Analyze Diet

Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
Equine enterocytes actively oxidize l-glutamine, but do not synthesize l-citrulline or l-arginine from l-glutamine or l-proline in vitro.
Journal of animal science    March 12, 2022   Volume 100, Issue 4 skac077 doi: 10.1093/jas/skac077
Martinez RE, Leatherwood JL, Bradbery AN, Silvers BL, Fridley J, Arnold CE, Posey EA, He W, Bazer FW, Wu G.In livestock species, the enterocytes of the small intestine are responsible for the synthesis of citrulline and arginine from glutamine and proline. At present, little is known about de novo synthesis of citrulline and arginine in horses. To test the hypothesis that horses of different age groups can utilize glutamine and proline for the de novo synthesis of citrulline and arginine, jejunal enterocytes from 19 horses of three different age groups: neonates (n = 4; 7.54 ± 2.36 d of age), adults (n = 9; 6.4 ± 0.35 yr), and aged (n = 6; 22.9 ± 1.0 yr) with healthy gastrointestinal tracts were...
Genome-wide association study for frozen-thawed sperm motility in stallions across various horse breeds.
Animal bioscience    March 3, 2022   Volume 35, Issue 12 1827-1838 doi: 10.5713/ab.21.0504
Nikitkina EV, Dementieva NV, Shcherbakov YS, Atroshchenko MM, Kudinov AA, Samoylov OI, Pozovnikova MV, Dysin AP, Krutikova AA, Musidray AA....The semen quality of stallions including sperm motility is an important target of selection as it has a high level of individual variability. However, effects of the molecular architecture of the genome on the mechanisms of sperm formation and their preservation after thawing have been poorly investigated. Here, we conducted a genome-wide association study (GWAS) for the sperm motility of cryopreserved semen in stallions of various breeds. Methods: Semen samples were collected from the stallions of 23 horse breeds. The following semen characteristics were examined: progressive motility (PM), p...
146 Transcriptome characterisation of equine oocyte maturation.
Reproduction, fertility, and development    March 2, 2022   Volume 34, Issue 2 311 doi: 10.1071/RDv34n2Ab146
de la Fuente A, Scoggin C, Bradecamp E, Ali H, Troedsson M, Meyers S, Dini P.No abstract available
57 Influence of donor mare age on pre- and postimplanation embryo development within an equine ovum pick-up-intracytoplasmic sperm injection-embryo transfer (OPU-ICSI-ET) program over a three-year period.
Reproduction, fertility, and development    March 2, 2022   Volume 34, Issue 2 264 doi: 10.1071/RDv34n2Ab57
Lazzari G, Colleoni S, Barandalla M, Benedetti M, Duchi R, Galli C.No abstract available
A genome-wide association study of mare fertility in the Pura Raza Español horse.
Animal : an international journal of animal bioscience    March 2, 2022   Volume 16, Issue 3 100476 doi: 10.1016/j.animal.2022.100476
Laseca N, Demyda-Peyrás S, Valera M, Ramón M, Escribano B, Perdomo-González DI, Molina A.Despite the economic importance of fertility for the horse industry, few efforts have been made to achieve a better understanding of the genetic mechanisms underlying its control. This is probably due to the difficulty of obtaining reliable phenotypes and the complexity of modelling the environmental and management factors. This work is novel in that we propose to use reproductive efficiency (RE) as an indicator of mare fertility. To achieve this, we performed a genome-wide association study in the Pura Raza Español horse aimed at identifying genomic variants, regions, and candidate genes ass...
