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Topic:Genes

Genes in horses are segments of DNA that encode the biological instructions necessary for the development, functioning, and reproduction of equine species. These genetic sequences influence a wide range of traits, including coat color, speed, endurance, and susceptibility to diseases. Genetic research in horses focuses on identifying specific genes and genetic markers associated with these traits, as well as understanding the inheritance patterns and genetic diversity within and between horse breeds. Studies in equine genetics contribute to breeding programs, disease prevention strategies, and the overall understanding of horse biology. This page compiles peer-reviewed research studies and scholarly articles that explore the identification, function, and implications of genes in equine health and performance.
Molecular genetic analysis of the major histocompatibility complex in an ELA typed horse family.
Animal genetics    January 1, 1987   Volume 18, Issue 4 323-336 doi: 10.1111/j.1365-2052.1987.tb00776.x
Guerin G, Bertaud M, Chardon P, Geffrotin C, Vaiman M, Cohen D.Restriction fragment length polymorphism was studied in an ELA typed horse family which included a stallion, a mare with two full-sibs, another mare with three full-sibs and, in addition, three paternal half-sibs. DNA samples from all individuals were investigated by Southern blot analysis using three restriction enzymes (EcoRI, HindIII or TaqI) and human cDNA class I, class II (DR beta) and class III (C4) probes. In addition, a genomic class II DQ alpha probe was used. Fragments hybridized with the various probes revealed the existence of DNA sequences homologous to HLA class I, DR beta, DQ a...
Multiple overlapping epitopes in the three antigenic regions of horse cytochrome c1.
Journal of immunology (Baltimore, Md. : 1950)    January 1, 1987   Volume 138, Issue 1 213-219 
Jemmerson R.To gain a better understanding of the diversity of epitopes on a protein, the specificities of 103 monoclonal antibodies to a model antigen, horse cytochrome c(cyt c), were analyzed. The antibodies were generated in in vitro monoclonal, secondary antibody responses against horse cyt c coupled to hemocyanin in splenic fragment cultures. For this assay, horse cyt c-primed murine B lymphocytes were transferred to irradiated, hemocyanin-primed recipients. A panel of seven mammalian cyts c differing at one to six residues out of 104 and cyanogen bromide-cleaved fragments of horse cyt c containing r...
Nucleotide and deduced amino acid sequence of the influenza neuraminidase genes of two equine serotypes.
Virology    December 1, 1986   Volume 155, Issue 2 460-468 doi: 10.1016/0042-6822(86)90207-2
Dale B, Brown R, Miller J, White RT, Air GM, Cordell B.Equine influenza is caused by two serotypes of type A influenza virus, EIV-A1 and EIV-A2. The complete nucleotide sequence of the neuraminidase (NA) genes of both the A1 (N7 subtype) and A2 (N8 subtype) serotype has been determined following cloning of full-length viral NA cDNAs into pBR322. Analysis of the deduced amino acid sequences reveals that the N7 and N8 genes share expected extensive homologies with the previously sequenced N1, N2, and N9 NA subtypes. These homologies include conservation of basic NA gene and protein structure, cysteine residues, potential glycosylation sites, and res...
Lentivirus genomic organization: the complete nucleotide sequence of the env gene region of equine infectious anemia virus.
Virology    December 1, 1986   Volume 155, Issue 2 309-321 doi: 10.1016/0042-6822(86)90195-9
Rushlow K, Olsen K, Stiegler G, Payne SL, Montelaro RC, Issel CJ.The nucleotide sequence of the envelope (env) gene region of equine infectious anemia virus (EIAV), a member of the lentivirus subfamily of retroviruses, has been determined from a clone of integrated proviral DNA for which the gag and pol sequences have been reported previously. The env gene is 859 codons in length and the sequence reported here is consistent with the published biochemical properties of EIAV glycoproteins. The env gene region of EIAV shares considerable structural similarities but negligible sequence homologies with the env genes of other members of the lentivirus subfamily, ...
Molecular cloning and expression in Escherichia coli of equine type I interferons.
DNA (Mary Ann Liebert, Inc.)    October 1, 1986   Volume 5, Issue 5 345-356 doi: 10.1089/dna.1986.5.345
Himmler A, Hauptmann R, Adolf GR, Swetly P.Using human interferon-alpha 2 (IFN-alpha 2) and IFN-beta DNA to probe an equine genomic library we isolated recombinant phages containing genes for equine interferon-alpha (EqIFN-alpha), interferon-beta (EqIFN-beta), and interferon-omega (EqIFN-omega). Sequence and hybridization analyses of these genes reveal that the equine genome contains gene families of each of these three type I interferon classes. The mature proteins of EqIFN-alpha are 71-77% homologous to human IFN-alpha polypeptides, and, when expressed in E. coli, possess antiviral activity on both equine and human cells. By contrast...
