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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Analysis of proglycogen and macroglycogen content in muscle biopsy specimens obtained from horses.
American journal of veterinary research    April 10, 2002   Volume 63, Issue 4 570-575 doi: 10.2460/ajvr.2002.63.570
Bröjer JT, Stämpfli HR, Graham TE.To determine proglycogen (PG) and macroglycogen (MG) content in equine skeletal muscle and to compare 2 analytical methods (acid hydrolysis [AC] and PG plus MG determination) for measurement of total muscle glycogen content (Gly(tot)) in biopsy specimens. Methods: Muscle biopsy specimens obtained from 41 clinically normal horses. Methods: Forty-five muscle biopsy specimens obtained from the middle gluteal (n = 31) or triceps (14) muscle were analyzed, using AC and MG plus PG determination for Gly(tot). Variability within muscle biopsy specimens for each method was calculated from duplicate ana...
Arcanobacterium hippocoleae sp. nov., from the vagina of a horse.
International journal of systematic and evolutionary microbiology    April 5, 2002   Volume 52, Issue Pt 2 617-619 doi: 10.1099/00207713-52-2-617
Hoyles L, Falsen E, Foster G, Rogerson F, Collins MD.A polyphasic taxonomic study was performed on a previously unidentified gram-positive, facultatively anaerobic, diphtheroid-shaped organism isolated from a vaginal discharge of a horse. Comparative 16S rRNA gene sequencing demonstrated that the strain was a member of the genus Arcanobacterium, but sequence divergence values of >4% with described species of this genus (viz: Arcanobacterium haemolyticum, Arcanobacterium bernardiae, Arcanobacterium phocae, Arcanobacterium pluranimalium and Arcanobacterium pyogenes) demonstrated that the isolate represented a novel species. The unknown bacteriu...
Genetic analysis of Group A rotaviruses: evidence for interspecies transmission of rotavirus genes.
Virus genes    April 4, 2002   Volume 24, Issue 1 11-20 doi: 10.1023/a:1014073618253
Palombo EA.Rotaviruses are the major cause of severe gastroenteritis in young children and animals. The rotavirus genome is composed of eleven segments of double-stranded RNA and can undergo genetic reassortment during mixed infections, leading to progeny viruses with novel or atypical phenotypes. There are numerous descriptions of rotavirus strains isolated from human and animals that share genetic and antigenic features of viruses from heterologous species. In many cases, genetic analysis by hybridization has clearly demonstrated the genetic relatedness of gene segments to those from viruses isolated f...
Apparent resistance of Parascaris equorum to macrocylic lactones.
The Veterinary record    April 2, 2002   Volume 150, Issue 9 279-281 doi: 10.1136/vr.150.9.279
Boersema JH, Eysker M, Nas JW.No abstract available
Equine abortion associated with the Borrelia parkeri-B. turicatae tick-borne relapsing fever spirochete group.
Journal of clinical microbiology    March 30, 2002   Volume 40, Issue 4 1558-1562 doi: 10.1128/JCM.40.4.1558-1562.2002
Walker RL, Read DH, Hayes DC, Nordhausen RW.Direct amplification and sequencing of the 16S rRNA gene and a variable region of the flagellin gene from fetal liver-associated spirochetes belonging to the Borrelia parkeri-B. turicatae tick-borne relapsing fever spirochete group with a late-term abortion in a mare are described.
Comparative evaluation of nuclear morphology of equine oocytes aspirated in vivo and stained with Hoechst and orcein.
Cells, tissues, organs    March 29, 2002   Volume 170, Issue 4 228-236 doi: 10.1159/000047926
Bézard J, Bøgh IB, Duchamp G, Hyttel P, Greve T.Nuclear maturation of equine oocytes was assessed immediately after in vivo collection. A double-staining technique (Hoechst and orcein) was used on the same oocytes to visualize nuclear morphology, i.e. to evaluate the chromatin configurations of each oocyte after Hoechst in relation to the nuclear morphology after orcein staining. The proportion of oocytes evaluated as germinal vesicle stages was significantly (p < 0.02) lower after Hoechst (14.5%) than after orcein staining (29.0%), while the incidence of the so-called dense chromatin stage was assessed to be higher (p < 0.05) after H...
Cloning of the genomes of equine herpesvirus type 1 (EHV-1) strains KyA and racL11 as bacterial artificial chromosomes (BAC).
