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Topic:Infectious Disease

Infectious diseases in horses encompass a range of illnesses caused by bacteria, viruses, fungi, or parasites. These diseases can affect various systems within the equine body, leading to symptoms that range from mild discomfort to severe systemic illness. Common infectious diseases in horses include equine influenza, strangles, equine herpesvirus, and West Nile virus. These diseases can be transmitted through direct contact with infected animals, contaminated surfaces, or vectors such as insects. Understanding the mechanisms of transmission, pathogenesis, and immune response is essential for effective prevention and control. This page compiles peer-reviewed research studies and scholarly articles that explore the epidemiology, diagnosis, treatment, and management of infectious diseases in horses.
Equine Rotavirus A under the One Health Lens: Potential Impacts on Public Health.
Viruses    January 16, 2024   Volume 16, Issue 1 130 doi: 10.3390/v16010130
Carossino M, Vissani MA, Barrandeguy ME, Balasuriya UBR, Parreño V.Group A rotaviruses are a well-known cause of viral gastroenteritis in infants and children, as well as in many mammalian species and birds, affecting them at a young age. This group of viruses has a double-stranded, segmented RNA genome with high genetic diversity linked to point mutations, recombination, and, importantly, reassortment. While initial molecular investigations undertaken in the 1900s suggested host range restriction among group A rotaviruses based on the fact that different gene segments were distributed among different animal species, recent molecular surveillance and genome c...
Study on species distribution and seasonal dynamics of equine tick infestation in Ardabil province, northwest of Iran.
Veterinary parasitology, regional studies and reports    January 14, 2024   Volume 48 100987 doi: 10.1016/j.vprsr.2024.100987
Gholmohammadi S, Malekifard F, Yakhchali M.Ticks are important ectoparasites in equids, causing economic losses in animal husbandry in Iran and worldwide. This study was aimed to determine frequency and species diversity of hard ticks in equids in Ardabil province, during the four seasons in 2021. A total of 240 equids (187 horses, 53 donkeys) were randomly selected and examined. Ixodid ticks were collected from body surface of examined animals and identified. Of all examined equids, 32.5% horses, and 4.58% donkeys were infested with a total number of 412 ixodid ticks. Tick indices (tick number per animal) were 4.62. There was signific...
Molecular phylogenetic analysis of Echinococcus multilocularis from horses raised in Canada or Japan, using mitochondrial cytochrome b gene-targeted PCR.
Food and waterborne parasitology    January 13, 2024   Volume 34 e00219 doi: 10.1016/j.fawpar.2024.e00219
Hifumi T, Tanaka T, Suzu I, Sato M, Akioka K, Fujimata C, Shinkai R, Maeda T, Kusakisako K, Ikadai H, Miyoshi N.Alveolar echinococcosis is a zoonotic disease caused by a larval-stage infection. Geographical haplotyping targeting the parasite's mitochondrial cytochrome () gene has been reported for isolates from definitive and intermediate hosts (wild canids and rodents); however, there are limited reports on strain typing for the dead-end host, the horse, which could act as a sentinel for E. Accordingly, we investigated the diversity of in isolates obtained from slaughtered Japanese and Canadian horses originating from the Iburi and Hidaka regions in Hokkaido and from Alberta, respectively, with PCR ...
Equine herpesvirus 4 infected domestic horses associated with Sintashta spoke-wheeled chariots around 4,000 years ago.
Virus evolution    January 12, 2024   Volume 10, Issue 1 vead087 doi: 10.1093/ve/vead087
Lebrasseur O, More KD, Orlando L.Equine viral outbreaks have disrupted the socio-economic life of past human societies up until the late 19th century and continue to be of major concern to the horse industry today. With a seroprevalence of 60-80 per cent, equine herpesvirus 4 (EHV-4) is the most common horse pathogen on the planet. Yet, its evolutionary history remains understudied. Here, we screen the sequenced data of 264 archaeological horse remains to detect the presence of EHV-4. We recover the first ancient EHV-4 genome with 4.2× average depth-of-coverage from a specimen excavated in the Southeastern Urals and dated ...
