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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Equine dinucleotide repeat loci COR021-COR040.
Animal genetics    August 12, 1999   Volume 30, Issue 3 235-237 doi: 10.1046/j.1365-2052.1999.00404-16.x
Murphie AM, Hopman TJ, Schug MD, Aquadro CF, Bowling AT, Murray JD, Caetano AR, Antczak DF.No abstract available
Physical mapping of ten equine dinucleotide repeat microsatellites.
Animal genetics    August 12, 1999   Volume 30, Issue 3 235 doi: 10.1046/j.1365-2052.1999.00404-15.x
Lear TL, Brandon R, Bell K.No abstract available
Distribution of the ERE-1 family in Perissodactyla.
Mammalian genome : official journal of the International Mammalian Genome Society    August 12, 1999   Volume 10, Issue 9 930-933 doi: 10.1007/s003359901117
Sakagami M, Hiromura K, Chemnick LG, Ryder OA.No abstract available
Equine dinucleotide repeat loci COR001-COR020.
Animal genetics    August 12, 1999   Volume 30, Issue 3 225-226 doi: 10.1046/j.1365-2052.1999.00404.x
Hopman TJ, Han EB, Story MR, Schug MD, Aquadro CF, Bowling AT, Murray JD, Caetano AR, Antczak DF.No abstract available
Equine herpesvirus 1 gene 12 can substitute for vmw65 in the growth of herpes simplex virus (HSV) type 1, allowing the generation of optimized cell lines for the propagation of HSV vectors with multiple immediate-early gene defects.
Journal of virology    August 10, 1999   Volume 73, Issue 9 7399-7409 doi: 10.1128/JVI.73.9.7399-7409.1999
Thomas SK, Lilley CE, Latchman DS, Coffin RS.Herpes simplex virus (HSV) has often been suggested for development as a vector, particularly for the nervous system. Considerable evidence has shown that for use of HSV as a vector, immediate-early (IE) gene expression must be minimized or abolished, otherwise such vectors are likely to be highly cytotoxic. Mutations of vmw65 which abolish IE promoter transactivating activity may also be included to reduce IE gene expression generally. However, when vmw65 mutations are combined with an IE gene deletion, such viruses are hard to propagate, even on cells which otherwise complement the IE gene d...
Nortestosterone: endogenous in urine of goats, sheep and mares?
The Analyst    August 6, 1999   Volume 123, Issue 12 2633-2636 doi: 10.1039/a804947e
Sterk S, Herbold H, Blokland M, van Rossum H, van Ginkel L, Stephany R.For a number of species it is known that nortestosterone, either the alpha- or beta-epimer, can be of endogenous origin. For goats and mares similar results have not yet been published. As a follow-up on the experiments with cattle, a large number of urine samples per animal were collected from pregnant goats, sheep and mares. These samples were analysed for the presence of alpha- and beta-nortestosterone and alpha-estradiol using GC-MS. The results show that in the goats and mares studied alpha-nortestosterone is present during pregnancy. In this study no alpha-nortestosterone could be demons...
Investigations on the stereoselective action of isoxsuprine on alpha- and beta-adrenoceptors in equine common digital artery.
Pharmacological research    August 6, 1999   Volume 40, Issue 2 177-182 doi: 10.1006/phrs.1999.0487
Belloli C, Badino P, Carcano R, Odore R, Arioli F, Caloni F, Re G.The affinity and functional effects of isoxsuprine enantiomers were investigated to determine the enantiospecificity of the beta-agonistic and alpha-blocking effects. Functional assays on isolated smooth muscle preparations from equine common digital artery were performed to determine the apparent affinity (pD(2)) and intrinsic activity (alpha(E)) of (-)erythro-isoxsuprine (alphaS, betaR, gammaR) and (+)erythro-isoxsuprine (alphaR, betaS, gammaS). The affinity of two enantiomers for the different adrenoceptor types was studied by radioligand binding assays on membrane preparations from the sam...
Molecular detection of Babesia equi and Babesia caballi in horse blood by PCR amplification of part of the 16S rRNA gene.
Veterinary parasitology    August 6, 1999   Volume 84, Issue 1-2 75-83 doi: 10.1016/s0304-4017(99)00049-7
Bashiruddin JB, Cammà C, Rebêlo E.Babesia equi and Babesia caballi are tick-borne haemoparasites that may cause babesiosis of Equidae. In southern Europe B. equi is enzootic and infections may occur asymptomatically and more frequently than those due to B. caballi. Complement fixation test (CFT) is the official serological test for the diagnosis of equine babesiosis, but it has low sensitivity during early and latent stages of the disease. With the aim of developing more sensitive and rapid direct diagnostic alternatives, PCR systems that amplified DNA targets of 664 or 659 bp regions of the 16S rRNA genes were designed and de...
