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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Quality and fertilizing ability in vivo of sex-sorted stallion spermatozoa.
Reproduction in domestic animals = Zuchthygiene    December 15, 2008   Volume 45, Issue 2 331-335 doi: 10.1111/j.1439-0531.2008.01314.x
Mari G, Rizzato G, Merlo B, Iacono E, Bucci D, Seren E, Tamanini C, Galeati G, Spinaci M.Little information is available on the quality of stallion spermatozoa after sex sorting. The objectives of the present study were to assess the quality of sex-sorted stallion spermatozoa and determine its fertilizing ability after hysteroscopic low dose insemination. Ejaculates from four stallions were collected and sorted by a MoFlo SX flow cytometer/sperm sorter. Before and after sorting, spermatozoa were evaluated for motility by Computer Assisted Sperm Analysis, viability (SYBR 14-propidium iodide), mitochondrial function (JC-1) and acrosomal status (fluorescein isothiocyanate Pisum sativ...
Protective effects of the cumulus-corona radiata complex during vitrification of horse oocytes.
Reproduction (Cambridge, England)    December 10, 2008   Volume 137, Issue 3 391-401 doi: 10.1530/REP-08-0333
Tharasanit T, Colleoni S, Galli C, Colenbrander B, Stout TA.Vitrifying oocytes is a potentially valuable means of preserving the female germ line, but significantly compromises oocyte developmental competence. This study examined the hypothesis that the cumulus complex protects the oocyte during vitrification. Vitrified-warmed immature cumulus oocyte complexes (COCs) were labelled with a plasma membrane impermeant DNA marker (ethidium homodimer-1) to examine the percentage and location of dead cumulus cells, and to investigate the effect of the proportion of dead cells (+1,+2 or +3) on the success of in vitro maturation (IVM). Further, oocytes were lab...
Sharpea azabuensis gen. nov., sp. nov., a Gram-positive, strictly anaerobic bacterium isolated from the faeces of thoroughbred horses.
International journal of systematic and evolutionary microbiology    December 9, 2008   Volume 58, Issue Pt 12 2682-2686 doi: 10.1099/ijs.0.65543-0
Morita H, Shiratori C, Murakami M, Takami H, Toh H, Kato Y, Nakajima F, Takagi M, Akita H, Masaoka T, Hattori M.Four bacterial strains, designated ST18(T), HM244, HM250 and DI49, were isolated from the fresh faeces of four thoroughbred horses in Japan. Cells were Gram-positive, strictly anaerobic, catalase-negative, non-spore-forming, non-motile rods that occurred in chains. They were placed in the same subcluster based on 16S rRNA gene sequence analysis, phenotypic characteristics and levels of DNA-DNA relatedness. Their DNA G+C content ranged from 36 to 38 mol%. Lactobacillus catenaformis, Lactobacillus vitulinus and Catenibacterium mitsuokai belong to cluster XVII of the Clostridium subphylum. Strain...
Development of a mechanically stable support for the osteoinductive biomaterial COLLOSS E.
Journal of tissue engineering and regenerative medicine    December 4, 2008   Volume 3, Issue 2 149-152 doi: 10.1002/term.138
Lode A, Bernhardt A, Kroonen K, Springer M, Briest A, Gelinsky M.The application of bone graft substitutes with osteoinductive properties is of high importance for the repair of large bone defects. COLLOSS E, a protein lyophilizate extracted from equine long bones, exhibits an osteoinductive potential which has been proven in several studies. In this work, a mechanically stable, but biodegradable support for COLLOSS E has been developed aiming at a bone graft substitute that retains shape and size when coming in contact with body fluids. Mineralization of collagen type I, isolated from horse tendon, resulted in a stable collagen hydroxyapatite nanocomposite...
Mitochondrial DNA: an important female contribution to thoroughbred racehorse performance: amendments to nomenclature.
Mitochondrion    December 3, 2008   Volume 9, Issue 1 58-60 doi: 10.1016/j.mito.2008.11.002
Harrison SP, Turrion-Gomez JL.No abstract available
Assessment of the transformation of equine skin-derived fibroblasts to multinucleated skeletal myotubes following lentiviral-induced expression of equine myogenic differentiation 1.