52 Equine embryo size does matter!
Reproduction, fertility, and development    March 2, 2022   Volume 34, Issue 2 261 doi: 10.1071/RDv34n2Ab52
Derisoud E, Jouneau L, Margat A, Gourtay C, Dubois C, Archilla C, Jaszczyszyn Y, Dahirel M, Daniel N, Peynot N, Briot L, De Geoffroy F, Wimel L....No abstract available
93 Zeta potential of equine sperm and its association with sperm quality.
Reproduction, fertility, and development    March 2, 2022   Volume 34, Issue 2 283-284 doi: 10.1071/RDv34n2Ab93
Orsolini MF, Verstraete MH, van Heule M, Orellana D, Ortega A, Meyers S, Dini P.No abstract available
73 Preimplantation genetic diagnosis of glycogen branching enzyme deficiency and sex determination in equine in vitro-produced embryos.
Reproduction, fertility, and development    March 2, 2022   Volume 34, Issue 2 272-273 doi: 10.1071/RDv34n2Ab73
Barandalla M, Colleoni S, Duchi R, Benedetti M, Perota A, Galli C, Lazzari G.No abstract available
Female age and parity in horses: how and why does it matter?
Reproduction, fertility, and development    March 2, 2022   Volume 34, Issue 2 52-116 doi: 10.1071/RD21267
Derisoud E, Auclair-Ronzaud J, Palmer E, Robles M, Chavatte-Palmer P.Although puberty can occur as early as 14-15months of age, depending on breed and use, the reproductive career of mares may continue to advanced ages. Once mares are used as broodmares, they will usually produce foals once a year until they become unfertile, and their productivity can be enhanced and/or prolonged through embryo technologies. There is a general consensus that old mares are less fertile, but maternal age and parity are confounding factors because nulliparous mares are usually younger and older mares are multiparous in most studies. This review shows that age critically affects c...
Genetic diversity and population structure of Mongolian regional horses with 14 microsatellite markers.
Animal bioscience    March 2, 2022   Volume 35, Issue 8 1121-1128 doi: 10.5713/ab.21.0497
Yun J, Oyungerel B, Kong HS.This study aimed to identify the genetic diversity and population structure of Mongolian horse populations according to the province of residence (Khentii, KTP; Uvs, USP; Omnogovi and Dundgovi, GOP; Khovsgol, KGP) using 14 microsatellite (MS) markers. Methods: A total of 269 whole blood samples were obtained from the four populations (KTP, USP, GOP, KGP) geographically distinct provinces. Multiplex polymerase chain reaction (PCR) was conducted using 14 MS markers (AHT4, ASB2, ASB17, ASB23, CA425, HMS1, HMS2, HMS3, HMS6, HMS7, HTG4, HTG6, HTG7, and VHL20), as recommended by the International So...
Outbreak of neuropathogenic equid herpesvirus 1 causing abortions in Yili horses of Zhaosu, North Xinjiang, China.
BMC veterinary research    March 1, 2022   Volume 18, Issue 1 83 doi: 10.1186/s12917-022-03171-1
Tong P, Duan R, Palidan N, Deng H, Duan L, Ren M, Song X, Jia C, Tian S, Yang E, Kuang L, Xie J.EHV-1 is one of the most serious viral pathogens that frequently cause abortion in horses around the world. However, so far, relatively little information is available on EHV-1 infections as they occur in China. In January 2021, during an abortion storm which occurred in Yili horses at the Chinese State Studs of Zhaosu (North Xinjiang, China), 43 out of 800 pregnant mares aborted. Results: PCR detection revealed the presence of EHV-1 in all samples as the possible cause of all abortions, although EHV-4, EHV-2 and EHV-5 were also found to circulate in the aborted fetuses. Furthermore, the parti...
Genetic analysis of mitochondrial DNA from ancient Equus caballus bones found at archaeological site of Joseon dynasty period capital area.
Animal bioscience    March 1, 2022   Volume 35, Issue 8 1141-1150 doi: 10.5713/ab.21.0500
Hong JH, Oh CS, Kim S, Kang IU, Shin DH.To understand the domestication and spread of horses in history, genetic information is essential. However, mitogenetic traits of ancient or medieval horses have yet to be comprehensively revealed, especially for East Asia. This study thus set out to reveal the maternal lineage of skeletal horse remains retrieved from a 15th century archaeological site (Gongpyeongdong) at Old Seoul City in South Korea. Methods: We extracted DNA from the femur of Equus caballus (SNU-A001) from Joseon period Gongpyeongdong site. Mitochondrial (mt) DNA (HRS 15128-16116) of E. caballus was amplified by polymerase ...