Ultrastructural aspects of feeding and secretion-excretion by the equine parasite Strongylus vulgaris.
Journal of helminthology    August 4, 1999   Volume 73, Issue 2 147-155 
Mobarak MS, Ryan MF.Light, scanning, and transmission electron microscopy were employed to provide further data on the putative origins of the immunogenic secretory-excretory product (ESP) of Strongylus vulgaris (Looss 1900). The sharply delineated but superficial attachment to the equine caecum by the mouth leaves behind an oval area devoid of epithelial cells. Attachment does not extend deeply enough to reach the muscularis mucosa layer of the equine intestine. The progressive digestion of the ingested plug of tissue (epithelial cells, blood cells and mucous) was visualized. The coelomocytes, floating cells and...
Major histocompatibility complex variation in the endangered Przewalski’s horse.
Genetics    August 3, 1999   Volume 152, Issue 4 1701-1710 doi: 10.1093/genetics/152.4.1701
Hedrick PW, Parker KM, Miller EL, Miller PS.The major histocompatibility complex (MHC) is a fundamental part of the vertebrate immune system, and the high variability in many MHC genes is thought to play an essential role in recognition of parasites. The Przewalski's horse is extinct in the wild and all the living individuals descend from 13 founders, most of whom were captured around the turn of the century. One of the primary genetic concerns in endangered species is whether they have ample adaptive variation to respond to novel selective factors. In examining 14 Przewalski's horses that are broadly representative of the living animal...
Identification of Ruminococcus flavefaciens as the predominant cellulolytic bacterial species of the equine cecum.
Applied and environmental microbiology    July 31, 1999   Volume 65, Issue 8 3738-3741 doi: 10.1128/AEM.65.8.3738-3741.1999
Julliand V, de Vaux A, Millet L, Fonty G.Detection and quantification of cellulolytic bacteria with oligonucleotide probes showed that Ruminococcus flavefaciens was the predominant species in the pony and donkey cecum. Fibrobacter succinogenes and Ruminococcus albus were present at low levels. Four isolates, morphologically resembling R. flavefaciens, differed from ruminal strains by their carbohydrate utilization and their end products of cellobiose fermentation.
[HPLC separation and characterization of tick-borne encephalitis and equine Venezuela encephalomyelitis viral proteins].
Bioorganicheskaia khimiia    July 28, 1999   Volume 25, Issue 4 253-256 
Akimenko ZA, Ofitserov VI, Shaprov VV, Iastrebov SI.Homogeneous (according to PAGE) capsid and surface viral proteins were isolated from concentrated purified suspensions of tick-borne encephalitis and Venezuelan equine encephalomyelitis viruses by one-stage reversed-phase HPLC. The amino acid composition and the sequences of their N-terminal parts were determined.
[Associations between the coat color and the blood-group system D antigens in horses].
Genetika    July 27, 1999   Volume 35, Issue 4 499-503 
Kniazev SP, Nikitin SV.The study of the association between the coat-color variants and the blood-group system D antigens in the populations of two related trotter breeds (Orlov Trotter and Russian Trotter) showed the presence of three associations between these characters in the Orlov Trotter breed. In the populations of Russian trotters, these associations were not detected. Possible reasons for the formation and maintenance of these associations and the role of the selection for coat color in the differentiation of breeds by the frequencies of some system D antigens are discussed.
A PCR based method for the identification of equine influenza virus from clinical samples.
Veterinary microbiology    July 27, 1999   Volume 67, Issue 3 161-174 doi: 10.1016/s0378-1135(99)00041-3
Oxburgh L, Hagström A.In this paper we describe the development of a nested RT-PCR assay for the rapid diagnosis and characterisation of influenza virus directly from clinical specimens. Viral RNA is extracted from nasal swabs by the guanidine thiocyanate extraction method, and subsequently reverse transcribed. The complementary DNA is then used as template in a nested PCR reaction. Primers designed for use in this assay are specific for three templates; (1) the nucleoprotein (NP) gene, (2) the haemagglutinin gene of the H7N7 equine influenza virus (A1), and (3) the haemagglutinin gene of the H3N8 equine influenza ...
