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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
SRY negative 64,XX intersex phenotype in an American saddlebred horse.
Veterinary journal (London, England : 1997)    December 28, 2005   Volume 173, Issue 2 437-439 doi: 10.1016/j.tvjl.2005.11.008
Bannasch D, Rinaldo C, Millon L, Latson K, Spangler T, Hubberty S, Galuppo L, Lowenstine L.A female American saddlebred horse was presented for surgical correction of a possible pseudohermaphrodite condition. The horse had abnormal external genitalia and exhibited stallion-like behaviour. No evidence of uterine or ovarian tissue was identified on laparoscopic examination, but hypoplastic testicular-like tissue was removed, although this was found to contain no spermatogonia upon histopathological examination. A karyotype was performed and showed the normal chromosomal complement for a female horse (64,XX). Polymerase chain reaction to detect the SRY gene was negative in peripheral b...
Molecular variability in different Indian isolates of equine herpesvirus-1.
Veterinary research communications    December 22, 2005   Volume 29, Issue 8 721-734 doi: 10.1007/s11259-005-3380-z
Gupta AK, Kaur D, Rattan B, Yadav MP.Three abortigenic Indian isolates of equine herpesvirus-1 (EHV-1) (Tohana, Hisar and Bikaner), along with two exotic abortigenic isolates (AB4 and V592) and another EHV-1 isolate (Jind) obtained from a case of perinatal foal mortality, were studied for variability. For this purpose, PCR and restriction endonuclease (RE) digestion techniques were used simultaneously as a DNA fingerprinting system. Nine different regions of EHV-1 virus were amplified by PCR using primer pairs specific for the regions and the products obtained from these regions were subsequently subjected to various restriction ...
Class 1 integrons in Enterobacteriaceae isolated from clinical infections of horses and dogs in the Netherlands.
Microbial drug resistance (Larchmont, N.Y.)    December 20, 2005   Volume 11, Issue 4 383-386 doi: 10.1089/mdr.2005.11.383
Duijkeren EV, Box AT, Schellen P, Houwers DJ, Fluit AC.Integrons in gentamicin- and cotrimoxazole-resistant Enterobacteriaceae from dogs and horses with clinical infections were analyzed by conserved segment PCR-RFLP. Five distinct integron types were found, most of which have previously been reported in Enterobacteriaceae isolated from humans and farm animals, indicating that resistance genes are exchanged between the reservoirs in humans, farm animals, and companion animals.
Congenital stationary night blindness in a Thoroughbred and a Paso Fino.
Veterinary ophthalmology    December 20, 2005   Volume 8, Issue 6 415-419 doi: 10.1111/j.1463-5224.2005.00416.x
Nunnery C, Pickett JP, Zimmerman KL.This report documents congenital stationary night blindness (CSNB) in two non-Appaloosa horse breeds (Thoroughbred and Paso Fino). History of vision impairment since birth, normal ocular structures on ophthalmic examination, and electroretinographic findings were consistent with CSNB. In one horse (Thoroughbred), a 9-year follow-up was carried out. In the Paso Fino, severe vision impairment from birth to approximately 1 year of age in both dim and bright light situations led to humane euthanasia and histopathologic confirmation of the disorder.
Platelet dysfunction (Glanzmann’s thrombasthenia) in horses.
Journal of veterinary internal medicine    December 17, 2005   Volume 19, Issue 6 917-919 doi: 10.1892/0891-6640(2005)19[917:pdgtih]2.0.co;2
Livesey L, Christopherson P, Hammond A, Perkins J, Toivio-Kinnucan M, Insalaco T, Boudreaux MK.No abstract available
Spatial distribution of osteocyte lacunae in equine radii and third metacarpals: considerations for cellular communication, microdamage detection and metabolism.
Cells, tissues, organs    December 7, 2005   Volume 180, Issue 4 215-236 doi: 10.1159/000088938
Skedros JG, Grunander TR, Hamrick MW.Osteocytes, which are embedded in bone matrix, are the most abundant cells in bone. Despite the ideal location of osteocytes to sense the local environment and influence bone remodeling, their functions, and the relative importance of these functions, remain controversial. In this study, we tested several hypotheses that address the possibilities that population densities of osteocyte lacunae (Ot.Lc.N/B.Ar) correlate with strain-, remodeling- or metabolism-related aspects of the local biomechanical environments of mid-third diaphyseal equine radii and third metacarpals from skeletally mature a...