Constructing an ELISA for Detection of Anti-Borrelia in Wildlife and Agricultural Animals.
Methods in molecular biology (Clifton, N.J.)    January 2, 2024   Volume 2742 47-67 doi: 10.1007/978-1-0716-3561-2_4
Bland J, McGowan C, Bush E, Lloyd V.Zoonotic diseases have major impacts on human and animal health, as well as being ecologically significant. Lyme Borreliosis or Lyme disease, caused by infection by pathogenic members of the Borrelia genus, is among these zoonotic diseases. Serology is one of the most accessible means for indirect surveillance of pathogen presence by monitoring the presence, abundance, and type of immune response to the pathogen or pathogen-associated epitopes. Serological surveillance of wild animals is important as wild animals are the primary reservoirs of many zoonotic diseases. Similarly, serological sur...
Evidence of West Nile Virus Circulation in Horses and Dogs in Libya.
Pathogens (Basel, Switzerland)    December 31, 2023   Volume 13, Issue 1 41 doi: 10.3390/pathogens13010041
West Nile virus (WNV) is a globally significant mosquito-borne Flavivirus that causes West Nile disease (WND). In Libya, evidence of WNV circulation has been reported in humans but never in animals. The aim of this study was to determine the seroprevalence of WNV infection in horses and dogs in Libya. In total, 574 and 63 serum samples were collected from apparently healthy, unvaccinated horses and dogs, respectively, between 2016 and 2019. A commercially available competitive enzyme-linked immunosorbent assay (c-ELISA) kit was initially used to test the collected samples for the presence of W...
Systematic Review of Equine Influenza A Virus Vaccine Studies and Meta-Analysis of Vaccine Efficacy.
Viruses    November 28, 2023   Volume 15, Issue 12 2337 doi: 10.3390/v15122337
Elliott S, Olufemi OT, Daly JM.Vaccines against equine influenza have been available since the late 1960s, but outbreaks continue to occur periodically, affecting both vaccinated and unvaccinated animals. The aim of this study was to systematically evaluate the efficacy of vaccines against influenza A virus in horses (equine IAV). For this, PubMed, CAB abstracts, and Web of Science were searched for controlled trials of equine IAV vaccines published up to December 2020. Forty-three articles reporting equine IAV vaccination and challenge studies in previously naïve equids using an appropriate comparison group were included ...
Abortion storm of Yili horses is associated with Equus caballus papillomavirus 2 variant infection.
Archives of microbiology    November 24, 2023   Volume 206, Issue 1 5 doi: 10.1007/s00203-023-03723-5
Tong P, Palidan N, Song X, Tian S, Zhang L, Wu G, Deng H, Jia C, Duan R, Suo Y, Pan J, Dang Y, Kuang L, Xie J.Nine different species of Equus caballus papillomavirus (EcPV) and three bovine papillomaviruses (BPVs) have been reported to infect horses. However, there are few descriptions of such infections in China. In our pioneer study on Chinese horses, we identified EcPV-2 in the nasal swabs (4/230, 1.7%) of Yili horses, and the semen (3/18, 16.7%) of thoroughbred horses. This indicated that EcPV is indeed hosted by horses in China, and that EcPV-2 might be transmitted though breeding. Further detection of EcPVs in the lung tissues of aborted fetuses of Yili horses, which were originally negative for...
Cross-Sectional Survey of Horse Owners to Assess Their Knowledge and Use of Biosecurity Practices for Equine Infectious Diseases in the United States.