American journal of veterinary research    December 3, 2008   Volume 69, Issue 12 1637-1645 doi: 10.2460/ajvr.69.12.1637
Fernandez-Fuente M, Ames EG, Wagner ML, Zhou H, Strom M, Zammit PS, Mickelson JR, Muntoni F, Brown SC, Piercy RJ.To develop a reliable method for converting cultured equine skin-derived fibroblasts into muscle cells. Methods: Equine skin-derived fibroblasts. Methods: The equine myogenic differentiation 1 (eqMyoD) genomic sequence was obtained by use of equine bacterial artificial chromosome screening and PCR sequencing. Total mRNA was extracted from foal skeletal muscle, and eqMyoD cDNA was cloned into a plasmid vector with an internal ribosomal entry site to express bicistronic eqMyoD or enhanced green fluorescent protein (EGFP). Transient expression was confirmed by immunocytochemical analysis and west...
Polysaccharide storage myopathy phenotype in quarter horse-related breeds is modified by the presence of an RYR1 mutation.
Neuromuscular disorders : NMD    December 3, 2008   Volume 19, Issue 1 37-43 doi: 10.1016/j.nmd.2008.10.001
McCue ME, Valberg SJ, Jackson M, Borgia L, Lucio M, Mickelson JR.In this study we examined a family of Quarter Horses with Polysaccharide Storage Myopathy (PSSM) with a dominant mutation in the skeletal muscle glycogen synthase (GYS1) gene. A subset of horses within this family had a more severe and occasionally fatal PSSM phenotype. The purpose of this study was to identify a modifying gene(s) for the severe clinical phenotype. A genetic association analysis was used to identify RYR1 as a candidate modifying gene. A rare, known equine RYR1 mutation, associated with malignant hyperthermia (MH), was found to segregate in this GYS1 PSSM family. Retrospective ...
Limits to running speed in dogs, horses and humans.
The Journal of experimental biology    December 2, 2008   Volume 211, Issue Pt 24 3836-3849 doi: 10.1242/jeb.024968
Denny MW.Are there absolute limits to the speed at which animals can run? If so, how close are present-day individuals to these limits? I approach these questions by using three statistical models and data from competitive races to estimate maximum running speeds for greyhounds, thoroughbred horses and elite human athletes. In each case, an absolute speed limit is definable, and the current record approaches that predicted maximum. While all such extrapolations must be used cautiously, these data suggest that there are limits to the ability of either natural or artificial selection to produce ever fast...
Genetic parameters for traits evaluated at field tests of 3- and 4-year-old Swedish Warmblood horses.
Animal : an international journal of animal bioscience    December 1, 2008   Volume 2, Issue 12 1832-1841 doi: 10.1017/S1751731108003030
Viklund A, Thorén Hellsten E, Näsholm A, Strandberg E, Philipsson J.There are two types of 1-day field tests available for young Swedish Warmblood sport horses; one test for 3-year olds and one more advanced test for 4-year olds. Conformation, gaits and jumping ability are evaluated at both tests. Studies on various genetic parameters were based on about 20 000 tested horses. The data for 4-year olds consisted of 30 years of testing. The aims of the study were to estimate genetic parameters for results from different time periods, and to estimate heritabilities for, and genetic correlations between, traits scored in the two tests. The judgement of traits was s...
Multiple-trait selection for radiographic health of the limbs, conformation and performance in Warmblood riding horses.
Animal : an international journal of animal bioscience    December 1, 2008   Volume 2, Issue 12 1724-1732 doi: 10.1017/S1751731108003091
Stock KF, Distl O.Information on 26 434 German Warmblood horses born between 1992 and 2001 was used for multivariate genetic analyses of radiographic health, conformation and performance traits to compare different modes of single- and multiple-trait selection of sires. Results of standardized radiological examinations of 5155 Hanoverian Warmblood horses, conformation evaluations from studbook inspections of 20 603 mares, and performance evaluations from mare performance tests and auction horse inspections of 16 098 horses were used for multivariate genetic analyses. Genetic parameters were estimated with restr...
