Discriminant analysis is a statistical technique used to classify subjects into distinct groups based on their characteristics. In equine research, this method can be applied to differentiate between various conditions, such as lameness, metabolic disorders, or breed-specific traits in horses. It involves analyzing multiple variables to determine which features are most effective at distinguishing between predefined categories. Discriminant analysis can assist researchers in identifying patterns and relationships within complex datasets, thereby facilitating the understanding of equine health and behavior. This page compiles peer-reviewed research studies and scholarly articles that explore the application, methodology, and outcomes of discriminant analysis in equine science.
Bazvand B, Rashidi A, Zandi MB, Moradi MH, Rostamzadeh J.Population structure and genetic diversity are the key parameters to study the breeding history of animals. This research aimed to provide a characterization of the population structure and to compare the effective population size (Ne), LD decay, genetic diversity, and genomic inbreeding in Iranian native Caspian (n = 38), Turkmen (n = 24) and Kurdish (n = 29) breeds and some other exotic horses consisting of Arabian (n = 24), Fell pony (n = 21) and Akhal-Teke (n = 20). A variety of statistical population analysis techniques, such as principal component analysis (PCA), discriminant analysis of...
Li J, Toyama H, Matsumoto T, Qasimi MI, Inoue R, Murase H, Yamamoto Y, Nagaoka K.Gut microbiota plays a crucial role in various physiological processes, including the regulation of the reproductive system and steroid sex hormones. Throughout the normal estrous cycle of healthy mares, the levels of estradiol-17β (E2) and progesterone (P4) in the blood exhibit periodic changes. To investigate the relationship between cyclic changes in steroid sex hormones and the gut microbiome of mares, we analyzed the fecal microbiota composition in healthy mares during the typical estrous cycle. Blood and fecal samples from five healthy mares were collected, E2 and P4 levels in serum wer...
White SJ, Couetil L, Richard EA, Marti E, Wilson PB.Severe asthma (SA) in horses, resembling human asthma, is a prevalent, debilitating allergic respiratory condition marked by elevated allergen-specific immunoglobulin E (IgE) against environmental proteins; however, research exploring the exposome's influence on IgE profiles is currently limited but holds paramount significance for diagnostic and therapeutic developments. Methods: Thirty-five sports horses were analyzed, consisting of environmentally matched samples from France (5 SA; 6 control), the United States (6 SA; 6 control), and Canada (6 SEA; 6 control). Methods: This intentional cros...
Pfau T, Bolt DM, Fiske-Jackson A, Gerdes C, Hoenecke K, Lynch L, Perrier M, Smith RKW.Diagnostic analgesia and lunging are parts of the equine lameness examination, aiding veterinarians in localizing the anatomical region(s) causing pain-related movement deficits. Expectation bias of visual assessment and complex movement asymmetry changes in lame horses on the lunge highlight the need to investigate data-driven approaches for optimally integrating quantitative gait data into veterinary decision-making to remove bias. A retrospective analysis was conducted with inertial sensor movement symmetry data before/after diagnostic analgesia relative to subjective judgement of efficacy ...
Martin de Bustamante M, Gomez D, MacNicol J, Hamor R, Plummer C.The objective of this study was to describe and compare the fecal bacterial microbiota of horses with equine recurrent uveitis (ERU) and healthy horses using next-generation sequencing techniques. Fecal samples were collected from 15 client-owned horses previously diagnosed with ERU on complete ophthalmic examination. For each fecal sample obtained from a horse with ERU, a sample was collected from an environmentally matched healthy control with no evidence of ocular disease. The Illumina MiSeq sequencer was used for high-throughput sequencing of the V4 region of the 16S rRNA gene. The relativ...