A plasma membrane-associated hyaluronidase is localized to the posterior acrosomal region of stallion sperm and is associated with spermatozoal function.
Biology of reproduction    July 20, 1999   Volume 61, Issue 2 444-451 doi: 10.1095/biolreprod61.2.444
Meyers SA, Rosenberger AE.Sperm hyaluronidase has been implicated in sperm penetration of the extracellular matrix of the cumulus oophorus and may play a crucial role in gamete interaction and fertility in mammals. The objectives of this study were to characterize the enzyme activity of equine sperm hyaluronidase and to investigate its cellular distribution. Zymography of stallion sperm plasma membrane extracts was used to identify hyaluronidase activity in protein bands. Affinity-purified polyclonal IgG raised against equine sperm hyaluronidase was used to label fresh and capacitated stallion sperm, followed by indire...
Effects of fetuin on zona pellucida hardening and fertilizability of equine oocytes matured in vitro.
Biology of reproduction    July 20, 1999   Volume 61, Issue 2 533-540 doi: 10.1095/biolreprod61.2.533
Dell'Aquila ME, De Felici M, Massari S, Maritato F, Minoia P.In vitro fertilization (IVF) has had poor success in the horse, a situation related to low rates of sperm penetration through the zona pellucida (ZP). Zona pellucida hardening (ZPH) is seen in mouse and rat oocytes cultured in serum-free medium. The hardened ZP is refractory to sperm penetration. Fetuin, a component of fetal calf serum, inhibits ZPH and allows normal fertilization rates in oocytes cultured in the absence of serum. We evaluated whether fetuin is present in horse serum and follicular fluid (FF) and whether fetuin could inhibit ZPH in equine oocytes matured in vitro, thus increas...
Equine arteritis virus derived from an infectious cDNA clone is attenuated and genetically stable in infected stallions.
Virology    July 16, 1999   Volume 260, Issue 1 201-208 doi: 10.1006/viro.1999.9817
Balasuriya UB, Snijder EJ, van Dinten LC, Heidner HW, Wilson WD, Hedges JF, Hullinger PJ, MacLachlan NJ.Virus derived from an infectious cDNA clone of equine arteritis virus (EAV030H) was intranasally inoculated into two stallions, neither of which subsequently developed clinical manifestations of equine viral arteritis (EVA). Virus was isolated from nasal swabs and mononuclear cells collected from both stallions
Expression of endothelin in equine laminitis.
Equine veterinary journal    July 13, 1999   Volume 31, Issue 3 243-247 doi: 10.1111/j.2042-3306.1999.tb03180.x
Katwa LC, Johnson PJ, Ganjam VK, Kreeger JM, Messer NT.Biosynthesis of endothelin-1 (ET-1), the most potent endogenous vasoconstrictor yet identified, is increased following myocardial infarction (MI) in man. Pathological events which occur in the connective tissues of the equine hoof during laminitis are similar in some respects, to changes occurring in the myocardial connective tissues following MI in man. The objective of this study was to determine whether ET-1 expression in connective tissues obtained from the hoof of laminitic horses is increased compared with tissues obtained from healthy horses. Expression of ET-1 in connective tissues of ...
Phylogenetic relationships of Cheju horses to other horse breeds as determined by mtDNA D-loop sequence polymorphism.
Animal genetics    June 22, 1999   Volume 30, Issue 2 102-108 doi: 10.1046/j.1365-2052.1999.00419.x
Kim KI, Yang YH, Lee SS, Park C, Ma R, Bouzat JL, Lewin HA.Historical records suggest that horses inhabiting the island of Cheju in Korea are descendants of Mongolian horses introduced in 1276. Other studies, however, suggest that horses may have been present on the island prior to the Mongolian introduction. To determine the origin of the Cheju horses we used a phylogenetic analysis of sequences of the mitochondrial DNA (mtDNA) D-loop region, including tRNA Pro and parts of tRNA thr and tRNA Phe sequences (1102-bp excluding the tandem repeat region). Maximum parsimony and neighbor-joining trees were constructed using sequences determined for seven Ch...
Phylogenetic characterization of a highly attenuated strain of equine arteritis virus from the semen of a persistently infected standardbred stallion.