Frequency of the severe combined immunodeficiency disease gene among horses in Morocco.
Equine veterinary journal    November 26, 2008   Volume 40, Issue 6 590-591 doi: 10.2746/042516408x333001
Piro M, Benjouad A, Tligui NS, El Allali K, El Kohen M, Nabich A, Ouragh L.Severe combined immunodeficiency disease (SCID) of horses is an autosomal, recessive hereditary disease occurring among Arabian or crossbred Arabian horses. The genetic defect responsible was previously identified as a 5-base pair deletion in the gene encoding the catalytic subunit of the DNA dependant protein kinase (DNA-PKcs). This study was carried out to determine the frequency of SCID and identify horses carrying the gene for SCID among Arabian and Arabian crossbred stallions and mares in Morocco using a DNA-based test. Twenty-one horses were SCID carriers: 14 (7%) Arabians, 6 (4%) Arab-B...
An abortion of monozygotic twins in a warmblood mare.
Reproduction in domestic animals = Zuchthygiene    November 22, 2008   Volume 44, Issue 5 852-854 doi: 10.1111/j.1439-0531.2008.01112.x
Govaere J, Hoogewijs M, De Schauwer C, Van Zeveren A, Smits K, Cornillie P, de Kruif A.Naturally occurring monozygotic twins are extremely rare in the horse. This paper describes an abortion in a mare after 260 days of pregnancy with monozygotic twins, one a fresh foal and the other a mummified foal.
Preclinical animal models in single site cartilage defect testing: a systematic review.
Osteoarthritis and cartilage    November 21, 2008   Volume 17, Issue 6 705-713 doi: 10.1016/j.joca.2008.11.008
Ahern BJ, Parvizi J, Boston R, Schaer TP.Review the literature for single site cartilage defect research and evaluate the respective strengths and weaknesses of different preclinical animal models. Methods: A literature search for animal models evaluating single site cartilage defects was performed. Variables tabulated and analyzed included animal species, age and number, defect depth and diameter and study duration. Cluster analyses were then used to separate animals with only distal femoral defects into similar groups based on defect dimensions. Representative human studies were included allowing comparison of common clinical lesio...
An infanticide attempt by a free-roaming feral stallion (Equus caballus).
Biology letters    November 21, 2008   Volume 5, Issue 1 23-25 doi: 10.1098/rsbl.2008.0571
Gray ME.Infanticide by adult males occurs in a variety of species. While infanticidal attacks have been documented in several equid species in captivity, it has never been witnessed in free-roaming feral horses. I report an infanticide attempt by a free-living feral stallion on a recently born female foal. The stallion picked up the foal by the shoulders, tossed it around twice and bit in on the neck several times. The dam of the foal charged the stallion and successfully protected her foal from additional attacks. The foal survived the attack and later weaned successfully. The stallion recently took ...
Phenotypic and genotypic characterization of Arcanobacterium haemolyticum isolates from infections of horses.
Journal of clinical microbiology    November 19, 2008   Volume 47, Issue 1 124-128 doi: 10.1128/JCM.01933-08
Hassan AA, Ulbegi-Mohyla H, Kanbar T, Alber J, Lämmler C, Abdulmawjood A, Zschöck M, Weiss R.The present study was designed to characterize phenotypically and genotypically seven Arcanobacterium haemolyticum strains obtained from infections of six horses. All seven strains showed the cultural and biochemical properties typical of A. haemolyticum and were susceptible to most of the antibiotics tested. The species identification could be confirmed by amplification and sequencing of the 16S rRNA gene and the 16S-23S rRNA intergenic spacer region and by PCR amplification of species-specific parts of the gene encoding phospholipase D in A. haemolyticum. Use of the latter could possibly imp...
The involvement of beta-1,4-Galactosyltransferase and N-Acetylglucosamine residues in fertilization has been lost in the horse.