Journal of veterinary medicine. B, Infectious diseases and veterinary public health    March 26, 2002   Volume 49, Issue 1 31-36 doi: 10.1046/j.1439-0450.2002.00534.x
Rudolph J, O'Callaghan DJ, Osterrieder N.The genome of equine herpesvirus type 1 (EHV-1) strain RacL11, a highly virulent isolate obtained from an aborted foal, and that of the modified live vaccine strain KyA, were cloned as bacterial artificial chromosomes (BAC) in Eseherichia coli. Mini F plasmid sequences were inserted into the viral genomes by homologous recombination instead of the gene 71 (EUS4) open reading frame after co-transfection of viral DNA and recombinant plasmid pdelta71-pHA2 into RK13 cells. After isolation of recombinant viruses by three rounds of plaque purification, viral DNA was isolated from RK13 cells infected...
The parallel helices of the intermediate filaments of alpha-keratin.
International journal of biological macromolecules    March 26, 2002   Volume 30, Issue 2 95-96 doi: 10.1016/s0141-8130(02)00005-3
Feughelman M, Lyman DJ, Willis BK.Recent Fourier transform infrared spectroscopy (FTIR) with attenuated total reflection technique (ATR) has been applied to alpha-keratin fibers (horse-hair) extended in water both at 21 and 95 degrees C. Infrared absorption bands in the Amide 1 region indicated that at extensions to 40-50% strain in water at 21 degrees C alpha-helices had completely disappeared and parallel beta-sheets were formed [Appl. Spectrosc. 55 (2001) 552]. However, when the hair fibers were extended to the same strain at 95 degrees C in water the result was the formation of anti-parallel beta-sheets. These results sugg...
Changes in concentrations of follicular fluid factors during follicle selection in mares.
Biology of reproduction    March 22, 2002   Volume 66, Issue 4 1111-1118 doi: 10.1095/biolreprod66.4.1111
Donadeu FX, Ginther OJ.The temporal relationships in the changes in concentrations of follicular fluid factors during follicle selection were characterized in mares. All follicles > or =5 mm were ablated 10 days after ovulation, followed by follicular fluid collection from the three largest follicles (F1, F2, and F3) when F1 of the new wave reached a diameter of 8.0-11.9, 12.0-15.9, 16.0-19.9, 20.0-23.9, 24.0-27.9, or 28.0-31.9 mm (n = 4-8 mares/range). Diameter deviation between F1 and F2 began during the 20.0- to 23.9-mm range, as indicated by a greater difference in diameter between the two follicles at the 24...
Lipopeptide stimulation of MHC class I-restricted memory cytotoxic T lymphocytes from equine infectious anemia virus-infected horses.
Vaccine    March 22, 2002   Volume 20, Issue 13-14 1809-1819 doi: 10.1016/s0264-410x(01)00517-5
Ridgely SL, McGuire TC.The immunogenicity of equine infectious anemia virus (EIAV) Gag and Env equine leukocyte alloantigen (ELA)-A5.1, -A9, and -A1 restricted cytotoxic T lymphocyte (CTL) epitopes synthesized on multiple antigenic peptide (MAP) system coupled to tripalmitoyl-S-glycerylcysteine (P3C) was evaluated in vitro. P3C-MAP-peptide-stimulated peripheral blood mononuclear cells (PBMCs) from horses, chronically infected with EIAV, had memory CTL (CTLm) similar to that of PBMCs stimulated with either the minimal CTL epitopes, longer peptides containing the CTL epitopes, or EIAV. The stimulated CTL lysed EIAV-in...
Hysteroscopic insemination of mares with low numbers of nonsorted or flow sorted spermatozoa.
Equine veterinary journal    March 22, 2002   Volume 34, Issue 2 128-132 doi: 10.2746/042516402776767178
Lindsey AC, Morris LH, Allen WR, Schenk JL, Squires EL, Bruemmer JE.The objectives of this study were 1) to compare pregnancy rates resulting from 2 methods of insemination using low sperm numbers and 2) to compare pregnancy rates resulting from hysteroscopic insemination of 5 x 106 nonsorted and 5 x 106 spermatozoa sorted for X- and Y-chromosome-bearing populations (flow sorted). Semen was collected with an artificial vagina from 2 stallions of known acceptable fertility. Oestrus was synchronised (June to July) in 40 mares, age 3-10 years, by administering 10 ml altrenogest orally for 10 consecutive days, followed by 250 microg cloprostenol i.m. on Day 11. Al...
Foals of desired sex–and with minimal sperm numbers.