Analysis of the horse V(H) repertoire and comparison with the human IGHV germline genes, and sheep, cattle and pig V(H) sequences.
Molecular immunology    December 7, 2005   Volume 43, Issue 11 1836-1845 doi: 10.1016/j.molimm.2005.10.017
Almagro JC, Martinez L, Smith SL, Alagon A, Estevez J, Paniagua J.We have constructed a chimeric antibody single-chain Fv (scFv) fragments phage-displayed library that combines an invariant human V(L) chain with the repertoire of V(H) domains amplified from a horse immunized against scorpion venom. To gain insight into the equine V(H) repertoire, the V(H) sequences of 46 unique clones randomly chosen from the library prior to antigenic selection were analyzed. Comparisons with previously reported equine V(H) sequences, as well as with the repertoire of human IGHV germline genes and known V(H) sequences of sheep, cattle and pig, suggest that the equine IGH lo...
[Investigation of the prevalence of summer eczema in Icelandic horses in northern Germany].
Berliner und Munchener tierarztliche Wochenschrift    December 2, 2005   Volume 118, Issue 11-12 481-489 
Lange S, Hamann H, Deegen E, Ohnesorge B, Distl O.An epidemiological study on summer eczema (SE) was performed in 490 Icelandic horses from 24 stud farms located in Lower Saxony and Westphalia. The study revealed a prevalence of summer eczema of 29.8 %. Horses imported from Iceland were affected with a frequency of 71.9 %, whereas horses born in Germany and other countries had a prevalence of 15.6 % and 27.3 %. Mares (33.1 %) and geldings (29.1 %) were more often affected by summer eczema than stallions with 15.5 %. The most common sites of summer eczema were mane and tail. Five to eight years old horses were more severely affected by SE than...
Single linkage group per chromosome genetic linkage map for the horse, based on two three-generation, full-sibling, crossbred horse reference families.
Genomics    November 28, 2005   Volume 87, Issue 1 1-29 doi: 10.1016/j.ygeno.2005.09.001
Swinburne JE, Boursnell M, Hill G, Pettitt L, Allen T, Chowdhary B, Hasegawa T, Kurosawa M, Leeb T, Mashima S, Mickelson JR, Raudsepp T, Tozaki T....A genetic linkage map of the horse consisting of 742 markers, which comprises a single linkage group for each of the autosomes and the X chromosome, is presented. The map has been generated from two three-generation full-sibling reference families, sired by the same stallion, in which there are 61 individuals in the F2 generation. Each linkage group has been assigned to a chromosome and oriented with reference to markers mapped by fluorescence in situ hybridization. The average interval between markers is 3.7 cM and the linkage groups collectively span 2772 cM. The 742 markers comprise 734 mic...
Horses for courses. Comparative gastroenterology: common ground and collaborative potential.
BMJ (Clinical research ed.)    November 26, 2005   Volume 331, Issue 7527 1248-1251 doi: 10.1136/bmj.331.7527.1248
Hudson NP, Dunlop MG.No abstract available
Detection of equine herpesvirus type 1 by real time PCR.
Journal of virological methods    November 22, 2005   Volume 133, Issue 1 70-75 doi: 10.1016/j.jviromet.2005.10.024
Elia G, Decaro N, Martella V, Campolo M, Desario C, Lorusso E, Cirone F, Buonavoglia C.A real-time PCR assay was developed for detection and quantitation of equid herpesvirus type 1 (EHV-1). The sensitivity of the assay was compared with an established nested-PCR (n-PCR). The real-time PCR detected 1 copy of target DNA, with a sensitivity 1 log higher than gel-based n-PCR. The assay was able to detect specifically EHV-1 DNA in equine tissue samples and there was no cross-amplification of other horse herpesviruses. Real-time PCR was applied to determine EHV-1 load in tissue samples from equine aborted fetuses. The high sensitivity and reproducibility of the EHV-1-specific fluorog...
Changes in steady-state concentrations of messenger ribonucleic acids in luteal tissue during prostaglandin F2alpha induced luteolysis in mares.