Reproductive biology and endocrinology : RB&E    November 14, 2008   Volume 6 51 doi: 10.1186/1477-7827-6-51
Mugnier S, Boittin S, Douet C, Monget P, Magistrini M, Goudet G.In human and rodents, sperm-zona pellucida binding is mediated by a sperm surface Galactosyltransferase that recognizes N-Acetylglucosamine residues on a glycoprotein ZPC. In large domestic mammals, the role of these molecules remains unclear: in bovine, they are involved in sperm-zona pellucida binding, whereas in porcine, they are not necessary. Our aim was to clarify the role of Galactosyltransferase and N-Acetylglucosamine residues in sperm-zona pellucida binding in ungulates. For this purpose, we analyzed the mechanism of sperm-zona pellucida interaction in a third ungulate: the horse, si...
Assessment of sperm DNA fragmentation in stallion (Equus caballus) and donkey (Equus asinus) using the sperm chromatin dispersion test.
Reproduction in domestic animals = Zuchthygiene    November 13, 2008   Volume 44, Issue 5 823-828 doi: 10.1111/j.1439-0531.2008.01091.x
Cortés-Gutiérrez EI, Crespo F, Serres-Dalmau C, Gutiérrez de las Rozas AL, Dávila-Rodríguez MI, López-Fernández C, Gósalvez J.Sperm DNA fragmentation (sDF) is an important parameter to assessing sperm quality. Information about sperm quality is not available for donkeys, especially in some breeds at risk of extinction. The objectives of this research were to test the four commercial variants of sperm chromatin dispersion test (SCD; sperm Halomax test), originally developed to assess sDF in boars, bulls, rams and stallions, in order to scrutinize their applicability in the study of sDF in a donkey breed at risk of extinction (Zamorano-Leonesa), for which there is no specific test available to analyze sperm at present....
Partial deletion of the LAMA3 gene is responsible for hereditary junctional epidermolysis bullosa in the American Saddlebred Horse.
Animal genetics    November 11, 2008   Volume 40, Issue 1 35-41 doi: 10.1111/j.1365-2052.2008.01795.x
Graves KT, Henney PJ, Ennis RB.Laminin 5 is a heterotrimeric basement membrane protein integral to the structure and function of the dermal-epidermal junction. It consists of three glycoprotein subunits: the alpha3, beta3 and gamma2 chains, which are encoded by the LAMA3, LAMB3 and LAMC2 genes respectively. A mutation in any of these genes results in the condition known as hereditary junctional epidermolysis bullosa (JEB). A 6589-bp deletion spanning exons 24-27 was found in the LAMA3 gene in American Saddlebred foals born with the skin-blistering condition epitheliogenesis imperfecta. The deletion confirms that this autoso...
RNA interference protects horse cells in vitro from infection with Equine Arteritis Virus.
Antiviral research    November 11, 2008   Volume 81, Issue 3 209-216 doi: 10.1016/j.antiviral.2008.10.004
Heinrich A, Riethmüller D, Gloger M, Schusser GF, Giese M, Ulbert S.Equine Arteritis Virus (EAV) belongs to the Arteriviridae and causes viral arteritis in horses. In an attempt to develop novel and save therapies against the infection it was tested whether EAV is susceptible to RNA interference (RNAi) in an equine in vitro system. Horse cells were transfected with chemically synthesized small interfering RNA oligonucleotides (siRNAs) and challenged with EAV. Application of these siRNAs led to a significant protection of the cells, and virus titers decreased drastically. siRNAs derived from DNA plasmids expressing small hairpin RNAs (shRNAs) were also effectiv...
Molecular phylogeny of equine herpesvirus 1 isolates from onager, zebra and Thomson’s gazelle.
Archives of virology    November 11, 2008   Volume 153, Issue 12 2297-2302 doi: 10.1007/s00705-008-0247-y
Ghanem YM, Fukushi H, Ibrahim ES, Ohya K, Yamaguchi T, Kennedy M.Viruses related to equine herpesvirus type 1 (EHV-1) were isolated from an aborted fetus of an onager (Equus hemionus) in 1984, an aborted fetus of Grevy's zebra (Equus grevyi) in 1984 and a Thomson's gazelle (Gazella thomsoni) with nonsuppurative encephalitis in 1996, all in the USA. The mother of the onager fetus and the gazelle were kept near plains zebras (Equus burchelli). In phylogenetic trees based on the nucleotide sequences of the genes for glycoproteins B (gB), I (gI), and E (gE), and teguments including ORF8 (UL51), ORF15 (UL45), and ORF68 (US2), the onager, Grevy's zebra and gazell...