Equine veterinary journal    March 21, 2002   Volume 34, Issue 2 106-107 doi: 10.2746/042516402776767132
Katila T.No abstract available
Equine clinical cytogenetics–human chromosomes sitting on horse chromosomes.
Equine veterinary journal    March 21, 2002   Volume 34, Issue 2 110-111 doi: 10.2746/042516402776767141
Breen M.No abstract available
Detection of high circulating concentrations of inhibin pro- and -alphaC immunoreactivity in mares with granulosa-theca cell tumours.
Equine veterinary journal    March 21, 2002   Volume 34, Issue 2 203-206 doi: 10.2746/042516402776767196
Watson ED, Heald M, Leask R, Groome NP, Riley SC.No abstract available
Use of zoo-FISH to characterise a reciprocal translocation in a thoroughbred mare: t(1;1 6)(q16;q21.3).
Equine veterinary journal    March 21, 2002   Volume 34, Issue 2 207-209 doi: 10.2746/042516402776767295
Lear TL, Layton G.No abstract available
High expression in adult horse of PLRP2 displaying a low phospholipase activity.
Biochimica et biophysica acta    March 21, 2002   Volume 1594, Issue 2 255-265 doi: 10.1016/s0167-4838(01)00309-0
Jayne S, Kerfelec B, Foglizzo E, Chapus C, Crenon I.The physiological role of the two lipase-related proteins, PLRP1 and PLRP2, still remains obscure although some propositions have been made concerning PLRP2. In this paper, we report the presence of high amounts of PLRP2 in adult horse pancreas whereas no PLRP1 could be detected. As well, a non-parallel expression of PLRP2 and PLRP1 is observed in adult cat and dog, since no PLRP2 could be detected in these two species. In adult ox, neither PLRP2 nor PLRP1 could be found. These findings are in favor of a different regulation of the expression of the genes encoding pancreatic lipase and the rel...
[Successful direct transfer of a deep frozen-thawed equine embryo].
DTW. Deutsche tierarztliche Wochenschrift    March 14, 2002   Volume 109, Issue 2 61-62 
Ulrich P, Nowshari MA.Embryos were flushed on day 7 after ovulation from two mares, and frozen using a conventional slow freezing procedure in phosphate buffered (PBS) saline supplemented with 10% FCS, 1.5 mol/L ethylene glycol and 0.25 mol/L sucrose. One of the two embryos was thawed after 10 months of storage in liquid nitrogen and transferred directly (without dilution of the cryoprotectant and quality examination) to a synchronized recipient. This transfer resulted in the birth of a live female foal. To our knowledge, this is the first live foal born after direct transfer of a frozen-thawed equine embryo.
Construction of a 5000(rad) whole-genome radiation hybrid panel in the horse and generation of a comprehensive and comparative map for ECA11.
Mammalian genome : official journal of the International Mammalian Genome Society    March 13, 2002   Volume 13, Issue 2 89-94 doi: 10.1007/s00335-001-2089-8
Chowdhary BP, Raudsepp T, Honeycutt D, Owens EK, Piumi F, Guérin G, Matise TC, Kata SR, Womack JE, Skow LC.A 5000(rad) whole-genome radiation hybrid (RH) panel was created for the horse. The usefulness of the panel for generating physically ordered maps of individual equine chromosomes was tested by typing 24 markers on horse Chromosome 11 (ECA11). The overall retention of markers on this chromosome was 43.6%. Almost complete retention of two of the typed markers--- CA062 and AHT44---clearly indicated the location of thymidine kinase gene on the short arm of ECA11. Seven of the typed markers were FISH mapped to align the RH and cytogenetic maps. With the RH-MAPPER approach, a physically ordered map...
Influence of equine herpesvirus type 2 infection on monocyte chemoattractant protein 1 gene transcription in equine blood mononuclear cells.
Research in veterinary science    March 9, 2002   Volume 71, Issue 2 111-113 doi: 10.1053/rvsc.2001.0493
Dunowska M, Meers J, Johnson RD, Wilks CR.Representational difference analysis (RDA) was used to compare gene expression in equine mononuclear cells either infected with equine herpesvirus-2 (EHV-2) or adsorbed with inactivated EHV-2. Seven clones identified in non-infected cells after three rounds of selective subtraction and enrichment for differentially expressed genes contained sequences homologous to equine monocyte chemoattractant protein 1 (MCP-1). This suggested that EHV-2 may down-regulate MCP-1 transcription in infected cells. These findings correlate well with similar findings described for human cytomegalovirus and support...