Archives of virology    June 12, 1999   Volume 144, Issue 4 817-827 doi: 10.1007/s007050050547
Patton JF, Balasuriya UB, Hedges JF, Schweidler TM, Hullinger PJ, MacLachlan NJ.An avirulent, novel variant of equine arteritis virus (EAV; CA95G) was isolated from the semen of a persistently infected Standardbred stallion. The CA95G virus caused subclinical infection and seroconversion in susceptible horses, and virus was isolated only once from blood and nasal secretions collected from 6 experimentally infected horses. Sequence analysis of genes encoding the known EAV structural proteins shows that this highly attenuated strain of EAV is genetically similar to virulent field strains of EAV and, in particular, to a strain of EAV that was isolated during an outbreak of e...
Detection of equine antibodies to babesia caballi by recombinant B. caballi rhoptry-associated protein 1 in a competitive-inhibition enzyme-linked immunosorbent assay.
Journal of clinical microbiology    June 12, 1999   Volume 37, Issue 7 2285-2290 doi: 10.1128/JCM.37.7.2285-2290.1999
Kappmeyer LS, Perryman LE, Hines SA, Baszler TV, Katz JB, Hennager SG, Knowles DP.A competitive-inhibition enzyme-linked immunosorbent assay (cELISA) was developed for detection of equine antibodies specific for Babesia caballi. The assay used recombinant B. caballi rhoptry-associated protein 1 (RAP-1) and monoclonal antibody (MAb) 79/17.18.5, which is reactive with a peptide epitope of a native 60-kDa B. caballi antigen. The gene encoding the recombinant antigen was sequenced, and database analysis revealed that the gene product is a rhoptry-associated protein. Cloning and expression of a truncated copy of the gene demonstrated that MAb 79/17.18.5 reacts with the C-termina...
Geographic distribution of Venezuelan equine encephalitis virus subtype IE genotypes in Central America and Mexico.
The American journal of tropical medicine and hygiene    May 29, 1999   Volume 60, Issue 4 630-634 doi: 10.4269/ajtmh.1999.60.630
Oberste MS, Schmura SM, Weaver SC, Smith JF.Phylogenetic analysis of 20 strains of Venezuelan equine encephalitis (VEE) virus subtype IE isolated from 1961 to 1996 in Mexico and throughout Central America showed that VEE virus subtype IE was monophyletic with respect to other VEE virus subtypes. Nonetheless, there were at least three distinct geographically separated VEE virus IE genotypes: northwestern Panama, Pacific coast (Mexico/Guatemala), and Gulf/Caribbean coast (Mexico/Belize). Strains from the Caribbean coast of Guatemala, Honduras, and Nicaragua may cluster with the Gulf/Caribbean genotype, but additional isolates from the reg...
Hepatocyte growth factor induces rat ovarian surface epithelial cell mitosis or apoptosis depending on the presence or absence of an extracellular matrix.
Endocrinology    May 26, 1999   Volume 140, Issue 6 2908-2916 doi: 10.1210/endo.140.6.6773
Hess S, Gulati R, Peluso JJ.The present studies showed that sequential treatment with equine CG (eCG) and hCG not only induced an increase in ovarian weight, but also caused an estimated 4.6-fold increase in the number of ovarian surface epithelial cells. In addition, eCG-hCG treatment increased ovarian hepatocyte growth factor (HGF) messenger RNA levels. These studies also demonstrated that rat primary ovarian surface epithelial cells as well as a cell line derived from rat ovarian surface epithelium (i.e. ROSE-179 cells) do not express the LH (hCG) receptor. Both of these cells express c-Met, the receptor for HGF. To a...
Cloning, sequencing and functional expression of zebra (Equus burchelli) LH.
Journal of reproduction and fertility    May 26, 1999   Volume 115, Issue 1 159-166 doi: 10.1530/jrf.0.1150159
Chopineau M, Martinat N, Pourchet C, Stewart F, Combarnous Y, Guillou F.Although donkey luteinizing hormone exhibits a very high degree of amino acid sequence identity with horse LH, its FSH activity in non-equine species is tenfold lower. The coding regions of the common zebra (Equus burchelli) glycoprotein hormone alpha-subunit and LH beta-subunit transcripts were cloned by reverse transcription-PCR from pituitary gland RNA to investigate more precisely the structure-function relationships of this gonadotrophin family. Zebra LH was then expressed in COS-7 cells and its LH and FSH activities were assessed in a rat Leydig cell bioassay (for LH) and in a cell line ...
Molecular characterization of equine isolates of Streptococcus pneumoniae: natural disruption of genes encoding the virulence factors pneumolysin and autolysin.