Leukocyte-derived and endogenous matrix metalloproteinases in the lamellae of horses with naturally acquired and experimentally induced laminitis.
Veterinary immunology and immunopathology    November 7, 2008   Volume 129, Issue 3-4 221-230 doi: 10.1016/j.vetimm.2008.11.003
Loftus JP, Johnson PJ, Belknap JK, Pettigrew A, Black SJ.Inflammation and dysregulation of endogenous matrix metalloproteinase (MMP) production are implicated in the development of equine laminitis. In this study, we examine quantitative relationships among levels of leukocyte-derived proMMP-9 and MMP-9, lamellar proMMP-2 and MMP-2, and expression of proMMP-2 processing enzymes, MT1-MMP/PACE4, as steps towards determining whether inflammation and dysregulation of endogenous MMP production are independent or co-dependent processes. Methods: Archived samples of lamellae from horses with naturally acquired laminitis (n = 12), and from horses administer...
Genetic characterization and polymorphisms for parentage testing of the Jeju horse using 20 microsatellite loci.
The Journal of veterinary medical science    November 5, 2008   Volume 70, Issue 10 1111-1115 doi: 10.1292/jvms.70.1111
Choi SK, Cho CY, Yeon SH, Cho BW, Cho GJ.Genetic characterization of the Jeju horse (JH) was performed to construct a correct pedigree of the JH family. A total of 111 horses including 79 JH were genotyped using 20 microsatellite loci. The number of alleles varied from 5 to 11 (mean 7.45) in the JH. The observed heterozygosity and expected heterozygosity ranged from 0.293 to 0.891 and from 0.357 to 0.841, respectively. The polymorphic information contents (PIC) ranged from 0.335 to 0.816. AHT4, ASB2, ASB17, ASB23, CA425, HMS2, HMS3, HTG10, LEX3 and VHL20 loci had relatively high PIC values (> 0.7). The total exclusion probability ...
Spermatozoa morphology during the breeding season in Thoroughbred stallions in Japan.
The Journal of veterinary medical science    November 5, 2008   Volume 70, Issue 10 1121-1124 doi: 10.1292/jvms.70.1121
Koyago M, Nakada K, Tsunoda N, Moriyoshi M, Sawamukai Y.The morphology of spermatozoa of modern Thoroughbred stallions in Japan was investigated during the breeding season. A total of 299 semen samples were collected from the penises of 16 stallions immediately after service. The rate of abnormalities in sperm heads and tails, spermatozoa with cytoplasmic droplets and slides with medusa cells to total observed slides in each stallion were 3.9 +/- 2.1%, 11.5 +/- 5.9%, 2.4 +/- 2.6% and 20.1%, respectively. The values for the area, length, width and aspect ratio of the stallion sperm head were 12.54 +/- 1.34 microm(2), 5.93 +/- 0.40 microm, 2.69 +/- 0...
Associations of sex, breed, and age with cervical vertebral compressive myelopathy in horses: 811 cases (1974-2007).
Journal of the American Veterinary Medical Association    November 5, 2008   Volume 233, Issue 9 1453-1458 doi: 10.2460/javma.233.9.1453
Levine JM, Ngheim PP, Levine GJ, Cohen ND.To determine sex, breed, and age distributions in a population of horses with cervical vertebral compressive myelopathy (CVCM), compared with contemporaneous control horses. Methods: Retrospective case-control study. Methods: 811 horses with CVCM and 805 control horses. Methods: The Veterinary Medical Database was searched to identify horses with CVCM and contemporaneous control horses registered between July 1974 and August 2007. Admission date, admitting institution, sex, breed, age at the time of registration in the database, weight, and discharge status (alive, died, or euthanized) were re...
Antimicrobial resistance in companion animals.
