses (EHV) 1-5 in the nasal secretions (NS) of a cohort of 12 mares and their foals from birth to 6 months of age, estimate the prevalence of EHV-1-5 infection of peripheral blood mononuclear cells (PBMC) of selected foals, and investigate phylogenetic relationships amongst the various strains of EHV-2 and 5. Virus-specific PCR assays were used to detect EHV-1-5 in NS and PBMC. A homologous portion of the glycoprotein B (gB) gene of the various strains of EHV-2 and 5 was sequenced and compared. EHV-2, 4, and 5 were...
A comparative kinetic analysis of the reactivity of plant, horse, and human respiratory cytochrome c towards cytochrome c oxidase.
Biochemical and biophysical research communications    June 12, 2006   Volume 346, Issue 3 1108-1113 doi: 10.1016/j.bbrc.2006.06.022
Rodríguez-Roldán V, García-Heredia JM, Navarro JA, Hervás M, De la Cerda B, Molina-Heredia FP, De la Rosa MA.Two synthetic genes coding for human and Arabidopsis cytochrome c, respectively, have been designed and constructed, and the recombinant proteins have been over-expressed in Escherichia coli cells. Thus a comparative analysis of the two heme proteins, including horse cytochrome c as a reference, has been performed. In addition to their physico-chemical properties, the redox behavior of the three proteins has been analyzed by following the kinetics of both their reduction by flavin semiquinones (lumiflavin, riboflavin, and FMN) and oxidation by cytochrome c oxidase. The resulting data indicate ...
Extraction and detection of mRNA from horsehair.
The Journal of veterinary medical science    June 8, 2006   Volume 68, Issue 5 503-506 doi: 10.1292/jvms.68.503
Sato T, Sato G, Shoji Y, Itou T, Sakai T.After RNA extraction from horsehair shafts and roots, the mRNAs of beta-actin, muscle-type phosphofructokinase, and transforming growth factor-beta1 were detected by reverse transcription polymerase chain reaction assay. Low amounts of RNA were present in the horsehair. These specific mRNA transcripts were readily detected when more than three hair roots were used. However, detection of the mRNA transcripts was difficult in the hair shaft. These findings indicate that the small amounts of residual RNA in horsehair roots can be utilized as samples for molecular biological analysis.
Internally controlled real-time PCR method for quantitative species-specific detection and vapA genotyping of Rhodococcus equi.
Applied and environmental microbiology    June 6, 2006   Volume 72, Issue 6 4256-4263 doi: 10.1128/AEM.02706-05
Rodríguez-Lázaro D, Lewis DA, Ocampo-Sosa AA, Fogarty U, Makrai L, Navas J, Scortti M, Hernández M, Vázquez-Boland JA.We developed a novel quantitative real-time PCR (Q-PCR) method for the soil actinomycete Rhodococcus equi, an important horse pathogen and emerging human pathogen. Species-specific quantification was achieved by targeting the chromosomal monocopy gene choE, universally conserved in R. equi. The choE Q-PCR included an internal amplification control (IAC) for identification of false negatives. A second Q-PCR targeted the virulence plasmid gene vapA, carried by most horse isolates but infrequently found in isolates from other sources. The choE-IAC and vapA assays were 100% sensitive and specific ...
Genetic analyses of the radiographic appearance of the distal sesamoid bones in Hanoverian Warmblood horses.
American journal of veterinary research    June 3, 2006   Volume 67, Issue 6 1013-1019 doi: 10.2460/ajvr.67.6.1013
Stock KF, Distl O.To evaluate whether additive genetic correlations existed between certain aspects of the radiographic appearance of the distal sesamoid (navicular) bones (RNB) or between RNB and other types of radiographic changes in the limbs of Hanoverian Warmblood horses. Methods: 5,157 horses. Methods: Quasi-linear and binary traits were defined by the appearance of canales sesamoidales (CSs) and the structure and contour of the forelimb navicular bones (NBs). Prevalences of osseous fragments in the metacarphophalangeal and metatarsophalangeal (fetlock) and tarsocrural joints and deforming arthropathy in ...