Functional expression and membrane fusion tropism of the envelope glycoproteins of Hendra virus.
Virology    March 9, 2002   Volume 290, Issue 1 121-135 doi: 10.1006/viro.2001.1158
Bossart KN, Wang LF, Eaton BT, Broder CC.Hendra virus (HeV) is an emerging paramyxovirus first isolated from cases of severe respiratory disease that fatally affected both horses and humans. Understanding the mechanisms of host cell infection and cross-species transmission is an important step in addressing the risk posed by such emerging pathogens. We have initiated studies to characterize the biological properties of the HeV envelope glycoproteins. Recombinant vaccinia viruses encoding the HeV F and G open reading frames were generated and glycoprotein expression was verified by metabolic labeling and detection using specific antis...
A cytochrome c mutant with high electron transfer and antioxidant activities but devoid of apoptogenic effect.
The Biochemical journal    March 7, 2002   Volume 362, Issue Pt 3 749-754 doi: 10.1042/0264-6021:3620749
Abdullaev ZKh, Bodrova ME, Chernyak BV, Dolgikh DA, Kluck RM, Pereverzev MO, Arseniev AS, Efremov RG, Kirpichnikov MP, Mokhova EN, Newmeyer DD....A cytochrome c mutant lacking apoptogenic function but competent in electron transfer and antioxidant activities has been constructed. To this end, mutant species of horse and yeast cytochromes c with substitutions in the N-terminal alpha-helix or position 72 were obtained. It was found that yeast cytochrome c was much less effective than the horse protein in activating respiration of rat liver mitoplasts deficient in endogenous cytochrome c as well as in inhibition of H(2)O(2) production by the initial segment of the respiratory chain of intact rat heart mitochondria. The major role in the di...
Characterization of the H- and L-subunit ratios of ferritins by sodium dodecyl sulfate-capillary gel electrophoresis.
Analytical biochemistry    March 7, 2002   Volume 302, Issue 2 263-268 doi: 10.1006/abio.2001.5561
Grady JK, Zang J, Laue TM, Arosio P, Chasteen ND.Sodium dodecyl sulfate-capillary gel electrophoresis (SDS-CGE) was used to characterize the H- and L-subunit ratios of several mammalian ferritins and one bacterioferritin. Traditionally, SDS-PAGE has been used to characterize the H- and L-subunit ratios in ferritin; however, this technique is relatively slow and requires staining, destaining, and scanning before the data can be processed. In addition, the H- and L-subunits of ferritin are fairly close in molecular weight (approximately 21,000 and approximately 20,000, respectively) and are often difficult to resolve in SDS-PAGE slab gels. In ...
Isolation and characterization of two European strains of Ehrlichia phagocytophila of equine origin.
Clinical and diagnostic laboratory immunology    March 5, 2002   Volume 9, Issue 2 341-343 doi: 10.1128/cdli.9.2.341-343.2002
Bjöersdorff A, Bagert B, Massung RF, Gusa A, Eliasson I.We report the isolation and partial genetic characterization of two equine strains of granulocytic Ehrlichia of the genogroup Ehrlichia phagocytophila. Frozen whole-blood samples from two Swedish horses with laboratory-verified granulocytic ehrlichiosis were inoculated into HL-60 cell cultures. Granulocytic Ehrlichia was isolated and propagated from both horses. DNA extracts from the respective strains were amplified by PCR using primers directed towards the 16S rRNA gene, the groESL heat shock operon gene, and the ank gene. The amplified gene fragments were sequenced and compared to known seq...
Detection of lipid peroxidation in equine spermatozoa based upon the lipophilic fluorescent dye C1l-BODIPY581/591.
Journal of andrology    March 1, 2002   Volume 23, Issue 2 259-269 
Ball BA, Vo A.The lipophilic fluorescent probe, 4,4-difluoro-5-(4-phenyl-1 ,3-butadienyl)-4-bora-3a,4a-diaza-s-indacene-3-undecanoic acid (C11-BODIPY581/591) was used to evaluate changes in lipid peroxidation in equine spermatozoa during both short-term exposure to ferrous sulfate and sodium ascorbate in the presence of cumene hydroperoxide as well as during storage of spermatozoa at 5 degrees C for 48 hours. Peroxidation of C11-BODIPY581/591 was accompanied by a shift in fluorescence from red to green, and the relative amount of nonoxidized probe was determined as the ratio of red:(red + green) fluorescenc...
