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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
An infanticide attempt by a free-roaming feral stallion (Equus caballus).
Biology letters    November 21, 2008   Volume 5, Issue 1 23-25 doi: 10.1098/rsbl.2008.0571
Gray ME.Infanticide by adult males occurs in a variety of species. While infanticidal attacks have been documented in several equid species in captivity, it has never been witnessed in free-roaming feral horses. I report an infanticide attempt by a free-living feral stallion on a recently born female foal. The stallion picked up the foal by the shoulders, tossed it around twice and bit in on the neck several times. The dam of the foal charged the stallion and successfully protected her foal from additional attacks. The foal survived the attack and later weaned successfully. The stallion recently took ...
Phenotypic and genotypic characterization of Arcanobacterium haemolyticum isolates from infections of horses.
Journal of clinical microbiology    November 19, 2008   Volume 47, Issue 1 124-128 doi: 10.1128/JCM.01933-08
Hassan AA, Ulbegi-Mohyla H, Kanbar T, Alber J, Lämmler C, Abdulmawjood A, Zschöck M, Weiss R.The present study was designed to characterize phenotypically and genotypically seven Arcanobacterium haemolyticum strains obtained from infections of six horses. All seven strains showed the cultural and biochemical properties typical of A. haemolyticum and were susceptible to most of the antibiotics tested. The species identification could be confirmed by amplification and sequencing of the 16S rRNA gene and the 16S-23S rRNA intergenic spacer region and by PCR amplification of species-specific parts of the gene encoding phospholipase D in A. haemolyticum. Use of the latter could possibly imp...
The involvement of beta-1,4-Galactosyltransferase and N-Acetylglucosamine residues in fertilization has been lost in the horse.
Reproductive biology and endocrinology : RB&E    November 14, 2008   Volume 6 51 doi: 10.1186/1477-7827-6-51
Mugnier S, Boittin S, Douet C, Monget P, Magistrini M, Goudet G.In human and rodents, sperm-zona pellucida binding is mediated by a sperm surface Galactosyltransferase that recognizes N-Acetylglucosamine residues on a glycoprotein ZPC. In large domestic mammals, the role of these molecules remains unclear: in bovine, they are involved in sperm-zona pellucida binding, whereas in porcine, they are not necessary. Our aim was to clarify the role of Galactosyltransferase and N-Acetylglucosamine residues in sperm-zona pellucida binding in ungulates. For this purpose, we analyzed the mechanism of sperm-zona pellucida interaction in a third ungulate: the horse, si...
Assessment of sperm DNA fragmentation in stallion (Equus caballus) and donkey (Equus asinus) using the sperm chromatin dispersion test.
Reproduction in domestic animals = Zuchthygiene    November 13, 2008   Volume 44, Issue 5 823-828 doi: 10.1111/j.1439-0531.2008.01091.x
Cortés-Gutiérrez EI, Crespo F, Serres-Dalmau C, Gutiérrez de las Rozas AL, Dávila-Rodríguez MI, López-Fernández C, Gósalvez J.Sperm DNA fragmentation (sDF) is an important parameter to assessing sperm quality. Information about sperm quality is not available for donkeys, especially in some breeds at risk of extinction. The objectives of this research were to test the four commercial variants of sperm chromatin dispersion test (SCD; sperm Halomax test), originally developed to assess sDF in boars, bulls, rams and stallions, in order to scrutinize their applicability in the study of sDF in a donkey breed at risk of extinction (Zamorano-Leonesa), for which there is no specific test available to analyze sperm at present....
Partial deletion of the LAMA3 gene is responsible for hereditary junctional epidermolysis bullosa in the American Saddlebred Horse.
Animal genetics    November 11, 2008   Volume 40, Issue 1 35-41 doi: 10.1111/j.1365-2052.2008.01795.x
Graves KT, Henney PJ, Ennis RB.Laminin 5 is a heterotrimeric basement membrane protein integral to the structure and function of the dermal-epidermal junction. It consists of three glycoprotein subunits: the alpha3, beta3 and gamma2 chains, which are encoded by the LAMA3, LAMB3 and LAMC2 genes respectively. A mutation in any of these genes results in the condition known as hereditary junctional epidermolysis bullosa (JEB). A 6589-bp deletion spanning exons 24-27 was found in the LAMA3 gene in American Saddlebred foals born with the skin-blistering condition epitheliogenesis imperfecta. The deletion confirms that this autoso...