Gut Microbiome Characteristics in feral and domesticated horses from different geographic locations.
Communications biology    February 25, 2022   Volume 5, Issue 1 172 doi: 10.1038/s42003-022-03116-2
Ang L, Vinderola G, Endo A, Kantanen J, Jingfeng C, Binetti A, Burns P, Qingmiao S, Suying D, Zujiang Y, Rios-Covian D, Mantziari A, Beasley S....Domesticated horses live under different conditions compared with their extinct wild ancestors. While housed, medicated and kept on a restricted source of feed, the microbiota of domesticated horses is hypothesized to be altered. We assessed the fecal microbiome of 57 domestic and feral horses from different locations on three continents, observing geographical differences. A higher abundance of eukaryota (p < 0.05) and viruses (p < 0.05) and lower of archaea (p < 0.05) were found in feral animals when compared with domestic ones. The abundance of genes coding for microbe-...
The NF-κB-signalling pathway in mare’s endometrium infiltrated with the inflammatory cells.
Reproduction in domestic animals = Zuchthygiene    February 25, 2022   Volume 57, Issue 6 598-610 doi: 10.1111/rda.14099
Jasiński T, Zdrojkowski Ł, Kautz E, Juszczuk-Kubiak E, Ferreira-Dias G, Domino M.Endometritis is an important issue decreasing mares' fertility. In the case of endometritis, both inflammatory cells infiltration and proinflammatory molecules production are regulated by various cellular and gene regulatory mechanisms, including the nuclear factor-κB (NF-κB)-dependent pathway. NF-κB-signalling pathway has been recently studied in the equine endometrium in the context of endometrosis. Thus, this study aimed to determine gene transcription of NF-κB subunits (RelA; NF-κB1; NF-κB2), proinflammatory molecules (MCP-1; IL-6) and hyaluronan synthases (HAS 1; HAS 2; HAS 3) in en...
Novel Hendra Virus Variant Detected by Sentinel Surveillance of Horses in Australia.
Emerging infectious diseases    February 25, 2022   Volume 28, Issue 3 693-704 doi: 10.3201/eid2803.211245
Annand EJ, Horsburgh BA, Xu K, Reid PA, Poole B, de Kantzow MC, Brown N, Tweedie A, Michie M, Grewar JD, Jackson AE, Singanallur NB, Plain KM, Kim K....We identified and isolated a novel Hendra virus (HeV) variant not detected by routine testing from a horse in Queensland, Australia, that died from acute illness with signs consistent with HeV infection. Using whole-genome sequencing and phylogenetic analysis, we determined the variant had ≈83% nt identity with prototypic HeV. In silico and in vitro comparisons of the receptor-binding protein with prototypic HeV support that the human monoclonal antibody m102.4 used for postexposure prophylaxis and current equine vaccine will be effective against this variant. An updated quantitative PCR dev...
A Genome-Wide Scan for Signatures of Selection in Kurdish Horse Breed.
Journal of equine veterinary science    February 24, 2022   Volume 113 103916 doi: 10.1016/j.jevs.2022.103916
Nazari F, Seyedabadi HR, Noshary A, Emamjomeh-Kashan N, Banabazi MH.The genetic diversity and genomic regions being under putative natural selection in Kurdish horse population were studied. The samples from 72 horses were genotyped by using GGP Equine 70K SNP arrays. The Ne Slope (NeS) analyses revealed that a sharp decline in Ne has probably occurred around four generations ago, and high frequency of ROH with 2-4 Mbp in length suggested that the inbreeding has probably occurred around 20 generations ago. The effective population size (Ne) was 104 horses up to three generations ago and the average inbreeding (FROH) was 0.047(± 0.045). Using de-correlated com...