Cloning and characterization of an equine cutaneous papillomavirus.
Virology    July 15, 1986   Volume 152, Issue 1 100-109 doi: 10.1016/0042-6822(86)90375-2
O'Banion MK, Reichmann ME, Sundberg JP.Equine papillomaviruses (EqPV) from naturally occurring cases of cutaneous papillomatosis in several ponies and one horse were isolated, cloned, and characterized. Group specific papillomavirus structural antigens were detected in sections of the papillomas by the peroxidase-antiperoxidase technique, and virions were observed in the in the nuclei of cells in the stratum granulosum and corneum. Negatively stained virions purified from papilloma homogenates by isopycnic CsCl centrifugation were 55 nm in diameter and had typical papillomavirus morphology. The entire viral genomes of two separate ...
The gene encoding the equine soluble class I molecule is linked to the horse MHC.
Immunogenetics    January 1, 1986   Volume 24, Issue 2 128-130 doi: 10.1007/BF00373122
Lew AM, Bailey E, Valas RB, Coligan J.No abstract available
Genetic linkage between loci for a red cell alloantigen (U) and serum protease inhibitor (Pi) in the horse.
Animal genetics    January 1, 1986   Volume 17, Issue 3 217-223 doi: 10.1111/j.1365-2052.1986.tb03193.x
Bowling AT.Preliminary evidence for the fifth autosomal linkage group in the horse, comprised of the loci for a red cell alloantigen (U) and serum protease inhibitor (Pi), was demonstrated by means of paternal half-sib groups in thoroughbred, standardbred and Arabian breeds. Recombination frequency in males was estimated to be 0.125 +/- 0.019.
Segregation distortion within the equine MHC; analogy to a mouse T/t-complex trait.
Immunogenetics    January 1, 1986   Volume 24, Issue 4 225-229 doi: 10.1007/BF00364526
Bailey E.Segregation distortion was found for a haplotype of the equine lymphocyte antigen (ELA) system in an extended family of American Standardbred horses. In one sire family, consisting of a stallion and his 17 sons and grandsons, the gene for ELA-A10 (A10) was transmitted to 57.7% of 638 offspring scored (P = 0.001). Significant segregation distortion was not seen for mares or for unrelated stallions, regardless of the ELA markers they possessed. Since the effect was seen for this one sire family and not seen for other stallions with A10, it is unlikely that the gene for A10 is the cause of this p...
XY sex-reversal syndrome in the domestic horse.
Cytogenetics and cell genetics    January 1, 1986   Volume 42, Issue 1-2 8-18 doi: 10.1159/000132243
Kent MG, Shoffner RN, Buoen L, Weber AF.The XY sex-reversal syndrome occurs when a phenotypic mare is born that has the karyotype of a stallion. The syndrome is manifested by both genotypic and phenotypic heterogeneity. The sex-reversed genetic condition occurs frequently within certain pedigrees where XY females have been found and can be readily detected by chromosome karyotyping. The phenotypic spectrum ranges from the feminine mare with a reproductive tract that is within normal limits to the greatly masculinized mare. Pedigree analysis suggests that there are two modes of inheritance: (1) an X-linked recessive or autosomal sex-...
Inhibition of lipases by proteins. A kinetic study with dicaprin monolayers.
The Journal of biological chemistry    February 25, 1985   Volume 260, Issue 4 2268-2273 
Gargouri Y, Pieroni G, Rivière C, Sugihara A, Sarda L, Verger R.We report further investigations on protein inhibition of pancreatic and microbial lipases carried out with the monolayer technique. When beta-lactoglobulin A, melittin, serum albumin, myoglobin, and a protein inhibiting lipase from soybean were preincubated with a dicaprin film at a surface pressure of 35 dynes/cm, no activity was detected with horse pancreatic or Rhizopus delemar lipases. By contrast, Rhizopus arrhizus and Geotrichum candidum lipase activities were not impaired under the same conditions. Experiments using mixed lipid-protein film transfer clearly show that the inhibition of ...
Genetic linkage relationships of equine plasminogen (PLG) with 23 loci.