RNA interference protects horse cells in vitro from infection with Equine Arteritis Virus.
Antiviral research    November 11, 2008   Volume 81, Issue 3 209-216 doi: 10.1016/j.antiviral.2008.10.004
Heinrich A, Riethmüller D, Gloger M, Schusser GF, Giese M, Ulbert S.Equine Arteritis Virus (EAV) belongs to the Arteriviridae and causes viral arteritis in horses. In an attempt to develop novel and save therapies against the infection it was tested whether EAV is susceptible to RNA interference (RNAi) in an equine in vitro system. Horse cells were transfected with chemically synthesized small interfering RNA oligonucleotides (siRNAs) and challenged with EAV. Application of these siRNAs led to a significant protection of the cells, and virus titers decreased drastically. siRNAs derived from DNA plasmids expressing small hairpin RNAs (shRNAs) were also effectiv...
Molecular phylogeny of equine herpesvirus 1 isolates from onager, zebra and Thomson’s gazelle.
Archives of virology    November 11, 2008   Volume 153, Issue 12 2297-2302 doi: 10.1007/s00705-008-0247-y
Ghanem YM, Fukushi H, Ibrahim ES, Ohya K, Yamaguchi T, Kennedy M.Viruses related to equine herpesvirus type 1 (EHV-1) were isolated from an aborted fetus of an onager (Equus hemionus) in 1984, an aborted fetus of Grevy's zebra (Equus grevyi) in 1984 and a Thomson's gazelle (Gazella thomsoni) with nonsuppurative encephalitis in 1996, all in the USA. The mother of the onager fetus and the gazelle were kept near plains zebras (Equus burchelli). In phylogenetic trees based on the nucleotide sequences of the genes for glycoproteins B (gB), I (gI), and E (gE), and teguments including ORF8 (UL51), ORF15 (UL45), and ORF68 (US2), the onager, Grevy's zebra and gazell...
Leukocyte-derived and endogenous matrix metalloproteinases in the lamellae of horses with naturally acquired and experimentally induced laminitis.
Veterinary immunology and immunopathology    November 7, 2008   Volume 129, Issue 3-4 221-230 doi: 10.1016/j.vetimm.2008.11.003
Loftus JP, Johnson PJ, Belknap JK, Pettigrew A, Black SJ.Inflammation and dysregulation of endogenous matrix metalloproteinase (MMP) production are implicated in the development of equine laminitis. In this study, we examine quantitative relationships among levels of leukocyte-derived proMMP-9 and MMP-9, lamellar proMMP-2 and MMP-2, and expression of proMMP-2 processing enzymes, MT1-MMP/PACE4, as steps towards determining whether inflammation and dysregulation of endogenous MMP production are independent or co-dependent processes. Methods: Archived samples of lamellae from horses with naturally acquired laminitis (n = 12), and from horses administer...
Genetic characterization and polymorphisms for parentage testing of the Jeju horse using 20 microsatellite loci.
The Journal of veterinary medical science    November 5, 2008   Volume 70, Issue 10 1111-1115 doi: 10.1292/jvms.70.1111
Choi SK, Cho CY, Yeon SH, Cho BW, Cho GJ.Genetic characterization of the Jeju horse (JH) was performed to construct a correct pedigree of the JH family. A total of 111 horses including 79 JH were genotyped using 20 microsatellite loci. The number of alleles varied from 5 to 11 (mean 7.45) in the JH. The observed heterozygosity and expected heterozygosity ranged from 0.293 to 0.891 and from 0.357 to 0.841, respectively. The polymorphic information contents (PIC) ranged from 0.335 to 0.816. AHT4, ASB2, ASB17, ASB23, CA425, HMS2, HMS3, HTG10, LEX3 and VHL20 loci had relatively high PIC values (> 0.7). The total exclusion probability ...
Spermatozoa morphology during the breeding season in Thoroughbred stallions in Japan.