Production of horse foals via direct injection of roscovitine-treated donor cells and activation by injection of sperm extract.
Reproduction (Cambridge, England)    June 1, 2006   Volume 131, Issue 6 1063-1072 doi: 10.1530/rep.1.01095
Hinrichs K, Choi YH, Love CC, Chung YG, Varner DD.We evaluated the effects of different donor cell treatments and activation methods on production of blastocysts after equine nuclear transfer. Nuclear transfer was performed by direct injection of donor cells, using a piezo drill, and standard activation was by injection of sperm factor followed by culture with 6-dimethylaminopurine. There was no difference in blastocyst development between embryos produced with roscovitine-treated or confluent donor cells (3.6% for either treatment). Addition of injection of roscovitine or culture with cycloheximide at the time of activation did not affect bl...
No borna disease virus-specific RNA detected in blood of race horses and jockeys.
Acta neuropsychiatrica    June 1, 2006   Volume 18, Issue 3-4 177-180 doi: 10.1111/j.1601-5215.2006.00118.x
Kim YK, Noh KB, Han CS, Moon JY, Yoon DK, Song KJ, Kim DJ, Kubera M, Maes M, Song JW.Borna disease virus (BDV) predominantly infects horses and sheep, causing a broad range of behavioural disorders. It is controversial whether BDV infects humans and causes psychiatric disorders. Objective: We searched for BDV-derived nucleic acids in blood of race horses and jockeys riding the horses. Methods: We assayed for the BDV genome in RNA extracted from peripheral blood mononuclear cells (PBMC) of 39 race horses and 48 jockeys. Two polymerase chain reaction protocols [one-tube reverse transcription-polymerase chain reaction (RT-PCR) and two-step RT-PCR] were used to assay BDV p24 and p...
Chromosomal assignments for the equine AMPK family genes.
Animal genetics    June 1, 2006   Volume 37, Issue 3 293-294 doi: 10.1111/j.1365-2052.2006.01431.x
Dranchak PK, Ekenstedt KJ, Valberg SJ, Chowdhary BP, Raudsepp T, Mickelson JR.No abstract available
Horse microsatellites and their amenability to comparative equid genetics.
Animal genetics    June 1, 2006   Volume 37, Issue 3 258-261 doi: 10.1111/j.1365-2052.2006.01422.x
Moodley Y, Baumgarten I, Harley EH.We investigated the applicability of microsatellite primers, designed in horses, for use in plains and mountain zebras. Fifteen of the 20 tested horse-isolated primer pairs reliably amplified polymorphic loci in two wild equid species. We used this information to assess whether levels of genetic variation and repeat size differed in species from which microsatellites were isolated and in closely related target species. Target equid species exhibited similar levels of genetic variation to the horse, the species from which primers were originally isolated. We show that ascertainment bias results...
Summer eczema in exported Icelandic horses: influence of environmental and genetic factors.
Acta veterinaria Scandinavica    May 26, 2006   Volume 48, Issue 1 3 doi: 10.1186/1751-0147-48-3
Björnsdóttir S, Sigvaldadóttir J, Broström H, Langvad B, Sigurdsson A.A cross sectional study was designed to estimate the prevalence of summer eczema (a chronic, recurrent seasonal dermatitis) in exported Icelandic horses and the influence of environmental and genetic factors on the development of the disease. Among 330 horses, which had been exported to Germany, Denmark and Sweden, 114 (34.5%) were found to have clinical signs of summer eczema. The prevalence was highest 2 years after export and the exposure to the biting midges Culicoides spp., was found to be the main risk factor for developing the disease. Genetic influence on the sensitivity for the diseas...
Human chorionic gonadotropin-dependent induction of an equine aldo-keto reductase (AKR1C23) with 20alpha-hydroxysteroid dehydrogenase activity during follicular luteinization in vivo.