Animal reproduction science    November 22, 2005   Volume 90, Issue 3-4 273-285 doi: 10.1016/j.anireprosci.2005.02.008
Beg MA, Gastal EL, Gastal MO, Ji S, Wiltbank MC, Ginther OJ.Transvaginal ultrasound-guided luteal biopsy was used to evaluate the effects of prostaglandin (PG)F2alpha on steady-state concentrations of mRNA for specific genes that may be involved in regression of the corpus luteum (CL). Eight days after ovulation (Hour 0), mares (n=8/group) were randomized into three groups: control (no treatment or biopsy), saline+biopsy (saline treatment at Hour 0 and luteal biopsy at Hour 12), or PGF2alpha+biopsy (5mg PGF2alpha at Hour 0 and luteal biopsy at Hour 12). The effects of biopsy on CL were compared between the controls (no biopsy) and saline+biopsy group. ...
Radiation hybrid mapping of equine CDK2, DGKA, DNAJC14, MMP19, CTSL and GAS1.
Animal genetics    November 19, 2005   Volume 36, Issue 6 536-537 doi: 10.1111/j.1365-2052.2005.01381.x
Wittwer C, Chowdhary BP, Distl O.No abstract available
Cytogenetic mapping of immunity-related genes in the domestic horse.
Animal genetics    November 19, 2005   Volume 36, Issue 6 507-510 doi: 10.1111/j.1365-2052.2005.01348.x
Musilova P, Kubickova S, Vychodilova-Krenkova L, Kralik P, Matiasovic J, Hubertova D, Rubes J, Horin P.Chromosomal locations of 19 horse immunity-related loci (CASP1, CD14, EIF5A, FCER1A, IFNG, IL12A, IL12B, IL12RB2, IL1A, IL23A, IL4, IL6, MMP7, MS4A2, MYD88, NOS2A, PTGS2, TFRC and TLR2) were determined by fluorescence in situ hybridization. For IFNG and PTGS2, this study is a confirmation of their previously reported position. In addition, microsatellite (HMBr1) was localized in the same region as IFNG. All genes were assigned to regions of conserved synteny and the data obtained in this study enhance the comparative human-horse map. Cytogenetic localization of IL6 to ECA4q14-q21.1 suggested a...
The B-cell CLL lymphoma 2 (BCL2) gene maps to equine chromosome 8q22.
Animal genetics    November 19, 2005   Volume 36, Issue 6 517-519 doi: 10.1111/j.1365-2052.2005.01359.x
Klukowska-Rötzler J, Bugno M, Slota E, Robinson NE, Piumi F, Guérin G, Dolf G, Gerber V.No abstract available
cDNA sequence of the horse (Equus caballus) LAMA3 gene and characterization of two intronic SNP markers.
DNA sequence : the journal of DNA sequencing and mapping    November 17, 2005   Volume 16, Issue 6 468-473 doi: 10.1080/10425170500287674
Milenkovic D, Mata X, Chadi S, Guérin G.Laminins are large heterotrimeric basement membrane glycoproteins composed of alpha, beta and gamma chains. The Laminin 5 isoform has an alpha3beta3gamma2 composition and is essential for the adhesion of basal keratinocytes to the underlying epithelial basement membrane where it is mainly located. Mutations in the genes coding for the 3 chains have been associated with a severe skin blistering disease, Herlitz's junctional epidermolysis bullosa (JEB), observed in different species as man, dog, cat and horse. In this study, we report the sequence of the 5.2 kb horse laminin alpha 3 cDNA (LAMA3)...
Recovery of Swedish Equine arteritis viruses from semen by cell culture isolation and RNA transfection.
Journal of virological methods    November 16, 2005   Volume 133, Issue 1 48-52 doi: 10.1016/j.jviromet.2005.10.017
Mittelholzer C, Johansson I, Olsson AK, Ronéus M, Klingeborn B, Belák S.Recovery of infectious Equine arteritis virus (EAV) from the semen of persistently infected Swedish stallions was attempted by classical cell culture isolation and by transfection of extracted total RNA. Whereas virus from semen samples stored for several months at -20 degrees C or from extended semen could only be recovered by transfection of extracted RNA, isolation in cell culture was achieved readily with fresh, unextended semen stored at -70 degrees C or directly used after sampling. In parallel, the viruses were examined in the variable region of the large glycoprotein GP5 by nested RT-P...
Exon skipping in the KIT gene causes a Sabino spotting pattern in horses.