The Journal of veterinary medical science    November 5, 2008   Volume 70, Issue 10 1121-1124 doi: 10.1292/jvms.70.1121
Koyago M, Nakada K, Tsunoda N, Moriyoshi M, Sawamukai Y.The morphology of spermatozoa of modern Thoroughbred stallions in Japan was investigated during the breeding season. A total of 299 semen samples were collected from the penises of 16 stallions immediately after service. The rate of abnormalities in sperm heads and tails, spermatozoa with cytoplasmic droplets and slides with medusa cells to total observed slides in each stallion were 3.9 +/- 2.1%, 11.5 +/- 5.9%, 2.4 +/- 2.6% and 20.1%, respectively. The values for the area, length, width and aspect ratio of the stallion sperm head were 12.54 +/- 1.34 microm(2), 5.93 +/- 0.40 microm, 2.69 +/- 0...
Associations of sex, breed, and age with cervical vertebral compressive myelopathy in horses: 811 cases (1974-2007).
Journal of the American Veterinary Medical Association    November 5, 2008   Volume 233, Issue 9 1453-1458 doi: 10.2460/javma.233.9.1453
Levine JM, Ngheim PP, Levine GJ, Cohen ND.To determine sex, breed, and age distributions in a population of horses with cervical vertebral compressive myelopathy (CVCM), compared with contemporaneous control horses. Methods: Retrospective case-control study. Methods: 811 horses with CVCM and 805 control horses. Methods: The Veterinary Medical Database was searched to identify horses with CVCM and contemporaneous control horses registered between July 1974 and August 2007. Admission date, admitting institution, sex, breed, age at the time of registration in the database, weight, and discharge status (alive, died, or euthanized) were re...
Antimicrobial resistance in companion animals.
Animal health research reviews    November 5, 2008   Volume 9, Issue 2 169-176 doi: 10.1017/S1466252308001485
Scott Weese J.Antimicrobial resistance (AMR) is an emerging problem in companion animals, because of difficult-to-treat infections, possible pressure to use antimicrobials that are important in human medicine, and potential zoonotic transmission. The extent and importance of AMR in companion animals are poorly understood, in part because of limited surveillance; however, it is clear that resistance is problematic in many pathogens and commensals, including staphylococci, enterococci, Escherichia coli and Salmonella.
In vitro analysis of expression vectors for DNA vaccination of horses: the effect of a Kozak sequence.
Acta veterinaria Scandinavica    November 4, 2008   Volume 50, Issue 1 44 doi: 10.1186/1751-0147-50-44
Olafsdóttir G, Svansson V, Ingvarsson S, Marti E, Torsteinsdóttir S.One of the prerequisite for developing DNA vaccines for horses are vectors that are efficiently expressed in horse cells. We have analysed the ectopic expression of the human serum albumin gene in primary horse cells from different tissues. The vectors used are of pcDNA and pUC origin and include the cytomegalovirus (CMV) promoter. The pUC vectors contain CMV intron A whereas the pcDNA vectors do not. Insertion of intron A diminished the expression from the pcDNA vectors whereas insertion of a Kozak sequence upstream of the gene in two types of pUC vectors increased significantly the in vitro ...
Elimination profiles of flurbiprofen and its metabolites in equine urine for doping analysis.
Talanta    October 31, 2008   Volume 55, Issue 6 1173-1180 doi: 10.1016/s0039-9140(01)00545-8
Tsitsimpikou C, Spyridaki MH, Georgoulakis I, Kouretas D, Konstantinidou M, Georgakopoulos CG.Flurbiprofen and its main acidic metabolites were detected in equine urine after a single-dose administration of 500 mg flurbiprofen to two 2.5-3.5-years-old mares, in order to be used in equine doping control routine analysis. The urine levels of the parent drug were determined using GC/MS. Five acidic metabolites were found in the urine. The structure of the proposed metabolites was confirmed by HRMS accurate mass measurements. The highest flurbiprofen concentration was 204 mug ml(-1) at 1-3 h post administration. Flurbiprofen could be detected for 24-37 h in urine using the standard screeni...
Riding ‘white’ horses reveals new insights into pigmentation and melanoma.