Safety and efficacy of a feed additive consisting of zearalenone hydrolase produced by Escherichia coli DSM 32731 for all terrestrial animal species (Biomin GmbH).
EFSA journal. European Food Safety Authority    February 24, 2022   Volume 20, Issue 2 e07157 doi: 10.2903/j.efsa.2022.7157
Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Fašmon Durjava M, Kouba M, López-Alonso M, López Puente S, Marcon F, Mayo B....Following a request from the European Commission, the Panel on Additives and Products or Substances used in Animal Feed (FEEDAP) was asked to deliver a scientific opinion on zearalenone hydrolase (ZenA) produced by DSM 32731 when used as a feed additive for all terrestrial animals. The production strain DSM 32731 is genetically modified and harbours a kanamycin resistance gene. No viable cells of the production strain were detected in the final product, but uncertainty remains on the presence of recombinant DNA in the final product. The ZenA contained in the additive is safe for all terrestr...
The Semen Microbiome and Semen Parameters in Healthy Stallions.
Animals : an open access journal from MDPI    February 22, 2022   Volume 12, Issue 5 534 doi: 10.3390/ani12050534
Quiñones-Pérez C, Martínez A, Ortiz I, Crespo F, Vega-Pla JL.Despite the advances in reproductive technology, there is still a considerable number of low sperm quality cases in stallions. Recent studies in humans have detected several seminal microflora-spermatozoa associations behind some idiopathic infertility cases. However, no studies are available on horses, and there is limited information on the microflora present in stallion ejaculates. Accordingly, the objective of this study was to examine associations to the presence of bacteria families with five sperm quality parameters: concentration, total number of spermatozoa, total and progressive moti...
Demystifying the Genetic Origins of the Mangalarga Horse Through the Influential Stallion Turbante J.O.
Journal of equine veterinary science    February 20, 2022   Volume 113 103910 doi: 10.1016/j.jevs.2022.103910
Patterson Rosa L, Campos FA, Martin K, Vierra M, Foster G, Lundquist E, Brooks SA, Lafayette C.Pedigrees and horse written ancestry contain numerous inconsistencies and divergence between farm histories, owner accounts and registration records. In particular, the origins of the Brazilian Mangalarga, or "Mangalarga Paulista'' horse breed is controversial, and the breed's popular history claims that one of its most famous individuals, Turbante J.O., may have been sired by an unknown Hanoverian stallion. Turbante J.O. sired over 1678 offspring and is present in about 71% of the male pedigrees. We genotyped Turbante J.O. and 29 registered Mangalarga individuals using a commercially availabl...
Molecular investigation of Babesia caballi in horses from the state of Rio de Janeiro, Brazil: Epidemiological aspects associated with the infection.
Veterinary parasitology, regional studies and reports    February 19, 2022   Volume 30 100709 doi: 10.1016/j.vprsr.2022.100709
Peckle M, Pires MS, Dos Santos TM, Roier ECR, da Silva CB, Vilela JAR, Paulino PG, Santos HA, Massard CL.The epidemiological aspects of Babesia caballi infection were evaluated in 516 horse samples from Rio de Janeiro, Brazil. The presence and infestation level of ticks on horses, breed conditions, and animal management were evaluated on each farm through an epidemiological questionnaire. The gene that codes for rhoptry-associated protein-1 (RAP-1) of B. caballi was amplified by nested PCR (nPCR). Among the horses sampled, 17.2% (n = 89/516) presented B. caballi DNA. The characterized samples showed 99-100% similarity with other isolates of B. caballi based on the RAP-1 gene, available in GenBa...
Tumor Cell Plasticity in Equine Papillomavirus-Positive Versus-Negative Squamous Cell Carcinoma of the Head and Neck.