Cappai MG, Dimauro C, Biggio GP, Cherchi R, Accioni F, Pudda F, Boatto G, Pinna W.This study pointed to explore if variations in circulating levels of metabolites in the blood stream of no. 25 feral donkeys occur in view of the different coat color between specimens of Asinara (albino, no. 8) vs. Sardo (dun-grey, no. 17) breed. All individuals involved in this investigation are living in the nature, at Mediterranean latitudes and roam in the same areas all over the National Park of Capo Caccia, where they feed on spontaneous vegetation sources. The study was conducted during the positive photoperiod of the boreal hemisphere (peak in the month of June, 2019) to maximize the ...
Purzyc H, Kobryńczuk F, Bojarski J.The purpose of this study has been to evaluate the applicability of discriminant function analysis to determine gender dimorphism in Hucul horses, based on morphological indices obtained in different stages of life. A total of 243 horses, divided into six age groups, have been examined in its course. For each horse we have measured 12 metric traits, which were then used to calculate 13 biometric indices commonly used in horse breeding in Poland. These have become the basis for defining functions classifying the animals by gender in each of the six age groups. This study answers the question of...
Nicholson CL, Firth EC, Waterland MR, Jones G, Ganesh S, Stewart RB.Although bone fracture has become a serious global health issue, current clinical assessments of fracture risk based on bone mineral density are unable to accurately predict whether an individual is likely to suffer a fracture. There is increasing recognition that the chemical structure and composition, or microstructure, of mineralized tissues has an important role to play in determining the fracture resistance of bone. The objective of this preliminary study was to evaluate the use of specular reflectance Fourier transform infrared (SR FT-IR) microspectroscopy in conjunction with discriminan...
Castanheira M, Paiva SR, Louvandini H, Landim A, Fiorvanti MC, Paludo GR, Dallago BS, McManus C.The environment in which the horse is reared affects its ability to maintain thermal balance which is in turn related to thermal characteristics and regulatory physiological mechanisms. In this study a multivariate analysis of physiological traits in relation to heat tolerance in horses was carried out in the Federal District, Brazil. The aim was to test the ability of these analyses to separate groups of animals and determine which physiological traits are most important in the adaptation to heat stress. Forty adult horses (4 to 13 years) were used, ten from each of four different genetic gro...
Hidalgo M, Rodríguez I, Dorado J, Soler C.This work used semen samples collected from 12 stallions and assessed for sperm morphometry by the Sperm Class Analyzer (SCA) computer-assisted system. A discriminant analysis was performed on the morphometric data from that sperm to obtain a classification matrix for sperm head shape. Thereafter, we defined six types of sperm head shape. Classification of sperm head by this method obtained a globally correct assignment of 90.1%. Moreover, significant differences (p<0.05) were found between animals for all the sperm head morphometric parameters assessed.
Robilliard JJ, Pfau T, Wilson AM.Although a large number of foot-fall sequences are possible in quadrupeds, few sequences are routinely used. The aim of this paper is to characterise, by foot-fall pattern, the gaits used by horses and develop a novel technique to classify symmetric and asymmetric gaits using one common criterion. To achieve this speed and relative foot-fall, timings of all four limbs of eight Icelandic horses were measured using accelerometers. Linear discriminant analysis (LDA) was performed to find criteria that are optimal for discriminating between the different gaits. This also allowed us to evaluate whe...
Rivero JL, Henckel P.Biopsies were taken from three different depths of the gluteus medius muscle of 36 endurance horses aged between four and 17 years. Twenty of the horses were considered excellent performers according to their three fastest records in endurance events over the previous two or three years. The other 16 horses were moderate performers, with a mean racing speed < 3.5 ms-1 (in 120 to 180 km endurance rides), < 4.0 ms-1 (in 80 to 120 km endurance rides) or < 3.75 ms-1 (in 40 to 60 km endurance rides). The biopsy specimens were analysed for fibre type distribution (type I, IIA and IIB), fibr...