Looking for the pony in the HERS data. Heart and Estrogen/progestin Replacement Study.
Circulation    February 28, 2002   Volume 105, Issue 8 902-903 
Barrett-Connor E.No abstract available
DNA-PKcs mutations in dogs and horses: allele frequency and association with neoplasia.
Gene    February 28, 2002   Volume 283, Issue 1-2 263-269 doi: 10.1016/s0378-1119(01)00880-0
Ding Q, Bramble L, Yuzbasiyan-Gurkan V, Bell T, Meek K.Previously, spontaneous genetic immunodeficiencies in mice, Arabian foals, and recently in Jack Russell terriers have been ascribed to defects in DNA-PKcs (catalytic subunit of the DNA dependent protein kinase) expression. In severe combined immunodeficiency (SCID) foals, a 5 bp deletion at codon 9480 results in a frameshift and a 967 amino acid deletion from the C terminus (including the entire PI3 kinase domain) and an unstable mutant protein. In SCID mice, a single base pair mutation results in a premature stop codon and deletion of 83 amino acids; as in SCID foals, the mutant protein is un...
Equine infectious anemia virus and the ubiquitin-proteasome system.
Journal of virology    February 28, 2002   Volume 76, Issue 6 3038-3044 doi: 10.1128/jvi.76.6.3038-3044.2002
Ott DE, Coren LV, Sowder RC, Adams J, Nagashima K, Schubert U.Some retroviruses contain monoubiquitinated Gag and do not bud efficiently from cells treated with proteasome inhibitors, suggesting an interaction between the ubiquitin-proteasome system and retrovirus assembly. We examined equine infectious anemia virus (EIAV) particles and found that approximately 2% of the p9(Gag) proteins are monoubiquitinated, demonstrating that this Gag protein interacts with an ubiquitinating activity. Different types of proteasome inhibitors were used to determine if proteasome inactivation affects EIAV release from chronically infected cells. Pulse-chase immunoprecip...
Recombinant equine interleukin-1beta induces putative mediators of articular cartilage degradation in equine chondrocytes.
Canadian journal of veterinary research = Revue canadienne de recherche veterinaire    February 23, 2002   Volume 66, Issue 1 19-25 
Tung JT, Fenton JI, Arnold C, Alexander L, Yuzbasiyan-Gurkan V, Venta PJ, Peters TL, Orth MW, Richardson DW, Caron JP.Interleukin-1 is considered a central mediator of cartilage loss in osteoarthritis in several species, however an equine recombinant form of this cytokine is not readily available for in vitro use in equine osteoarthritis research. Equine recombinant interleukin-1beta was cloned and expressed and its effects on the expression and activity of selected chondrocytic proteins implicated in cartilage matrix degradation were characterized. Reverse transcriptase polymerase chain reaction methods were used to amplify the entire coding region of the equine IL-1beta mRNA, which was cloned into an expres...
Nasal mucosal immunogenicity for the horse of a SeM peptide of Streptococcus equi genetically coupled to cholera toxin.
Vaccine    February 23, 2002   Volume 20, Issue 11-12 1653-1659 doi: 10.1016/s0264-410x(01)00488-1
Sheoran AS, Artiushin S, Timoney JF.The intranasal immunogenicity of cholera toxin (CT) genetically coupled to peptide sequence aa236-334 (F3) of the SeM protein of Streptococcus equi was studied in five young adult Welsh ponies. All ponies made rapid CTB- and SeMF3-specific serum antibody responses following the first immunization. Specific nasal IgA responses were detected in two ponies 14 days after the first immunization, in another two 14 days after a second immunization on day 14, and in all ponies 28 days after a third immunization on day 42. SeMF3-specific antibody responses in sera and nasal washes were dominated by IgG...
Comparative FISH mapping of 32 loci reveals new homologous regions between donkey and horse karyotypes.
Cytogenetics and cell genetics    February 22, 2002   Volume 94, Issue 3-4 180-185 doi: 10.1159/000048812
Raudsepp T, Mariat D, Guérin G, Chowdhary BP.A total of 32 loci comprising specific genes, microsatellites and anonymous BAC clones from horse and cattle were mapped on donkey chromosomes. Of these, 13 markers were also mapped for the first time in the horse. This information, together with that previously available in donkey and horse updates the comparative status of the karyotypes of the two species. The findings of the present study for the first time show correlation between eleven equine acrocentric autosomes and the donkey chromosomes and in part enable detection of rearrangements between them. There are still 7-8 pairs of chromos...