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Topic:Molecular biology

Molecular biology in horses involves the study of molecular processes and genetic mechanisms that underpin equine physiology and health. This field encompasses the analysis of DNA, RNA, proteins, and other biomolecules to understand gene expression, genetic variation, and cellular functions in horses. Techniques such as genomic sequencing, gene expression profiling, and molecular diagnostics are employed to explore topics like hereditary diseases, performance traits, and immune responses in equines. This page assembles peer-reviewed research studies and scholarly articles that investigate the molecular biology of horses, focusing on genetic research, molecular techniques, and their applications in equine science.
Identification of Rhodococcus equi using the polymerase chain reaction.
Letters in applied microbiology    August 1, 1996   Volume 23, Issue 2 72-74 doi: 10.1111/j.1472-765x.1996.tb00033.x
Bell KS, Philp JC, Christofi N, Aw DW.Two regions in the gene coding for 16S rRNA in Rhodococcus equi were selected as species-specific primer sequences for the polymerase chain reaction (PCR). PCR using these primers was tested against 10 strains of R. equi (including the type strain) and gave positive results for all but was negative for all other tested species of Rhodococcus; representatives of the most closely related genera and a number of other bacterial species. This method could therefore be used to identify this species which can infect the lungs or other organs of horses, pigs, humans and other animals.
Surface plasmon resonance studies of complex formation between cytochrome c and bovine cytochrome c oxidase incorporated into a supported planar lipid bilayer. II. Binding of cytochrome c to oxidase-containing cardiolipin/phosphatidylcholine membranes.
Biophysical journal    August 1, 1996   Volume 71, Issue 2 858-867 doi: 10.1016/S0006-3495(96)79287-1
Salamon Z, Tollin G.Complex formation between horse heart cytochrome c (cyt c) and bovine cytochrome c oxidase (cco) incorporated into a supported planar egg phosphatidylcholine membrane containing varying amounts of cardiolipin (CL) (0-20 mol%) has been studied under low (10 mM) and medium (160 mM) ionic strength conditions by surface plasmon resonance (SPR) spectroscopy. Both specific and nonspecific modes of cyt c binding are observed. The dissociation constant of the specific interaction between cyt c and cco increases from approximately 6.5 microM at low ionic strength to 18 microM at medium ionic strength, ...
Equine rhinovirus serotypes 1 and 2: relationship to each other and to aphthoviruses and cardioviruses.
The Journal of general virology    August 1, 1996   Volume 77 ( Pt 8) 1719-1730 doi: 10.1099/0022-1317-77-8-1719
Wutz G, Auer H, Nowotny N, Grosse B, Skern T, Kuechler E.Equine rhinoviruses (ERVs) are picornaviruses which cause a mild respiratory infection in horses. The illness resembles the common cold brought about by rhinoviruses in humans; however, the presence of a viraemia during ERV-1 infection, the occurrence of persistent infections and the physical properties are all more reminiscent of foot-and-mouth disease virus (FMDV). cDNA cloning and sequencing of the genomes of ERV-1 and ERV-2 between the poly(C) and poly(A) tracts showed that the serotypes are heterogeneous. Nevertheless, the genomic architecture of both serotypes is most similar to that of ...
Structure of equine infectious anemia virus proteinase complexed with an inhibitor.
Protein science : a publication of the Protein Society    August 1, 1996   Volume 5, Issue 8 1453-1465 doi: 10.1002/pro.5560050802
Gustchina A, Kervinen J, Powell DJ, Zdanov A, Kay J, Wlodawer A.Equine infectious anemia virus (EIAV), the causative agent of infectious anemia in horses, is a member of the lentiviral family. The virus-encoded proteinase (PR) processes viral polyproteins into functional molecules during replication and it also cleaves viral nucleocapsid protein during infection. The X-ray structure of a complex of the 154G mutant of EIAV PR with the inhibitor HBY-793 was solved at 1.8 A resolution and refined to a crystallographic R-factor of 0.136. The molecule is a dimer in which the monomers are related by a crystallographic twofold axis. Although both the enzyme and t...
Multiple gene expression in baculovirus system. Third generation vaccines for bluetongue disease and African horsesickness disease.
Annals of the New York Academy of Sciences    July 23, 1996   Volume 791 318-332 doi: 10.1111/j.1749-6632.1996.tb53539.x
Roy P.No abstract available
Cloning of a polymorphic sequence from the nontranscribed spacer of horse rDNA.