Clayton HM.High-speed cinematography was used to record the movements of 12 cutting horses performing a standard test with a mechanical flag. Based on their previous competitive performances, horses were classified into 2 groups: group 1, composed of 5 moderately successful or average performers that had won less than $35,000 in purse money; and group 2, composed of 7 highly successful or elite performances that had amassed greater than $35,000 in competition earnings. Analysis of the results indicated that, compared with horses of the average group, the elite horses had faster reaction times in response...
Hidalgo M, Rodríguez I, Dorado J, Soler C.This work used semen samples collected from 12 stallions and assessed for sperm morphometry by the Sperm Class Analyzer (SCA) computer-assisted system. A discriminant analysis was performed on the morphometric data from that sperm to obtain a classification matrix for sperm head shape. Thereafter, we defined six types of sperm head shape. Classification of sperm head by this method obtained a globally correct assignment of 90.1%. Moreover, significant differences (p<0.05) were found between animals for all the sperm head morphometric parameters assessed.
Castanheira M, Paiva SR, Louvandini H, Landim A, Fiorvanti MC, Paludo GR, Dallago BS, McManus C.The environment in which the horse is reared affects its ability to maintain thermal balance which is in turn related to thermal characteristics and regulatory physiological mechanisms. In this study a multivariate analysis of physiological traits in relation to heat tolerance in horses was carried out in the Federal District, Brazil. The aim was to test the ability of these analyses to separate groups of animals and determine which physiological traits are most important in the adaptation to heat stress. Forty adult horses (4 to 13 years) were used, ten from each of four different genetic gro...
Cappai MG, Dimauro C, Biggio GP, Cherchi R, Accioni F, Pudda F, Boatto G, Pinna W.This study pointed to explore if variations in circulating levels of metabolites in the blood stream of no. 25 feral donkeys occur in view of the different coat color between specimens of Asinara (albino, no. 8) vs. Sardo (dun-grey, no. 17) breed. All individuals involved in this investigation are living in the nature, at Mediterranean latitudes and roam in the same areas all over the National Park of Capo Caccia, where they feed on spontaneous vegetation sources. The study was conducted during the positive photoperiod of the boreal hemisphere (peak in the month of June, 2019) to maximize the ...
Pfau T, Bolt DM, Fiske-Jackson A, Gerdes C, Hoenecke K, Lynch L, Perrier M, Smith RKW.Diagnostic analgesia and lunging are parts of the equine lameness examination, aiding veterinarians in localizing the anatomical region(s) causing pain-related movement deficits. Expectation bias of visual assessment and complex movement asymmetry changes in lame horses on the lunge highlight the need to investigate data-driven approaches for optimally integrating quantitative gait data into veterinary decision-making to remove bias. A retrospective analysis was conducted with inertial sensor movement symmetry data before/after diagnostic analgesia relative to subjective judgement of efficacy ...
Rivero JL, Henckel P.Biopsies were taken from three different depths of the gluteus medius muscle of 36 endurance horses aged between four and 17 years. Twenty of the horses were considered excellent performers according to their three fastest records in endurance events over the previous two or three years. The other 16 horses were moderate performers, with a mean racing speed < 3.5 ms-1 (in 120 to 180 km endurance rides), < 4.0 ms-1 (in 80 to 120 km endurance rides) or < 3.75 ms-1 (in 40 to 60 km endurance rides). The biopsy specimens were analysed for fibre type distribution (type I, IIA and IIB), fibr...
Purzyc H, Kobryńczuk F, Bojarski J.The purpose of this study has been to evaluate the applicability of discriminant function analysis to determine gender dimorphism in Hucul horses, based on morphological indices obtained in different stages of life. A total of 243 horses, divided into six age groups, have been examined in its course. For each horse we have measured 12 metric traits, which were then used to calculate 13 biometric indices commonly used in horse breeding in Poland. These have become the basis for defining functions classifying the animals by gender in each of the six age groups. This study answers the question of...