Animals : an open access journal from MDPI    November 17, 2023   Volume 13, Issue 22 3550 doi: 10.3390/ani13223550
White N, Pelzel-McCluskey A.Horses are transported in the United States more than any other livestock species and co-mingle at various events; therefore, they are considered to be at an increased risk for infectious disease transmission. The fragmented movement of horses combined with numerous sites of co-mingling makes tracing the potential spread of a disease outbreak a necessary part of an infection control plan, both locally and nationally. The cross-movement of personnel with horses and the persistence of endemic diseases make biosecurity implementation an ongoing challenge. Although many of the risks for infection ...
Anti-HEV seroprevalence and rate of viremia in a German cohort of dogs, cats, and horses.
Scientific reports    November 7, 2023   Volume 13, Issue 1 19240 doi: 10.1038/s41598-023-46009-y
Pischke S, Knoop EV, Mader M, Kling L, Wolski A, Wagner A, Mueller K, Horvatits T, Stiller J, Wisnewski K, Kohn B, Schulze Zur Wiesch J, Groschup MH....Hepatitis E virus (HEV) genotype 3 infections in Germany are mainly transmitted zoonotically through the consumption of swine meat. Furthermore, there is evidence that pets might come into contact with HEV, but the relevance of companion animals as possible sources of HEV transmission in Germany still needs to be defined. A monitoring study was therefore carried out on dogs, cats, and horses from Germany. In total 365 serum samples from pets (124 dogs, 119 cats, and 122 horses) were tested for HEV by PCR and for anti-HEV antibodies by a commercial ELISA. The HEV seroprevalence determined by th...
First report of Amblyomma sculptum (Amblyomma cajennense complex) in a Brazilian state classified as a silent area for human rickettsiosis.
Veterinary world    November 1, 2023   Volume 16, Issue 11 2200-2204 doi: 10.14202/vetworld.2023.2200-2204
da Gama BC, Martins TF, Labruna MB, Vieira RFDC, de Almeida JC.Studies on ticks of public health concern in equine husbandry are scarce in the Northeastern region of Brazil. This study aimed to investigate the presence of ticks on horses in the State of Alagoas, which is classified as a silent area for human rickettsiosis. Unassigned: Ticks infesting horses were collected using anatomical tweezers or a commercial hook and kept in ethanol-labeled tubes for taxonomic identification. Unassigned: A total of 2,238 ticks were found. Ticks were identified as 2,215 (98.89%, 95% CI: 98.41-99.28) , 19 (0.98%, 95% CI: 0.05-1.38) , and 4 (0.18%; 95% CI: 0.007-0.46) ....
Equine ANP32 proteins support influenza A virus RNA polymerase activity.
Virologica Sinica    October 27, 2023   Volume 38, Issue 6 951-960 doi: 10.1016/j.virs.2023.10.009
Zhang Y, Guo X, Yu M, Sun L, Qu Y, Guo K, Hu Z, Liu D, Zhang H, Wang X.Host ANP32 family proteins are crucial for maintaining the activity of influenza RNA polymerase and play an important role in the cross-species transmission of influenza viruses. To date, the molecular properties of equine ANP32 (eqANP32) protein are poorly understood, particularly the mechanisms that affect equine influenza virus (EIV) RNA polymerase activity. Here, we found that there are six alternative splicing variants of equine ANP32A (eqANP32A) with different levels of expression. Further studies showed that these six splicing variants of eqANP32A supported the activity of EIV RNA polym...
Development of a Real-Time Quantitative PCR Based on a TaqMan-MGB Probe for the Rapid Detection of Theileria haneyi.
Microorganisms    October 26, 2023   Volume 11, Issue 11 2633 doi: 10.3390/microorganisms11112633
Zhou B, Yang G, Hu Z, Chen K, Guo W, Wang X, Du C.Equine piroplasmosis (EP) is a parasitic disease caused by (), () and (). This disease is considered to be reportable by the World Organization for Animal Health (WOAH). Real-time quantitative PCR (qPCR) is regarded as a straightforward, rapid and sensitive diagnostic method to detect pathogens. However, qPCR has not been employed in the various epidemiological investigations of . In this study, we developed a new qPCR method to detect based on the chr1sco (chromosome 1 single-copy open reading frame (ORF)) gene, which has no detectable orthologs in or A TaqMan MGB probe was used in the ...