Mammalian genome : official journal of the International Mammalian Genome Society    July 1, 1996   Volume 7, Issue 7 539-541 doi: 10.1007/s003359900159
No abstract available
Characterisation of proteins in the seminal plasma of stallions, geldings and supplemented with testosterone.
Research in veterinary science    July 1, 1996   Volume 61, Issue 1 33-37 doi: 10.1016/s0034-5288(96)90107-1
McDowell KJ, Little TV, Timoney PJ, Adams MH.The major proteins in stallion seminal plasma were characterised by two-dimensional polyacrylamide gel electrophoresis, and compared with the patterns of proteins in normal geldings (castrated males) and geldings supplemented with testosterone. The major proteins or groups of proteins identified according to their approximate relative molecular weight in kilodaltons (kDa) and apparent isoelectric point (pl) were: 1) 60 kDa. pl 7; 2) 23 kDa, pl 4-5; 3) 25-30 kDa, pl 5.5-6; 4) 23 kDa, pl 7-8; and 5) 15-20 kDa, pl 6-7.5. Protein groups 1 and 2 were more prominent in the seminal plasma from the st...
Analysis of MHC class I expression in equine trophoblast cells using in situ hybridization.
Placenta    July 1, 1996   Volume 17, Issue 5-6 351-359 doi: 10.1016/s0143-4004(96)90060-0
Maher JK, Tresnan DB, Deacon S, Hannah L, Antczak DF.Down-regulation of major histocompatibility complex (MHC) genes by trophoblast cells is considered to be a primary mechanism preventing maternal immune rejection of the fetal-placental unit in mammalian pregnancy by rendering these cells, which form the primary barrier between mother and fetus, relatively non-antigenic. In situ hybridization with probes encoding human and horse MHC class I genes was used to characterize the pattern of MHC class I mRNA expression in the various forms of horse trophoblast. Strong hybridization signals were observed in the invasive trophoblast cells of chorionic ...
Comparison of the deduced matrix and fusion protein sequences of equine morbillivirus with cognate genes of the Paramyxoviridae.
Virus research    July 1, 1996   Volume 43, Issue 1 17-31 doi: 10.1016/0168-1702(96)01308-1
Gould AR.The nucleotide sequence of the matrix protein of equine morbillivirus (EMV) was determined to be 1062 nucleotides and coded for a deduced protein of M(r) 40148 having a net charge of + 19 at neutral pH. The matrix protein gene was separated from the P and F genes by intercistronic regions of 546 and 469 nucleotides, respectively. The nucleotide sequence which coded for the F protein was 1641 nucleotides and coded for a deduced protein of 546 amino acids having an M(r) of 60,447 and a charge + 4 at neutral pH. Partial sequence information was also determined for the P/V proteins. M, P and F pro...
Glycosylated equine prolactin and its carbohydrate moiety.
Journal of protein chemistry    July 1, 1996   Volume 15, Issue 5 413-426 doi: 10.1007/BF01886848
Butnev VY, Gotschall RR, Baker VL, Moore WT, Gout PW, Bousfield GR.Glycosylated equine prolactin (G-ePRL) and nonglycosylated ePRL were purified to homogeneity from side fractions obtained during isolation of LH/FSH from horse pituitaries. Both PRL forms were isolated together in high yield by the isolation procedure used for glycosylated porcine PRL/(G-pPRL) and pPRL, involving acetone extraction/precipitation, NaCl and isoelectric precipitation, and gel filtration. Purification of G-ePRL required additional Con A chromatography. The N-terminal amino acid sequencing for 32 cycles of G-ePRL and ePRL resulted in sequences identical to the known primary structu...
Ionic mechanisms of Ca(2+)-dependent electrolyte transport across equine sweat gland epithelium.
The Journal of physiology    June 15, 1996   Volume 493 ( Pt 3), Issue Pt 3 885-894 doi: 10.1113/jphysiol.1996.sp021431
Ko WH, Chan HC, Chew SB, Wong PY.1. The ionic mechanism involved in Ca(2+)-stimulated electrolyte transport in cultured equine sweat gland epithelial cells was studied using the short-circuit current (ISC) technique. 2. Microscopy revealed that the cultured cells grown on Millipore filters formed polarized monolayers with tight junctions. Monolayers exhibited a mean transepithelial resistance of 333.9 +/- 40.4 omega cm2. 3. Ca(2+)-mobilizing agents, A23187 (1 microM) or thapsigargin (0.01-1 microM), stimulated ISC while forskolin exerted little effect on the ISC. 4. Replacement of external Cl- by gluconate significantly reduc...