Pigment cell & melanoma research    October 30, 2008   Volume 21, Issue 6 596-597 doi: 10.1111/j.1755-148X.2008.00515.x
Norris BJ.No abstract available
[Toward exploration of morphological disparity of measurable traits of mammalian skull. 1. Interrelation between different forms of group variation].
Zhurnal obshchei biologii    October 30, 2008   Volume 69, Issue 5 344-354 
Pavlinov IIa, Nanova OG, Spasskaia NN.Interrelations between some forms of group variation (FGVs) (age, sex, geographic, inter-species, differences among breeds) of 12 to 15 measurable skull traits are studied in 6 mammal species (pine marten, polar fox, Przewalskii horse, and 3 jird species) by means of dispersion analysis (model III, MANOVA). The above FGVs are considered as factors in the MANOVA, and skull traits are considered as dependent variables. To obtaine commeasurables estimates for the FGVs, each of them is assessed numerically as a portion of its dispersion in the entire morphological disparity defined for each charac...
Glial cells missing homologue 1 is induced in differentiating equine chorionic girdle trophoblast cells.
Biology of reproduction    October 29, 2008   Volume 80, Issue 2 227-234 doi: 10.1095/biolreprod.108.070920
de Mestre AM, Miller D, Roberson MS, Liford J, Chizmar LC, McLaughlin KE, Antczak DF.The objective of this study was to identify transcription factors associated with differentiation of the chorionic girdle, the invasive form of equine trophoblast. The expression patterns of five transcription factors were determined on a panel of conceptus tissues from early horse pregnancy. Tissues from Days 15 through 46 were tested. Eomesodermin (EOMES), glial cells missing homologue 1 (GCM1), heart and neural crest derivatives expressed transcript 1 (HAND1), caudal type homeobox 2 (CDX2), and distal-less homeobox 3 (DLX3) were detected in horse trophoblast, but the expression patterns for...
Nuclear configuration, spindle morphology and cytoskeletal organization of in vivo maturing horse oocytes.
Reproduction in domestic animals = Zuchthygiene    October 28, 2008   Volume 44, Issue 3 435-440 doi: 10.1111/j.1439-0531.2008.01105.x
Siddiqui MA, Gastal EL, Ju JC, Gastal MO, Beg MA, Ginther OJ.Horse oocytes (n = 37) were recovered in vivo from pre-ovulatory follicles 30 h after an ovulation-inducing hCG injection and were examined by fluorescent staining and confocal microscopy. Percentages of metaphase-I (MI), metaphase-II (MII) and atypical oocytes were 11%, 78% and 11% respectively. Microtubules were concentrated in the meiotic spindle in both MI and MII oocytes. Chromosomes in the metaphase plate were anchored at the equatorial region of the spindle. Spindle orientation was perpendicular to the oolema in all MI oocytes, whereas in MII oocytes, 66% were parallel and 34% were perp...
Development of one vs multiple ovulatory follicles and associated systemic hormone concentrations in mares.
Reproduction in domestic animals = Zuchthygiene    October 23, 2008   Volume 44, Issue 3 441-449 doi: 10.1111/j.1439-0531.2008.01109.x
Ginther OJ, Jacob JC, Gastal MO, Gastal EL, Beg MA.Ablation of follicles > or = 6 mm in diameter and treatment with PGF2alpha 10 days after ovulation were used to induce the development of ovulatory waves. Comparisons were made between induced waves with one (33 waves, 72%) and multiple (13 waves, 28%) ovulatory follicles. Diameter deviation was defined as the separation of follicles into dominant and subordinate categories. Multiple ovulatory follicles were preceded by more (p or = 20 mm at the beginning of deviation, higher LH preceding deviation (approached significance, p < 0.08), lower (p < 0.05) concentrations of FSH on the day...
Morphology and head morphometric characters of sperm in Thai native crossbred stallions.