Journal of molecular endocrinology    May 25, 2006   Volume 36, Issue 3 449-461 doi: 10.1677/jme.1.01987
Brown KA, Boerboom D, Bouchard N, Doré M, Lussier JG, Sirois J.Aldo-keto reductases (AKRs) are multifunctional enzymes capable of acting on a wide variety of substrates, including sex steroids. AKRs having 20alpha-hydroxysteroid dehydrogenase (20alpha-HSD) activity can reduce progesterone to 20alpha-hydroxy-4-pregnen-3-one (20alpha-DHP), a metabolite with lower affinity for the progesterone receptor. The objective of this study was to investigate the regulation of equine AKR1C23 during human chorionic gonadotropin (hCG)-induced ovulation/luteinization. The equine AKR1C23 cDNA was cloned and shown to encode a 322 amino acid protein that is conserved (71-81...
Comparative mapping of oculocutaneous albinism type II (OCA2), transient receptor potential cation channel, subfamily M member 1 (TRPM1) and two equine microsatellites, ASB08 and 1CA43, among four equid species by fluorescence in situ hybridization.
Cytogenetic and genome research    May 24, 2006   Volume 114, Issue 1 93A doi: 10.1159/000091935
Bellone R, Lear T, Adelson DL, Bailey E.No abstract available
Social relationships in a herd of Sorraia horses Part II. Factors affecting affiliative relationships and sexual behaviours.
Behavioural processes    May 19, 2006   Volume 73, Issue 3 231-239 doi: 10.1016/j.beproc.2006.05.005
Heitor F, do Mar Oom M, Vicente L.The influence of age, dominance rank, kinship and aggressiveness over affiliative relationships and sexual behaviours were analysed in a herd of Sorraia horses, Equus caballus, kept under extensive management. Subjects were 10 adult mares 5-18 years old that had known each other since birth, and a stallion introduced into the group for breeding for the first time. Kinship coefficient and dominance rank were the most important factors affecting affiliative relationships. Bonds were reciprocal and stronger among mares with higher kinship. Mares spent more time in proximity to close-ranking and l...
Pathogenesis of equine herpesvirus-associated neurological disease: a revised explanation.
Equine veterinary journal    May 19, 2006   Volume 38, Issue 3 283-287 doi: 10.2746/042516406776866462
Borchers K, Thein R, Sterner-Kock A.In recent years, outbreaks of equine herpesvirus-associated neurological disease (EAND) have been reported with increasing frequency and severity (Thein et al. 1993; McCartan et al. 1995; Friday et al. 2000; van Maanen et al. 2001; Stierstorfer et al. 2002; Cardwell et al. 2003; Studdert et al. 2003). Despite 40 years of worldwide research, EAND cannot be adequately prevented or fully explained. Improvement in diagnosis and detailed genetic characterisation of equine herpesvirus (EHV) strains prompted us to re-evaluate EHV-associated neurological diseases from epizootiological, pathol...
Myopathy in American miniature horses.
Equine veterinary journal    May 19, 2006   Volume 38, Issue 3 272-276 doi: 10.2746/042516406776866381
Myers CJ, Aleman M, Heidmann R, Wilson WD, Madigan JE.No abstract available
Genetic and permanent environmental variability of twinning in Thoroughbred horses estimated via three threshold models.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    May 19, 2006   Volume 123, Issue 3 186-190 doi: 10.1111/j.1439-0388.2006.00575.x
Wolc A, Bresińska A, Szwaczkowski T.Twinning is a serious problem in Thoroughbred horses, as most of the multiple pregnancies are miscarried and live foals present lower performance values. The aim of this study was to estimate the heritability and repeatability of twinning in Thoroughbred horses. A total of 12648 pregnancies of 2033 Thoroughbred mares born between 1929 and 1994 in 11 studs were included. The analysis was performed by the use of AI-REML algorithm under three threshold animal models. The first model included effects of stud, mare's birth period and interaction between them as fixed. The second model included the ...
Cholesterol-to-phospholipid ratio in whole sperm and seminal plasma from fertile stallions and stallions with unexplained subfertility.