Animal blood groups and biochemical genetics    January 1, 1985   Volume 16, Issue 1 61-63 doi: 10.1111/j.1365-2052.1985.tb01452.x
Weitkamp LR, Bailey E.No abstract available
Blood group and protein polymorphism gene frequencies for seven breeds of horses in the United States.
Animal blood groups and biochemical genetics    January 1, 1985   Volume 16, Issue 2 93-108 doi: 10.1111/j.1365-2052.1985.tb01458.x
Trommershausen Bowling A, Clark RS.Gene frequencies at 20 blood group and protein polymorphism loci (A, C, D, K, P, Q, U, Al, Tf, Pi, Xk, Es, Gc, PGD, CA, Cat, PGM, AP, Hb and PHI) are given for seven horse breeds in the United States (Thoroughbred, Arabian, Standardbred, Morgan, Quarter Horse, Paso Fino and Peruvian Paso). These data are used to calculate that the battery of tests is at least 96% effective for recognizing incorrect paternity in these breeds. In addition to paternity testing, these tests can be applied to studies of breed relationships.
Classification of orbiviruses: a need for supergroups of genera.
Progress in clinical and biological research    January 1, 1985   Volume 178 267-274 
Della-Porta AJ.There has been concern that the present nomenclature system for the members of the Reoviridae family, and particularly the Orbivirus genus, does not represent the actual relationships exhibited between the members. In order to follow the conventions established by the International Committee for the Taxonomy of Viruses (ICTV), it is tentatively proposed that the present Reoviridae genera be upgraded in status to the following sub-families: reovirinae, orbivirinae, Fijivirinae, cypovirinae, rotavirinae, coltivirinae and phytoreovirinae. Below the sub-family level, divisions of genus (equivalent...
The amino acid sequence of equine alpha-lactalbumin.
Biochemistry international    November 1, 1984   Volume 9, Issue 5 539-546 
Kaminogawa S, McKenzie HA, Shaw DC.The amino acid sequence of equine alpha-lactalbumin has been determined with the aid of an automatic sequencer. The protein chain consists of 123 amino acids and has a Mr of 14218. Elucidation of the structure involved sequence determination of native protein (residues 1-32), cyanogen bromide fragments, and tryptic, chymotryptic and S. aureus V8 proteolytic peptides. Approximately 67% of the residues are identical with corresponding residues of bovine alpha-lactalbumin B, and there is close homology with alpha-lactalbumin of other species.
Genetic organization of the polymorphic equine alpha globin locus and sequence of the BII alpha 1 gene.
Nucleic acids research    October 25, 1984   Volume 12, Issue 20 7847-7858 doi: 10.1093/nar/12.20.7847
Clegg JB, Goodbourn SE, Braend M.The equine alpha globin gene complex comprises two functional alpha genes and an alpha-like pseudogene arranged in the order 5'-alpha 2-(5kb)-alpha 1-(3kb)-psi alpha-3'. A single (embryonic) zeta-like sequence lies within a 12 kb region 5' to the alpha 2 gene. We have determined the sequence of the alpha 1 gene of the BII haplotype, one of two most common haplotypes (the other being BI) which encode alpha globins with either Tyr (BI) or Phe (BII) at codon 24 in both linked alpha genes. In BI and BII the non-allelic alpha 2 and alpha 1 genes respectively code for Gln or Lys at codon 60, thus ac...
Direct evidence for linkage of roan and extension loci in Belgian horses.
The Journal of heredity    September 1, 1984   Volume 75, Issue 5 413-414 doi: 10.1093/oxfordjournals.jhered.a109968
Sponenberg DP, Harper HT, Harper AL.A bay roan Brabant Belgian stallion (ERn/ ern) was bred to eight chestnut American Belgian mares (ern/ ern), producing 57 foals. Thirty foals were bay roan, 25 were chestnut, one was bay, and one was chestnut roan. The recombination rate was 0.035 +/- 0.024, indicating fairly close linkage between the roan (Rn) and extension (E) loci.
Partial amino-acid sequence and cysteine reactivities of cytosolic aspartate aminotransferase from horse heart.