Acta veterinaria Scandinavica    October 22, 2008   Volume 50, Issue 1 41 doi: 10.1186/1751-0147-50-41
Phetudomsinsuk K, Sirinarumitr K, Laikul A, Pinyopummin A.One of the semen quality parameters use to determine fertility is the percentage of sperm that express normal morphology. Sperm head morphometry is also correlated with fertility. The objectives of this study were 1) to investigate the sperm morphology and normal sperm head morphometry of Thai native crossbred stallions, and 2) to compare our results with the characteristics of proven fertile sperm from purebred stallions. Methods: Semen samples were collected monthly from nine stallions, of which five were Thai native crossbred (T) and four were purebred of proven fertility (F: F1 was a Stand...
Equine arteritis virus: a new isolate from the presumable first carrier stallion in Argentina and its genetic relationships among the four reported unique Argentinean strains.
Archives of virology    October 21, 2008   Volume 153, Issue 11 2111-2115 doi: 10.1007/s00705-008-0224-5
Metz GE, Serena MS, Ocampos GM, Panei CJ, Fernandez VL, Echeverría MG.Equine arteritis virus (EAV) was isolated from a testicle of the presumable first stallion infected with EAV in Argentina. This virus isolate (named LT-LP-ARG) was confirmed by GP5-specific PCR and indirect immunofluorescence assays. The PCR product was sequenced, and the phylogenetic analysis revealed that the LT-LP-ARG strain of EAV forms a monophyletic group, together with other strains previously isolated in our laboratory (LP02 group). However, all Argentinean EAV strains belong to a polyphyletic group. We believe that the virus isolate presented in this report could be the origin of EAV ...
Effect of HCG in the presence of HCG antibodies on the follicle, hormone concentrations, and oocyte in mares.
Reproduction in domestic animals = Zuchthygiene    October 21, 2008   Volume 44, Issue 3 474-479 doi: 10.1111/j.1439-0531.2008.01133.x
Siddiqui MA, Gastal EL, Gastal MO, Beg MA, Ginther OJ.Follicle blood flow, follicular-fluid and plasma hormone concentrations, and oocyte quality were studied 30 h after an ovulation-inducing hCG treatment when the pre-ovulatory follicle was 32 mm. Mares were grouped as positive (n = 16) and negative (n = 44) for hCG antibodies before the experimental hCG treatment. Percentage of the follicle wall with blood flow signals was less (p < 0.05) in the antibody positive group than in the negative group. The concentrations of follicular-fluid oestradiol and free IGF1, and plasma oestradiol were greater (p < 0.001), and follicular-fluid progesterone (p ...
Maternal transfer of IgE and subsequent development of IgE responses in the horse (Equus callabus).
Veterinary immunology and immunopathology    October 19, 2008   Volume 127, Issue 3-4 203-211 doi: 10.1016/j.vetimm.2008.10.316
Marti E, Ehrensperger F, Burger D, Ousey J, Day MJ, Wilson AD.Immunoglobulin E (IgE) mediates the immune response to parasites, but can also cause allergies. In humans maternal IgE is not transferred to cord blood and high levels of cord blood IgE are associated with subsequent allergy. In horses, both maternal IgG and IgE are transferred via colostrum; the IgE levels in the mare's serum, the colostrum and the foal's serum are correlated but the consequences of IgE transfer to foals are not known. By about 6 weeks of age the levels of IgE in foal serum have dropped to a nadir, at 6 months of age the level of IgE has risen only very slightly and is no lon...
Third International Symposium on Biomolecular Archaeology. Trail of mare’s milk leads to first tamed horses.
Science (New York, N.Y.)    October 18, 2008   Volume 322, Issue 5900 368 doi: 10.1126/science.322.5900.368a
Travis J.No abstract available
Expression microarrays in equine sciences.
Veterinary immunology and immunopathology    October 18, 2008   Volume 127, Issue 3-4 197-202 doi: 10.1016/j.vetimm.2008.10.314
Ramery E, Closset R, Art T, Bureau F, Lekeux P.Microarrays have become an important research tool for life science researchers. Expression microarrays are capable of profiling the gene expression pattern of tens of thousands of genes in a single experiment. It appears to be the platform of choice for parallel gene expression profiling. Various equine-specific gene expression microarrays have been generated and used. However, homologous microarrays are not yet commercially available for the horse. An alternative is the use of heterologous microarrays, mainly microarrays specific for mice or humans. Although the use of microarrays in equine ...