Influence of glycerol on the structure and stability of ferric horse heart myoglobin: a SAXS and circular dichroism study.
Biochimica et biophysica acta    June 7, 1996   Volume 1295, Issue 1 51-58 doi: 10.1016/0167-4838(96)00010-6
Barteri M, Gaudiano MC, Santucci R.The influence of glycerol on the structural properties of Fe(III)-horse heart myoglobin has been investigated by absorbance, CD and SR-SAXS spectroscopy. The results obtained indicate that both the tertiary and the secondary (alpha-helix) conformations of the protein are influenced by glycerol; in particular, an increase of approx. 8% in helical content was observed. Further, analysis of both the acid- and guanidine-induced denaturation transitions points to a glycerol-induced decreased stability of the tertiary structure; conversely, the alpha-helix conformation is found to be stabilized by t...
Looking for residues involved in the muscle acylphosphatase catalytic mechanism and structural stabilization: role of Asn41, Thr42, and Thr46.
Biochemistry    June 4, 1996   Volume 35, Issue 22 7077-7083 doi: 10.1021/bi952900b
Taddei N, Stefani M, Magherini F, Chiti F, Modesti A, Raugei G, Ramponi G.Asn41, Thr42, and Thr46 are invariant residues in both muscle and erythrocyte acylphosphatases isolated so far. Horse muscle acylphosphatase solution structure suggests their close spatial relationship to Arg23, the main substrate binding site. The catalytic and structural role of such residues, as well as their influence on muscle acylphosphatase stability, was investigated by preparing several gene mutants (Thr42Ala, Thr46Ala, Asn41Ala, Asn41Ser, and Asn41Gln) by oligonucleotide-directed mutagenesis. The mutated genes were cloned and expressed in Escherichia coli, and the mutant enzymes were...
Equine dinucleotide repeat loci LEX015-LEX024.
Animal genetics    June 1, 1996   Volume 27, Issue 3 217-218 
Coogle L, Reid R, Bailey E.No abstract available
Three new polymorphic equine microsatellites: HLM2, HLM3, HLM5.
Animal genetics    June 1, 1996   Volume 27, Issue 3 215 doi: 10.1111/j.1365-2052.1996.tb00961.x
Vega-Pla JL, Garrido JJ, Dorado G, de Andrés-Cara DF.No abstract available
Nested polymerase chain reaction for detection of Ehrlichia equi genomic DNA in horses and ticks (Ixodes pacificus).
Veterinary parasitology    June 1, 1996   Volume 63, Issue 3-4 319-329 doi: 10.1016/0304-4017(95)00904-3
Barlough JE, Madigan JE, DeRock E, Bigornia L.A nested polymerase chain reaction for detecting Ehrlichia equi in horses and ticks (Ixodes pacificus) was developed. A major second-round PCR product of 928 bp could be readily visualized in ethidium bromide-stained agarose minigels. An internal probe was used to verify the identity of the amplified product by non-radioactive (digoxigenin-based) Southern blotting; additional confirmation was provided by DNA sequence analysis. A dilution study testing the sensitivity of the PCR indicated that DNA derived from 3 infected neutrophils was sufficient to generate a PCR signal. The specificity of t...
Novel approaches to the purification and identification of cytochrome P450 enzymes in the equine.
Biochemical Society transactions    May 1, 1996   Volume 24, Issue 2 208S doi: 10.1042/bst024208s
Byard J, Marshall DE, Houghton E, Gower DB.No abstract available
Expression of types II, VI and X collagen in equine growth cartilage during development.
Equine veterinary journal    May 1, 1996   Volume 28, Issue 3 189-198 doi: 10.1111/j.2042-3306.1996.tb03772.x
Henson FMD, Davies ME, Schofield PN, Jeffcott LB.The synthesis and expression of collagen types II, VI and X were investigated in growth cartilage selected from a group of 31 horses and ponies in the age range 157 days of gestation to 12 years. Collagen isolation, immunolocalisation and in situ hybridisation techniques were used in order to provide information on the pattern of synthesis of these 3 collagens during endochondral ossification in normal horses. Type II collagen immunoreactivity and mRNA expression was found in each of the 3 zones of growth cartilage chondrocytes in all samples studied, whereas the localisation of both collagen ...