Animal reproduction science    May 19, 2006   Volume 99, Issue 1-2 65-71 doi: 10.1016/j.anireprosci.2006.03.018
Brinsko SP, Love CC, Bauer JE, Macpherson ML, Varner DD.Semen samples were collected from six fertile stallions and seven stallions with unexplained infertility. Percentages of motile sperm (77.5 +/- 11.3 versus 67.5 +/- 12.2, P = 0.2), and progressively motile sperm (70.8 +/- 13.6 versus 60.7 +/- 14.0, P = 0.2) were similar between fertile and subfertile stallions, respectively. Morphologic characteristics in ejaculates of control and affected stallions (% normal: 60.2 +/- 18.2 versus 52.9 +/- 11.3, P = 0.4; % abnormal heads 7.3 +/- 4.8 versus 12.1 +/- 5.0, P = 0.11; and % abnormal acrosomes 1.6 +/- 2.1 versus 3.0 +/- 3.4, P = 0.4) did not differ....
Characterisation of lymphocyte subsets in the equine oviduct.
Equine veterinary journal    May 19, 2006   Volume 38, Issue 3 214-218 doi: 10.2746/042516406776866363
Brinsko SP, Ball BA.The equine oviduct is the site of fertilisation and location of embryonic development during the first 5 or 6 days. It therefore has an important influence on mare fertility. Although histopathological changes have been described previously, there is limited information regarding lymphocyte subtypes present in the mucosa of the normal equine oviduct. Objective: To characterise the distribution of CD3+, CD4+, CD8+ and B lymphocytes in the equine oviduct from inseminated mares during oestrus and dioestrus, and from noninseminated mares during the immediate post ovulatory period. Methods: Oviduct...
RT-PCR for detection of all seven genotypes of Lyssavirus genus.
Journal of virological methods    May 19, 2006   Volume 135, Issue 2 281-287 doi: 10.1016/j.jviromet.2006.03.008
Vázquez-Morón S, Avellón A, Echevarría JE.The Lyssavirus genus includes seven species or genotypes named 1-7. Rabies genotypes correlate with geographical distribution and specific hosts. Co-circulation of different lyssaviruses, imported cases, and the presence of unknown viruses, such as Aravan, Khujand, Irkut and West Caucasian Bat Virus, make it necessary to use generic methods able to detect all lyssaviruses. Primer sequences were chosen from conserved regions in all genotypes in order to optimise a generic RT-PCR. Serial dilutions of 12 RNA extracts from all seven Lyssavirus genotypes were examined to compare the sensitivity of ...
Evaluation of genetic and metabolic predispositions and nutritional risk factors for pasture-associated laminitis in ponies.
Journal of the American Veterinary Medical Association    May 9, 2006   Volume 228, Issue 10 1538-1545 doi: 10.2460/javma.228.10.1538
Treiber KH, Kronfeld DS, Hess TM, Byrd BM, Splan RK, Staniar WB.To evaluate genetic and metabolic predispositions and nutritional risk factors for development of pasture-associated laminitis in ponies. Methods: Observational cohort study. Methods: 160 ponies. Methods: A previous diagnosis of laminitis was used to differentiate 54 ponies (PL group) from 106 nonlaminitic ponies (NL group). Pedigree analysis was used to determine a mode of inheritance for ponies with a previous diagnosis of laminitis. In early March, ponies were weighed and scored for body condition and basal venous blood samples were obtained. Plasma was analyzed for glucose, insulin, trigly...
Ubiquitin expression in muscle from horses with polysaccharide storage myopathy.
Veterinary pathology    May 5, 2006   Volume 43, Issue 3 270-275 doi: 10.1354/vp.43-3-270
Valentine BA, Flint TH, Fischer KA.Serial sections of formalin-fixed, paraffin-embedded muscle biopsy specimens from 28 Quarter Horse, Paint, and draft-related breeds, aged 0.5-23 years, were treated with periodic acid-Schiff (PAS) stain for glycogen and were immunostained to detect ubiquitin expression. On the basis of findings in PAS-stained sections, a diagnosis of equine polysaccharide storage myopathy (EPSSM) was made in 22 horses aged 2-23 years (mean, 9.4 years); samples from 6 horses aged 0.5-15 years (mean, 7.3 years) had a normal PAS staining pattern, with no relevant lesions. Ubiquitin expression was detected in all ...
TNF-alpha SNP haplotype frequencies in equidae.