Mammalian genome : official journal of the International Mammalian Genome Society    November 11, 2005   Volume 16, Issue 11 893-902 doi: 10.1007/s00335-005-2472-y
Brooks SA, Bailey E.Sabino (SB) is a white spotting pattern in the horse characterized by white patches on the face, lower legs, or belly, and interspersed white hairs on the midsection. Based on comparable phenotypes in humans and pigs, the KIT gene was investigated as the origin of the Sabino phenotype. In this article we report the genetic basis of one type of Sabino spotting pattern in horses that we call Sabino 1, with the alleles represented by the symbols SB1 and sb1. Transcripts of KIT were characterized by reverse transcriptase polymerase chain reaction (RT-PCR) and sequencing cDNA from horses with the g...
Genetic and environmental parameters for racing time at different distances in Brazilian Thoroughbreds.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    November 9, 2005   Volume 122, Issue 6 393-399 doi: 10.1111/j.1439-0388.2005.00551.x
Mota MD, Abrahão AR, Oliveira HN.The aim of the present study was to investigate genetic parameters for racing time in Thoroughbred horses racing at distances between 1000 and 1600 m subdivided into 100-m intervals. The data provided by TURFETOTAL Ltda comprised races that occurred in the Gávea and Cidade Jardim race tracks over a period of 11 years (1992-2002) and consisted of 32,145 races and 238,890 time records. The variance components necessary to obtain the heritability and repeatability estimates of the traits studied were estimated with the MTDFREML program, and animal age at race (3 years old or younger, 4, 5 and ol...
Genomic characterization of MHC class I genes of the horse.
Immunogenetics    November 8, 2005   Volume 57, Issue 10 763-774 doi: 10.1007/s00251-005-0034-9
Tallmadge RL, Lear TL, Antczak DF.The availability of a contig of bacterial artificial chromosome (BAC) clones spanning the equine major histocompatibility complex (MHC) made possible a detailed analysis of horse MHC class I genes. Prior to this study, only a single horse MHC class I gene had been sequenced at the genomic level. Although many ( approximately 60) MHC class I cDNA sequences had been determined and published, from this information, it was not possible to determine how many class I loci are expressed in horses or to assign individual sequences to allelic series. In this study, 15 MHC class I genes were identified ...
Inseminate components are modulating the chemotactic activity of uterine polymorphonuclear granulocytes (PMN) of mares.
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 308-310 
Görgens A, Leibold W, Klug E, Schuberth HJ, Martinsson G, Zerbe H.No abstract available
Cryopreservation of stallion semen collected from good and poor freezers using a directional freezing device (Harmony CryoCare–Multi Thermal Gradient 516).
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 291-294 
Zirkler H, Gerbes K, Klug E, Sieme H.No abstract available
Seminal plasma proteins and semen characteristics in relation with fertility in the stallion.
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 255-258 
Barrier-Battut I, Dacheux JL, Gatti JL, Rouviere P, Stanciu C, Dacheux F, Vidament M.No abstract available
Reproductive parameters of Mini-Shetland stallions in north Germany.
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 267-270 
Neves AP, Trein CR, Möller G, Mattos RC, Klug E.No abstract available
Equine seminal plasma proteins related with fertility.
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 305-308 
Jobim MI, Bustamante Filho IC, Trein C, Wald VB, Gregory RM, Mattos RC.No abstract available
Relations between low rates of in vitro fertilization and induction of sperm acrosome reactions by zona pellucida in the equine species.
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 270-271 
Mugnier S, Magistrini M, Sachet L, Lahuec C, Yvon JM, Meyers S, Goudet G.No abstract available
Immunocastration in stallions: effect on spermatogenesis and behaviour.
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 230-233 
Clement F, Vidament M, Daels P, van der Meer F, Larry JL, Colenbrander B, Turkstra J.No abstract available
Improvement of the freezability of sex-sorted stallion spermatozoa.
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 315-318 
Buss H, Clulow J, Sieme H, Maxwell WM, Morris LH, Sieg B, Struckmann C, Rath D.No abstract available
Improvement of stallion semen post-thaw motility with the association dimethyl formamide and methyl formamide as cryoprotectors.
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 286-288 
Carmo MT, Papa FO, Medeiros AS, Araujo GH, Alvarenga MA.No abstract available
Composition of fractionated stallion ejaculates.
Animal reproduction science    November 3, 2005   Volume 89, Issue 1-4 228-230 
Kareskoski AM, Reilas T, Sankari S, Andersson M, Katila T.No abstract available