[Distribution of Borna disease virus in naturally infected animals with clinical disease].
Berliner und Munchener tierarztliche Wochenschrift    May 1, 1996   Volume 109, Issue 5 178-183 
Lebelt J, Hagenau K.Borna disease (BD) is a naturally occurring enzootic encephalomyelitis of horses and sheep. The aetiological agent, Borna disease virus (BDV) is an unclassified, neurotropic, negative stranded RNA virus. The study aimed at providing further information on BD of naturally infected animals. Samples obtained from 20 animals (18 horses, 1 donkey, 1 sheep) were investigated by a series of virological and molecular biological tests. The highly sensitive reverse transcription-polymerase chain reaction (RT-PCR) method was used to analyze the tissue distribution of BDV-specific RNA. BDV-specific RNA wa...
Horse complement protein C9: primary structure and cytotoxic activity.
Molecular immunology    May 1, 1996   Volume 33, Issue 7-8 725-733 doi: 10.1016/0161-5890(96)00007-7
Esser AF, Tarnuzzer RW, Tomlinson S, Tatar LD, Stanley KK.Lack of hemolytic activity of horse serum is an inherent property of horse C9. To understand the molecular reasons for this deficiency we have cloned C9 cDNA from a horse liver cDNA library and have sequenced the cDNA yielding the complete coding sequence for horse C9. Purification of C9 from horse plasma and microsequencing established the N-terminus of the mature protein and verified that the correct horse C9 cDNA clone had been isolated. The deduced amino acid sequence corresponds to a mature protein of 526 amino acids that is 77% identical to human C9. It has the same domain structure as h...
Intra-articular morphine and saline injections induce release of large molecular weight proteoglycans into equine synovial fluid.
Zentralblatt fur Veterinarmedizin. Reihe A    May 1, 1996   Volume 43, Issue 3 147-153 doi: 10.1111/j.1439-0442.1996.tb00439.x
Tulamo RM, Raekallio M, Taylor P, Johnson CB, Salonen M.Both morphine and physiologic saline injected intra-articularly into healthy equine tarsocrural joints induced a release of large molecular size proteoglycan (PG) subunits into the synovial fluid (SF) analysed 24 h postinjection. High-performance liquid chromatography (HPLC) with a size-exclusion column was used to assess the high molecular weight proteoglycans in equine synovial fluid (SF). The PG peaks of SF samples eluated separately from SF hyaluronate and other molecular components of the SF in the HPLC chromatographies indicating no interaction between hyaluronate and PG in the SF. Indiv...
Equine dinucleotide repeat polymorphisms at loci LEX002, -003, -004, -005, -007, -008, -009, -010, -011, -013 and -014.
Animal genetics    April 1, 1996   Volume 27, Issue 2 126-127 
Coogle L, Bailey E, Reid R, Russ M.No abstract available
Characterization of two polymorphic horse microsatellites: HMS15 and HMS20.
Animal genetics    April 1, 1996   Volume 27, Issue 2 123 
Guérin G, Bertaud M.No abstract available
Four equine dinucleotide repeats at microsatellite loci UCDEQ5, UCDEQ14, UCDEQ46 and UCDEQ62.
Animal genetics    April 1, 1996   Volume 27, Issue 2 129 
Eggleston-Stott ML, DelValle A, Bowling AT, Bautista M, Zahorchak R, Malyj W.No abstract available
Zoo-FISH delineates conserved chromosomal segments in horse and man. Raudsepp T, Frönicke L, Scherthan H, Gustavsson I, Chowdhary BP.Human chromosome specific libraries (CSLs) were individually applied to equine metaphase chromosomes using the fluorescence in situ hybridization (FISH) technique. All CSLs, except Y, showed painting signals on one or several horse chromosomes. In total 43 conserved chromosomal segments were painted. Homoeology could not, however, be detected for some segments of the equine genome. This is most likely related to the very weak signals displayed by some libraries, rather than to the absence of similarity with the human genome. In spite of divergence from the human genome, dated 70-80 million yea...