Pathogens (Basel, Switzerland)    February 18, 2022   Volume 11, Issue 2 266 doi: 10.3390/pathogens11020266
Strohmayer C, Klang A, Kummer S, Walter I, Jindra C, Weissenbacher-Lang C, Redmer T, Kneissl S, Brandt S.Squamous cell carcinoma of the head and neck (HNSCC) is a common malignant tumor in humans and animals. In humans, papillomavirus (PV)-induced HNSCCs have a better prognosis than papillomavirus-unrelated HNSCCs. The ability of tumor cells to switch from epithelial to mesenchymal, endothelial, or therapy-resistant stem-cell-like phenotypes promotes disease progression and metastasis. In equine HNSCC, PV-association and tumor cell phenotype switching are poorly understood. We screened 49 equine HNSCCs for equine PV (EcPV) type 2, 3 and 5 infection. Subsequently, PV-positive versus -negative lesi...
Fine-Scale Analysis of Runs of Homozygosity Islands Affecting Fertility in Mares.
Frontiers in veterinary science    February 17, 2022   Volume 9 754028 doi: 10.3389/fvets.2022.754028
Laseca N, Molina A, Ramón M, Valera M, Azcona F, Encina A, Demyda-Peyrás S.The loss of genetic variability in livestock populations bred under strict selection processes is a growing concern, as it may lead to increased inbreeding values and lower fertility, as a consequence of the "inbreeding depression" effect. This is particularly important in horses, where inbreeding levels tend to rise as individuals become more and more closely related. In this study, we evaluated the effect of increased inbreeding levels on mare fertility by combining an SNP-based genomic approach using runs of homozygosity and the estimation of genetic breeding values for reproductive traits ...
What is the relevance of seminal plasma from a functional and preservation perspective?
Animal reproduction science    February 17, 2022   Volume 246 106946 doi: 10.1016/j.anireprosci.2022.106946
Andrade AFC, Knox RV, Torres MA, Pavaneli APP.When preserving sperm in the liquid or cryopreserved state, seminal plasma (SP) components within ejaculates can alter fertilizing capacity of these gametes. Depending on the species or how semen is collected, volume and concentration of SP components varies considerably. The SP contains substances essential for maintenance of sperm viability and fertility; however, these components can be deleterious depending on quantity, or duration of time before there is removal of SP from sperm in semen processing. Substances that impair (e.g., BSP - bull; HSP-1 - stallion; Major seminal plasma protein P...
Clinical Progression of Theileria haneyi in Splenectomized Horses Reveals Decreased Virulence Compared to Theileria equi.
Pathogens (Basel, Switzerland)    February 16, 2022   Volume 11, Issue 2 254 doi: 10.3390/pathogens11020254
Sears KP, Knowles DP, Fry LM.The global importance of the hemoparasite to equine health was recently shown by its resistance to imidocarb dipropionate (ID) and its interference with clearance by ID in some co-infected horses. Genetic characterization of revealed marked genomic reduction compared to , and initial experiments demonstrated reduced clinical severity in spleen-intact horses. Furthermore, in early experiments, splenectomized horses survived infection and progressed to an asymptomatic carrier state, in stark contrast to the high fatality rate of in splenectomized horses. Thus, we hypothesized that is less ...
Investigation of plasma cell-free DNA as a potential biomarker in horses. Bayless RL, Cooper BL, Sheats MK.Plasma cell-free DNA (cfDNA) is a biomarker of ischemia, systemic inflammation, and mortality in humans with gastrointestinal disease. Cell-free DNA has not been investigated as a biomarker for equine colic, to our knowledge. We hypothesized that cfDNA could be measured accurately in neat equine plasma using a benchtop fluorometer and that plasma cfDNA would be elevated in emergency patients compared to healthy horses. Plasma was obtained from blood collected in Roche DNA stabilizing tubes. We used the Qubit 4 fluorometer and 1× dsDNA HS assay kit to measure cfDNA concentration in neat patien...
Environmental constraints and pathologies that modulate equine placental genes and development.