Tissue antigens    May 5, 2006   Volume 67, Issue 5 377-382 doi: 10.1111/j.1399-0039.2006.00581.x
Brown JJ, Ollier WE, Thomson W, Matthews JB, Carter SD, Binns M, Pinchbeck G, Clegg PD.Tumour necrosis factor alpha (TNF-alpha) is a pro-inflammatory cytokine that plays a crucial role in the regulation of inflammatory and immune responses. In all vertebrate species the genes encoding TNF-alpha are located within the major histocompatability complex. In the horse TNF-alpha has been ascribed a role in a variety of important disease processes. Previously two single nucleotide polymorphisms (SNPs) have been reported within the 5' un-translated region of the equine TNF-alpha gene. We have examined the equine TNF-alpha promoter region further for additional SNPs by analysing DNA from...
Selection of a set of reliable reference genes for quantitative real-time PCR in normal equine skin and in equine sarcoids.
BMC biotechnology    April 27, 2006   Volume 6 24 doi: 10.1186/1472-6750-6-24
Bogaert L, Van Poucke M, De Baere C, Peelman L, Gasthuys F, Martens A.Real-time quantitative PCR can be a very powerful and accurate technique to examine gene transcription patterns in different biological conditions. One of the critical steps in comparing transcription profiles is accurate normalisation. In most of the studies published on real-time PCR in horses, normalisation occurred against only one reference gene, usually GAPDH or ACTB, without validation of its expression stability. This might result in unreliable conclusions, because it has been demonstrated that the expression levels of so called "housekeeping genes" may vary considerably in different t...
Ivermectin resistance in Parascaris equorum.
The Veterinary record    April 25, 2006   Volume 158, Issue 16 572 doi: 10.1136/vr.158.16.572-b
Stoneham S, Coles G.No abstract available
Polysaccharide storage myopathy in a 4-year-old Holsteiner gelding.
The Veterinary clinics of North America. Equine practice    April 22, 2006   Volume 22, Issue 1 145-156 doi: 10.1016/j.cveq.2005.12.004
MacLeay JM.No abstract available
Proceedings of the Ninth International Symposium on Equine Reproduction, Kerkrade, The Netherlands, 6-11 August 2006. Abstracts.
Animal reproduction science    April 22, 2006   Volume 94, Issue 1-4 19-442 doi: 10.1016/j.anireprosci.2006.04.016
No abstract available
Type 1 renal tubular acidosis in a broodmare.
The Veterinary clinics of North America. Equine practice    April 22, 2006   Volume 22, Issue 1 229-237 doi: 10.1016/j.cveq.2005.12.011
Gull T.No abstract available
Congenital renal dysplasia in a 7-month-old quarter horse colt.
The Veterinary clinics of North America. Equine practice    April 22, 2006   Volume 22, Issue 1 e63-e69 doi: 10.1016/j.cveq.2005.12.026
Plummer PJ.No abstract available
Polydipsia and polyuria in a weanling colt caused by nephrogenic diabetes insipidus.
The Veterinary clinics of North America. Equine practice    April 22, 2006   Volume 22, Issue 1 219-227 doi: 10.1016/j.cveq.2005.12.010
Brashier M.No abstract available
Extended phylogeny of equine arteritis virus: division into new subgroups.
Journal of veterinary medicine. B, Infectious diseases and veterinary public health    April 22, 2006   Volume 53, Issue 2 55-58 doi: 10.1111/j.1439-0450.2006.00916.x
Mittelholzer C, Stadejek T, Johansson I, Baule C, Ciabatti I, Hannant D, Paton D, Autorino GL, Nowotny N, Belák S.To determine a conclusive phylogeny, equine arteritis viruses from Italy, Austria, Hungary, Sweden, South Africa and other parts of the world were analysed by reverse-transcription polymerase chain reaction amplification and direct sequencing. The nucleotide sequences corresponding to the variable part of the large glycoprotein GP5, specified by open reading frame 5, were compared and added to a previously published phylogenetic tree in which a clear division between 'European' and 'American' type viruses had been established. Adding the sequences determined in this study and new sequences ret...