Cloning and sequencing of an equine insulin-like growth factor I cDNA and its expression in fetal and adult tissues.
General and comparative endocrinology    April 1, 1996   Volume 102, Issue 1 11-15 doi: 10.1006/gcen.1996.0040
Otte K, Rozell B, Gessbo A, Engström W.A cDNA for equine insulin-like growth factor I (IGF I) has been isolated by reverse transcriptase-polymerase chain reaction and subsequently sequenced. The sequenced fragment contained 465 bp including the coding regions for the signal peptide, the entire mature protein, and 4 amino acids into the E-peptide. Like its human counterpart, the mature equine IGF I peptide contains 70 amino acids and was 100% homologous between horse and man. The 49-amino-acid signal peptide had the threonine in position 26 of the human signal peptide substituted by isoleucine. The nucleotide homology across the ent...
Alterations in the equine herpesvirus type-1 (EHV-1) strain RacH during attenuation.
Zentralblatt fur Veterinarmedizin. Reihe B. Journal of veterinary medicine. Series B    March 1, 1996   Volume 43, Issue 1 1-14 doi: 10.1111/j.1439-0450.1996.tb00282.x
Hübert PH, Birkenmaier S, Rziha HJ, Osterrieder N.The equine herpesvirus type-1 modified live-vaccine strain RacH (256th passage on porcine embryonic kidney cells) was investigated by restriction-enzyme analysis and compared to representative plaque isolates of the 12th passage (RacL11, RacL22) and 185th passage (RacM24, RacM36). The restriction patterns of all Rac plaque isolates differed compared with reference strain Ab4. The left UL terminus was shortened by 0.1 kbp and a missing BamHI site led to the fusion of the f and t fragments. In some Rac derivatives, losses of restriction sites without deletions were observed: 1. One BamHI site lo...
Structural investigation of the complexation properties between horse spleen apoferritin and metalloporphyrins.
Proteins    March 1, 1996   Volume 24, Issue 3 314-321 doi: 10.1002/(SICI)1097-0134(199603)24:3<314::AID-PROT4>3.0.CO;2-G
Michaux MA, Dautant A, Gallois B, Granier T, d'Estaintot BL, Précigoux G.Crystallographic studies of L-chain horse spleen apoferritin (HSF) co-crystallized with Pt-hematoporphyrin IX and Snprotoporphyrin IX have brought significant new insights into structure-function relationships in ferritins. Interactions of HSF with porphyrins are discussed. Structural results show that the nestling properties into HSF are dependent on the porphyrin moiety. (Only protoporphyrin IX significantly interacts with the protein, whereas hematoporphyrin IX does not.) These studies additionally point out the L-chain HSF ability to demetalate metalloporphyrins, a result which is of impor...
Role of heme axial ligands in the conformational stability of the native and molten globule states of horse cytochrome c.
Journal of molecular biology    February 16, 1996   Volume 256, Issue 1 172-186 doi: 10.1006/jmbi.1996.0075
Hamada D, Kuroda Y, Kataoka M, Aimoto S, Yoshimura T, Goto Y.One unique aspect of cytochrome c folding concerns the involvement of the covalently attached heme group and its axial ligands. To elucidate the role of the ligands in stabilizing the native and molten globule states, we studied the conformational and thermodynamic features of the iron-free derivative of horse cyctochrome c (porphyrin-cytochrome c). At neutral pH, far-UV circular dichroism suggested that porphyrin-cytochrome c has native-like alpha-helices, whereas near-UV CD suggested that the side-chains are flexible. Its stability against heat or denaturants was much less than that of the i...
Correlation between DNA restriction fragment length polymorphisms in Leptospira interrogans serovar pomona type kennewicki and host animal source.
Journal of clinical microbiology    February 1, 1996   Volume 34, Issue 2 424-425 doi: 10.1128/jcm.34.2.424-425.1996
Bolin CA, Zuerner RL.Isolates (n = 147) of Leptospira interrogans serovar pomona type kennewicki from cattle, swine, horses, and wildlife were analyzed by DNA restriction endonuclease analysis. Restriction fragment length polymorphisms were identified in DNA digested with HpaII, and the restriction fragment length polymorphisms were correlated with the host animal source of the isolates. These results will be useful in understanding the epidemiology of serovar pomona infections in livestock.