Reproduction (Cambridge, England)    February 14, 2022   Volume 163, Issue 3 R25-R38 doi: 10.1530/REP-21-0116
Robles M, Loux S, de Mestre AM, Chavatte-Palmer P.Equine placental development is a long process with unique features. Implantation occurs around 40 days of gestation (dpo) with the presence of a transient invasive placenta from 25-35 to 100-120 dpo. The definitive, non-invasive placenta remains until term (330 days). This definitive placenta is diffuse and epitheliochorial, exchanging nutrients, gas and waste with the endometrium through microvilli, called microcotyledons. These are lined by an external layer of haemotrophic trophoblast. Moreover, histotrophic exchange remains active through the histotrophic trophoblast located along the are...
Maternal effect on first-year growth of Hokkaido native foals kept outdoors all year round.
Animal science journal = Nihon chikusan Gakkaiho    February 12, 2022   Volume 93, Issue 1 e13694 doi: 10.1111/asj.13694
Huricha , Kawai M, Inose Y, Yamada F, Ninomiya S.In this study, we investigated maternal effects on the growth of Hokkaido native horses kept outdoors throughout the year. We used the data on body weight (BW), height at withers (HW), heart girth (HG), and cannon circumference (CC) of 517 foals during the first year of life to (1) examine the growth patterns by comparing six linear mixed models and (2) analyze the maternal effect on BW, HW, HG, and CC for each month by estimating variance components. The segmented polynomial third-order regression equation was selected as the best model for all the traits. The estimated proportion of variance...
Selection signatures for heat tolerance in Brazilian horse breeds.
Molecular genetics and genomics : MGG    February 12, 2022   Volume 297, Issue 2 449-462 doi: 10.1007/s00438-022-01862-w
de Faria DA, do Prado Paim T, Dos Santos CA, Paiva SR, Nogueira MB, McManus C.Since domestication, horse breeds have adapted to their environments and differentiated from one another. This paper uses two methods to detect selection signatures in 23 horse breeds, eight of which are Brazilian (610 animals), both cold-blooded and warm-blooded, from temperate and tropical regions. These animals were genotyped using the GGP Equine BeadChip and we analysed the data by Principal Component Analysis (PCA). The samples were separated into groups based on their geographical area of origin and PCA results studied. The genomic regions under selection were detected by hapFLK and PCAd...
Relationship between foal daily gain, suckling behavior, and the distance between foals and their mares in the first 40 days of life of Hokkaido native horses kept outdoors year-round.
Animal science journal = Nihon chikusan Gakkaiho    February 12, 2022   Volume 93, Issue 1 e13692 doi: 10.1111/asj.13692
Huricha , Kawai M, Ninomiya S.In this study, we investigated suckling behavior and the distance between a foal and its mare as indicators of foal growth in Hokkaido native horses (HKD) during the first 40 days of life. Direct observations were made of 22 mare and foal pairs from two consecutive days 1 and 2, 5 and 6, 10 and 11, 20 and 21, 30 and 31, and 40 and 41 after birth by focal animal sampling for 3 h per day. Suckling behavior was continuously recorded, along with the terminator. The distance between the foal and its mare was determined using the instantaneous sampling method (1 min), and the percentage was calc...
Horses as a source of bioactive fecal strains Enterococcus mundtii.
Veterinary research communications    February 11, 2022   Volume 46, Issue 3 739-747 doi: 10.1007/s11259-022-09893-9
Focková V, Styková E, Simonová MP, Maďar M, Kačírová J, Lauková A.Bacteriocin-producing bacteria with probiotic character are known as nutritional supplements mainly for livestock. Among those beneficial bacteria we also found enterococci. Because the species strains Enterococcus mundtii also can produce bacteriocins, this study was focused on fecal strains E. mundtii from horses and their bioactivity with a view to their possible future use in breeding. Rectal removal from 47 horses (40 mares and 7 stallions), the Norik breed from Muráň were sampled in eastern Slovakia during November 2019 year. Horses age ranged from five months up to 23 years. Using MAL...
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