Animal health research reviews    November 5, 2008   Volume 9, Issue 2 169-176 doi: 10.1017/S1466252308001485
Scott Weese J.Antimicrobial resistance (AMR) is an emerging problem in companion animals, because of difficult-to-treat infections, possible pressure to use antimicrobials that are important in human medicine, and potential zoonotic transmission. The extent and importance of AMR in companion animals are poorly understood, in part because of limited surveillance; however, it is clear that resistance is problematic in many pathogens and commensals, including staphylococci, enterococci, Escherichia coli and Salmonella.
In vitro analysis of expression vectors for DNA vaccination of horses: the effect of a Kozak sequence.
Acta veterinaria Scandinavica    November 4, 2008   Volume 50, Issue 1 44 doi: 10.1186/1751-0147-50-44
Olafsdóttir G, Svansson V, Ingvarsson S, Marti E, Torsteinsdóttir S.One of the prerequisite for developing DNA vaccines for horses are vectors that are efficiently expressed in horse cells. We have analysed the ectopic expression of the human serum albumin gene in primary horse cells from different tissues. The vectors used are of pcDNA and pUC origin and include the cytomegalovirus (CMV) promoter. The pUC vectors contain CMV intron A whereas the pcDNA vectors do not. Insertion of intron A diminished the expression from the pcDNA vectors whereas insertion of a Kozak sequence upstream of the gene in two types of pUC vectors increased significantly the in vitro ...
Elimination profiles of flurbiprofen and its metabolites in equine urine for doping analysis.
Talanta    October 31, 2008   Volume 55, Issue 6 1173-1180 doi: 10.1016/s0039-9140(01)00545-8
Tsitsimpikou C, Spyridaki MH, Georgoulakis I, Kouretas D, Konstantinidou M, Georgakopoulos CG.Flurbiprofen and its main acidic metabolites were detected in equine urine after a single-dose administration of 500 mg flurbiprofen to two 2.5-3.5-years-old mares, in order to be used in equine doping control routine analysis. The urine levels of the parent drug were determined using GC/MS. Five acidic metabolites were found in the urine. The structure of the proposed metabolites was confirmed by HRMS accurate mass measurements. The highest flurbiprofen concentration was 204 mug ml(-1) at 1-3 h post administration. Flurbiprofen could be detected for 24-37 h in urine using the standard screeni...
Riding ‘white’ horses reveals new insights into pigmentation and melanoma.
Pigment cell & melanoma research    October 30, 2008   Volume 21, Issue 6 596-597 doi: 10.1111/j.1755-148X.2008.00515.x
Norris BJ.No abstract available
[Toward exploration of morphological disparity of measurable traits of mammalian skull. 1. Interrelation between different forms of group variation].
Zhurnal obshchei biologii    October 30, 2008   Volume 69, Issue 5 344-354 
Pavlinov IIa, Nanova OG, Spasskaia NN.Interrelations between some forms of group variation (FGVs) (age, sex, geographic, inter-species, differences among breeds) of 12 to 15 measurable skull traits are studied in 6 mammal species (pine marten, polar fox, Przewalskii horse, and 3 jird species) by means of dispersion analysis (model III, MANOVA). The above FGVs are considered as factors in the MANOVA, and skull traits are considered as dependent variables. To obtaine commeasurables estimates for the FGVs, each of them is assessed numerically as a portion of its dispersion in the entire morphological disparity defined for each charac...
Glial cells missing homologue 1 is induced in differentiating equine chorionic girdle trophoblast cells.
Biology of reproduction    October 29, 2008   Volume 80, Issue 2 227-234 doi: 10.1095/biolreprod.108.070920
de Mestre AM, Miller D, Roberson MS, Liford J, Chizmar LC, McLaughlin KE, Antczak DF.The objective of this study was to identify transcription factors associated with differentiation of the chorionic girdle, the invasive form of equine trophoblast. The expression patterns of five transcription factors were determined on a panel of conceptus tissues from early horse pregnancy. Tissues from Days 15 through 46 were tested. Eomesodermin (EOMES), glial cells missing homologue 1 (GCM1), heart and neural crest derivatives expressed transcript 1 (HAND1), caudal type homeobox 2 (CDX2), and distal-less homeobox 3 (DLX3) were detected in horse trophoblast, but the expression patterns for...