Follicle deviation in ovulatory follicular waves with one or two dominant follicles in mares.
Reproduction in domestic animals = Zuchthygiene    October 18, 2008   Volume 44, Issue 2 248-254 doi: 10.1111/j.1439-0531.2007.01048.x
Jacob JC, Gastal EL, Gastal MO, Carvalho GR, Beg MA, Ginther OJ.The follicle and hormone aspects of diameter deviation and development of one dominant (>/=28 mm) follicle (1DF) vs two dominant follicles (2DF) were studied in 32 ovulatory follicular waves in mares. Follicles were ranked each day as F1 (largest) to F3. The beginning of deviation was designated day 0 and preceded the first increase in the differences in diameter between F1 and F2 in the 1DF group and between a combination of F1 and F2 vs F3 in the 2DF group. One dominant follicle and 2DF developed in 21 (66%) and 11 (34%) waves, respectively. Double ovulations occurred in only one of the w...
Characteristics, diagnosis, and treatment of inherited platelet disorders in mammals.
Journal of the American Veterinary Medical Association    October 17, 2008   Volume 233, Issue 8 1251-1190 doi: 10.2460/javma.233.8.1251
Boudreaux MK.Inherited intrinsic platelet disorders have been identified in dogs, cattle, horses, and cats as well as other animals. The prevalence of mutations in some breeds is high, making these disorders potentially as common as von Willebrand disease in certain breed lineages.
Horse domestication and conservation genetics of Przewalski’s horse inferred from sex chromosomal and autosomal sequences.
Molecular biology and evolution    October 17, 2008   Volume 26, Issue 1 199-208 doi: 10.1093/molbev/msn239
Lau AN, Peng L, Goto H, Chemnick L, Ryder OA, Makova KD.Despite their ability to interbreed and produce fertile offspring, there is continued disagreement about the genetic relationship of the domestic horse (Equus caballus) to its endangered wild relative, Przewalski's horse (Equus przewalskii). Analyses have differed as to whether or not Przewalski's horse is placed phylogenetically as a separate sister group to domestic horses. Because Przewalski's horse and domestic horse are so closely related, genetic data can also be used to infer domestication-specific differences between the two. To investigate the genetic relationship of Przewalski's hors...
Age-related changes in cytokine expression by neutrophils of foals stimulated with virulent Rhodococcus equi in vitro.
Veterinary immunology and immunopathology    October 17, 2008   Volume 127, Issue 3-4 212-219 doi: 10.1016/j.vetimm.2008.10.004
Nerren JR, Martens RJ, Payne S, Murrell J, Butler JL, Cohen ND.Although evidence exists that neutrophils play a vital role in resistance to infection with Rhodococcus equi, the means by which neutrophils exert their effects have not been clearly defined. In the present study we evaluated differences in cytokine expression by unstimulated and R. equi-stimulated neutrophils obtained from newborn foals and subsequently at 2-, 4-, and 8-weeks of age. Stimulation with virulent R. equi induced significantly (P<0.05) greater expression of IFNgamma, TNFalpha, IL-6, IL-8, IL-12p40, IL-12p35, and IL-23p19 mRNA relative to expression by unstimulated neutrophils, ...
Temporal detection of Lawsonia intracellularis using serology and real-time PCR in Thoroughbred horses residing on a farm endemic for equine proliferative enteropathy.
Veterinary microbiology    October 15, 2008   Volume 136, Issue 1-2 173-176 doi: 10.1016/j.vetmic.2008.10.004
Pusterla N, Jackson R, Wilson R, Collier J, Mapes S, Gebhart C.The goals of this study were to evaluate titers of antibodies against Lawsonia intracellularis in 68 resident broodmares from a farm known to be endemic for equine proliferative enteropathy (EPE) and to evaluate maternal antibodies, occurrence of seroconversion and fecal shedding in their foals. Serum samples collected from mares at delivery and from foals pre- and post-colostrum ingestion and monthly thereafter were tested for the presence of L. intracellularis antibodies by immunoperoxidase monolayer assay (IPMA). Further, feces collected from mares at delivery and foals post-partum and mont...