Biochimica et biophysica acta    August 28, 1984   Volume 789, Issue 1 51-56 doi: 10.1016/0167-4838(84)90059-1
Martini F, Angelaccio S, Barra D, Doonan S, Bossa F.Cytosolic aspartate aminotransferase (L-aspartate:2-oxoglutarate aminotransferase, EC 2.6.1.1) from horse heart has five cysteine residues, two of which can be titrated with 5,5'-dithiobis(2-nitrobenzoid acid) in the native enzyme with no impairment of catalytic activity. The rate of modification is unaffected by the presence of substrates. Reaction with N-ethylmaleimide leads to loss of catalytic activity, the rate of inactivation being increased by the presence of substrates. Peptides containing 361 amino-acid residues (about 88% of the total number in the protein) have been isolated and ali...
[Multiple forms of horse pepsin].
Biokhimiia (Moscow, Russia)    June 1, 1984   Volume 49, Issue 6 1026-1037 
Gonchar MV, Lavrenova GI, Rudenskaia GN, Gaĭda AV, Stepanov VM.Using ion-exchange and affinity chromatography and isoelectrofocusing, eight forms of pepsin with pI 1.6, 1.8, 2.1, 2.3, 2.6, 2.8, 3.2 and 3.6, were isolated from horse gastric juice. The molecular weights, amino acid composition, N-terminal sequence and functional activity of these multiple forms were determined. Partial primary structure of tryptic peptides of pepsin with pI 2.3 was investigated. The analyzed partial sequences of the forms with pI 1.8, 2.1, 2.3, and 2.6 have identical structures which differ from the amino acid sequence of pepsin with pI 3.2 by four substituents. In terms of...
Genetic linkage in the horse. I. Linkage relationships among 15 blood marker loci.
Hereditas    January 1, 1984   Volume 100, Issue 2 199-208 doi: 10.1111/j.1601-5223.1984.tb00120.x
Sandberg K, Andersson L.No abstract available
Genetic markers in the blood of the Italian standardbred trotter horse.
Animal blood groups and biochemical genetics    January 1, 1984   Volume 15, Issue 2 137-141 doi: 10.1111/j.1365-2052.1984.tb01109.x
Romagnoli A, Lubas G, Mengozzi G, Guidi G.No abstract available
Comparison of ELY-2.1 with blood group and ELY-1 markers in the horse.
Animal blood groups and biochemical genetics    January 1, 1984   Volume 15, Issue 2 117-122 doi: 10.1111/j.1365-2052.1984.tb01106.x
Bailey E, Henney PJ.The distribution of ELY-2 was compared to the distribution of blood group factors Aa, Ab, Ac, Ae, Ca, Da, Db, Dc, Dd, De, Df, Dh, Dk, Ka, Pa, Pb, X, Qa, Qc, Ua, and W in 2465 American Standardbred horses and to ELY-1 in 193 American Standardbred horses. The distribution patterns were different in each case. The segregation of ELY-2.1 and factors at the A, C, D, K, P, Q, U and T (W) blood group loci and at the ELA locus indicated that ELY-2.1 is not a product of any of those loci. No segregation data were available for the ELY-1 locus. Family studies indicated that the gene for ELY-2.1 is not s...
The plasma protease inhibitor system (Pi) of Standardbred horses.
Animal blood groups and biochemical genetics    January 1, 1984   Volume 15, Issue 3 191-206 doi: 10.1111/j.1365-2052.1984.tb01116.x
Bell K, Patterson S, Pollitt CC.The plasma protease inhibitor system (Pi) of Standardbred horses was studied by thin-layer, high-voltage, acid polyacrylamide gel electrophoresis (pH 4.6) followed by protein staining and staining for trypsin and chymotrypsin inhibition. In addition to the eight Thoroughbred alleles (PiF, G, I, L, N, S1, S2, U), another 10 alleles, designated PiH, J, K, O, P, Q, R, V, X, Z, were postulated to account for the 98 Pi types which were observed in Standardbreds. Detailed inhibitory spectra of the 'new' alleles were determined and further exceptions to the Pi1, Pi2 classification of Juneja et al. (1...
Lymphocyte alloantigens of the horse. III. ELY-2.1: a lymphocyte alloantigen not coded for by the MHC.
Animal blood groups and biochemical genetics    January 1, 1984   Volume 15, Issue 2 103-115 doi: 10.1111/j.1365-2052.1984.tb01105.x
Antczak DF.A new polymorphic locus of the horse which has several unusual properties is described. The suggested name for the locus is ELY-2. The gene product of one allele at this locus, designated ELY-2.1, has been identified with antisera raised as a result of pregnancy. Antibody to ELY-2.1 was first detected on day 55 after conception in the serum of a mare in first pregnancy. This early onset of antibody is similar to that seen for antibody to ELA antigens, and suggests that the source of the antigenic stimulus may be the tissue of the equine endometrial cups. The antisera identifying ELY-2.1 are cy...