Nicholson CL, Firth EC, Waterland MR, Jones G, Ganesh S, Stewart RB.Although bone fracture has become a serious global health issue, current clinical assessments of fracture risk based on bone mineral density are unable to accurately predict whether an individual is likely to suffer a fracture. There is increasing recognition that the chemical structure and composition, or microstructure, of mineralized tissues has an important role to play in determining the fracture resistance of bone. The objective of this preliminary study was to evaluate the use of specular reflectance Fourier transform infrared (SR FT-IR) microspectroscopy in conjunction with discriminan...
Robilliard JJ, Pfau T, Wilson AM.Although a large number of foot-fall sequences are possible in quadrupeds, few sequences are routinely used. The aim of this paper is to characterise, by foot-fall pattern, the gaits used by horses and develop a novel technique to classify symmetric and asymmetric gaits using one common criterion. To achieve this speed and relative foot-fall, timings of all four limbs of eight Icelandic horses were measured using accelerometers. Linear discriminant analysis (LDA) was performed to find criteria that are optimal for discriminating between the different gaits. This also allowed us to evaluate whe...
Clayton HM.High-speed cinematography was used to record the movements of 12 cutting horses performing a standard test with a mechanical flag. Based on their previous competitive performances, horses were classified into 2 groups: group 1, composed of 5 moderately successful or average performers that had won less than $35,000 in purse money; and group 2, composed of 7 highly successful or elite performances that had amassed greater than $35,000 in competition earnings. Analysis of the results indicated that, compared with horses of the average group, the elite horses had faster reaction times in response...
Martin de Bustamante M, Gomez D, MacNicol J, Hamor R, Plummer C.The objective of this study was to describe and compare the fecal bacterial microbiota of horses with equine recurrent uveitis (ERU) and healthy horses using next-generation sequencing techniques. Fecal samples were collected from 15 client-owned horses previously diagnosed with ERU on complete ophthalmic examination. For each fecal sample obtained from a horse with ERU, a sample was collected from an environmentally matched healthy control with no evidence of ocular disease. The Illumina MiSeq sequencer was used for high-throughput sequencing of the V4 region of the 16S rRNA gene. The relativ...
White SJ, Couetil L, Richard EA, Marti E, Wilson PB.Severe asthma (SA) in horses, resembling human asthma, is a prevalent, debilitating allergic respiratory condition marked by elevated allergen-specific immunoglobulin E (IgE) against environmental proteins; however, research exploring the exposome's influence on IgE profiles is currently limited but holds paramount significance for diagnostic and therapeutic developments. Methods: Thirty-five sports horses were analyzed, consisting of environmentally matched samples from France (5 SA; 6 control), the United States (6 SA; 6 control), and Canada (6 SEA; 6 control). Methods: This intentional cros...
Li J, Toyama H, Matsumoto T, Qasimi MI, Inoue R, Murase H, Yamamoto Y, Nagaoka K.Gut microbiota plays a crucial role in various physiological processes, including the regulation of the reproductive system and steroid sex hormones. Throughout the normal estrous cycle of healthy mares, the levels of estradiol-17β (E2) and progesterone (P4) in the blood exhibit periodic changes. To investigate the relationship between cyclic changes in steroid sex hormones and the gut microbiome of mares, we analyzed the fecal microbiota composition in healthy mares during the typical estrous cycle. Blood and fecal samples from five healthy mares were collected, E2 and P4 levels in serum wer...
Bazvand B, Rashidi A, Zandi MB, Moradi MH, Rostamzadeh J.Population structure and genetic diversity are the key parameters to study the breeding history of animals. This research aimed to provide a characterization of the population structure and to compare the effective population size (Ne), LD decay, genetic diversity, and genomic inbreeding in Iranian native Caspian (n = 38), Turkmen (n = 24) and Kurdish (n = 29) breeds and some other exotic horses consisting of Arabian (n = 24), Fell pony (n = 21) and Akhal-Teke (n = 20). A variety of statistical population analysis techniques, such as principal component analysis (PCA), discriminant analysis of...