Infection and immunity    May 25, 1999   Volume 67, Issue 6 2776-2782 doi: 10.1128/IAI.67.6.2776-2782.1999
Whatmore AM, King SJ, Doherty NC, Sturgeon D, Chanter N, Dowson CG.Although often considered a strict human pathogen, Streptococcus pneumoniae has been reported to infect and cause pneumonia in horses, although the pathology appears restricted compared to that of human infections. Here we report on the molecular characterization of a group of S. pneumoniae isolates obtained from horses in England and Ireland. Despite being obtained from geographically distinct locations, the isolates were found to represent a tight clonal group, virtually identical to each other but genetically distinguishable from more than 120 divergent isolates of human S. pneumoniae. A co...
Detection of a common genotype among strains of Taylorella equigenitalis isolated from thoroughbred horses in Japan between 1994 and 1996.
Journal of basic microbiology    May 21, 1999   Volume 39, Issue 2 127-130 doi: 10.1002/(sici)1521-4028(199905)39:23.0.co;2-q
Matsuda M, Miyazawa T, Anzai T.We examined whether or not the genotype J could be detected among 21 new strains of T. equigenitalis isolated between 1994 and 1996 in Japan since our previous report (MIYAZAWA et al. 1995). The respective pulsed-field gel electrophoretic profiles of the 21 Japanese strains, as well as those of an old EQ59 used as a reference strain after separate digestion with the two restriction enzymes, ApaI and NotI, were essentially identical but differed from those of T. equigenitalis NCTC11184T and KENTUCKY 188, respectively. Hence, the 21 strains and EQ59 appeared to have a common genotype J. Conseque...
The cDNA sequences of equine antioxidative enzyme genes Cu/Zn-SOD and Mn-SOD, and these expressions in equine tissues.
The Journal of veterinary medical science    May 20, 1999   Volume 61, Issue 3 291-294 doi: 10.1292/jvms.61.291
Ishida N, Katayama Y, Sato F, Hasegawa T, Mukoyama H.The entire cDNA sequences were determined by reverse transcription-polymerase chain reaction (RT-PCR) and rapid amplification of cDNA ends (RACE) techniques for equine copper/zinc superoxide dismutase (Cu/Zn-SOD) and manganese superoxide dismutase (Mn-SOD) through the use of total RNA extracted from the testis of an adult Thoroughbred. The results revealed a protein coding region for equine Cu/Zn-SOD with bases totaling 465 bp, accompanied by an estimated 154 residues of amino acids. As for equine Mn-SOD, its coding region contained a total of 669 bp and an estimated 222 residues of amino acid...
Characterisation of equine T helper cells: demonstration of Th1- and Th2-like cells in long-term equine T-cell cultures.
Research in veterinary science    May 20, 1999   Volume 66, Issue 3 277-279 doi: 10.1053/rvsc.1998.0256
Aggarwal N, Holmes MA.The aim of this study was to characterise CD4+T-cells in equines, as these cells are pivotal in establishing immune responses or regulating established ones. Peripheral blood mononuclear cells from a pony immunised with ovalbumin were cultured in vitro in the presence of the specific antigen and autologous antigen presenting cells. During the antigen starvation phase, cells were maintained on recombinant equine IL-2. After 35 days of culture, most of the cells were CD4+, CD8-and sIg-. Cells proliferated specifically in the presence of antigen, as tested on day 42 of culture. These cells were a...
Identification and initial characterization of calcyclin and phospholipase A2 in equine conceptuses.
Molecular reproduction and development    May 20, 1999   Volume 53, Issue 2 179-187 doi: 10.1002/(SICI)1098-2795(199906)53:2<179::AID-MRD7>3.0.CO;2-P
Simpson KS, Adams MH, Behrendt-Adam CY, Baker CB, McDowell KJ.For development to proceed normally, the appropriate genes must be expressed in the correct tissues and in the correct time frame. Knowledge of gene expression during development provides information about the changes taking place within the conceptus as well as possible reasons for pregnancy failure. However, little is known about gene expression during development in the equine conceptus. In this study, we examined differences in gene expression between day 12 and day 15 equine conceptuses by suppression subtractive hybridization. This technique was used to isolate transcripts that are more ...
Equine nasal and paranasal tumours.
Veterinary journal (London, England : 1997)    May 18, 1999   Volume 157, Issue 3 220-221 doi: 10.1053/tvjl.1998.0345
Baker GJ.No abstract available