Quantitation of serum phospholipase A2 by enzyme-diffusion in lecithin agar gels. A comparative study in man and animals.
Acta veterinaria Scandinavica    January 1, 1984   Volume 25, Issue 2 229-241 doi: 10.1186/BF03547267
Westermarck E, Lindberg LA, Sandholm M.A sensitive gel-diffusion assay for determination of phospholipase A was developed. PLA standards, serum, faecal and pancreas homogenate samples with PLA-activity were allowed to diffuse from wells into agar-gels containing lecithin-membranes. The turbidity cleared radially upon PLA-activity. The diameters of the cleared zones showed a linear relationship with the log of the enzyme concentration. Serum samples resulted in some turbidity within the cleared zones. This interference originating from serum lipoproteins could be abolished by hydrophobic absorption. The gel-diffusion method was comp...
Proton nuclear magnetic resonance studies of histidines in horse carbonic anhydrase I.
Biochimica et biophysica acta    October 28, 1983   Volume 748, Issue 2 300-307 doi: 10.1016/0167-4838(83)90307-2
Forsman C, Jonsson BH, Lindskog S.The 250 MHz 1H-NMR spectrum of horse carbonic anhydrase I (or B) (carbonate hydro-lyase, EC 4.2.1.1) was measured as a function of pH under various conditions. Eight resonances corresponding to histidine C-2 protons and four resonances corresponding to histidine C-4 protons were identified and assigned to individual histidine residues in the enzyme molecule. Substantial similarities between horse and human carbonic anhydrases I were demonstrated. While the human enzyme has three titratable histidine residues in its active site, the horse enzyme has only two, His-67 in the human enzyme being re...
Linkage of the equine serum esterase (Es) and mitochondrial glutamate oxaloacetate transaminase (GOTM) loci. A horse-mouse homology.
The Journal of heredity    September 1, 1983   Volume 74, Issue 5 361-364 doi: 10.1093/oxfordjournals.jhered.a109811
Andersson L, Sandberg K, Adalsteinsson S, Gunnarsson E.Three previously described electrophoretic phenotypes of mitochondrial glutamate oxaloacetate transaminase (GOTM) in horse leukocytes are shown to be controlled by two codominant alleles at a single autosomal locus. The GOTM locus is linked to the serum esterase locus (Es), as no recombination between these loci was observed among 16 informative offspring in one sire family. The results assign GOTM to equine linkage group (LG) II. The hypothesis that a part of LG II (e-Es) shares homologies with mouse chromosome 8 is thus confirmed, as the murine homologue of GOTM is located within the cluster...
The genetic control of antibody formation.
Veterinary immunology and immunopathology    March 1, 1983   Volume 4, Issue 1-2 3-42 doi: 10.1016/0165-2427(83)90055-7
Seide RK, Kehoe JM.Studies of the molecular biology of lymphoid cells have markedly increased our understanding of how millions of different antibodies can be synthesized by a single animal. To date, the most detailed understanding has been achieved for the mouse, primarily because of the relatively greater experimental availability of this species. These studies, as well as those involving other species, have shown that the complete genes for antibody polypeptide chains are assembled from disparate genetic elements which are originally widely separated in the genome. The assembly process itself, together with t...
Histocompatibility polymorphisms of domestic animals.
Advances in veterinary science and comparative medicine    January 1, 1983   Volume 27 1-76 
Newman MJ, Antczak DF.No abstract available
Genetics of four plasma protein loci in Equus przewalskii: new alleles at the prealbumin, postalbumin and transferrin loci.
Animal blood groups and biochemical genetics    January 1, 1983   Volume 14, Issue 1 7-16 doi: 10.1111/j.1365-2052.1983.tb01055.x
Putt W, Whitehouse DB.This paper reports genetic variation at the prealbumin (Pr), postalbumin (Pa) and transferrin (Tf) loci in Equus przewalskii found using thin layer isoelectric focusing and an amphoteric separator. The method resolves all three loci plus serum esterase (Es) on a single gel, and typing of all four loci is readily achieved. In addition to the esterase alleles previously reported by Fisher & Scott (1979), five alleles were found at the Pr locus, three at the Pa locus and six at the Tf locus. Analysis of several mating types confirms inheritance is autosomal and codominant for all four loci.