Phylogenetic analysis of Ehrlichia species isolated from horses and dogs in Iran.
Comparative immunology, microbiology and infectious diseases    October 24, 2023   Volume 103 102080 doi: 10.1016/j.cimid.2023.102080
Molazadeh S, Tukmechi A, Hadian M, Dalir-Naghadeh B.This study aimed to determine the prevalence and phylogenetic analysis of Ehrlichia spp. in horses and dogs in Iran. Blood samples were collected from 400 animals, including 200 horses and 200 dogs, from five different provinces in Iran. Polymerase chain reaction (PCR) was used to detect Ehrlichia spp. based on amplification of the 16S rRNA gene. The semi-nested PCR method was used to amplify the dsb, TRP36, and gltA genes. The results showed that 4.5 % of the samples (3 % horses and 6 % dogs) were positive for Ehrlichia sp. The highest prevalence was observed in Kerman and Khuzestan, while th...
Culicoides-borne Orbivirus epidemiology in a changing climate.
Journal of medical entomology    October 20, 2023   Volume 60, Issue 6 1221-1229 doi: 10.1093/jme/tjad098
Hudson AR, McGregor BL, Shults P, England M, Silbernagel C, Mayo C, Carpenter M, Sherman TJ, Cohnstaedt LW.Orbiviruses are of significant importance to the health of wildlife and domestic animals worldwide; the major orbiviruses transmitted by multiple biting midge (Culicoides) species include bluetongue virus, epizootic hemorrhagic disease virus, and African horse sickness virus. The viruses, insect vectors, and hosts are anticipated to be impacted by global climate change, altering established Orbivirus epidemiology. Changes in global climate have the potential to alter the vector competence and extrinsic incubation period of certain biting midge species, affect local and long-distance dispersal ...
Molecular and sequencing study and identification of novel SeM-type in beta-hemolytic streptococci involving the upper respiratory tract in Iran.
BMC veterinary research    October 17, 2023   Volume 19, Issue 1 210 doi: 10.1186/s12917-023-03772-4
Moghaddam S, Lotfollahzadeh S, Salehi TZ, Hassanpour A, Manesh HT, Tamai IA.Beta-hemolytic streptococci involving the upper respiratory tract cause strangles and strangles-like diseases in horses and cause severe economic damage to the equestrian club each year. Therefore, careful epidemiological study of these bacteria, evaluation of phylogenetic connections and SeM-typing can be useful to determine the source and epidemiological characteristics of the disease outbreak. Isolates were analyzed using molecular and phylogenetic methods and to determine antibiotic resistance pattern in Iranian isolates. Molecular and phylogenetic methods were used to evaluate Iranian str...
Neutralizing based seroprevalence study of Toscana virus in livestock from Algeria.
Comparative immunology, microbiology and infectious diseases    October 5, 2023   Volume 103 102075 doi: 10.1016/j.cimid.2023.102075
Sellali S, Lafri I, Ayhan N, Medrouh B, Messahel NE, Lafri M, Charrel R, Bitam I.Toscana virus is a sandfly-borne human pathogen belonging to Phlebovirus genus into Phenuiviridae family. It is emerging in north Africa posing a complex threat to public health. TOSV is heavily affecting sandfly-exposed people in northern Algeria. A larger distribution has recently been stated in Algeria by using dog sera. Dog exposure to TOSV was repeatedly identified in north Algeria, with 4.56% lately detected to possess respective neutralizing antibodies. However, evidence for TOSV has only been observed in dogs among various species of domestic animals. Therefore, we attempted to assess ...
A Survey of Henipavirus Tropism-Our Current Understanding from a Species/Organ and Cellular Level.
Viruses    October 4, 2023   Volume 15, Issue 10 2048 doi: 10.3390/v15102048
Diederich S, Babiuk S, Boshra H.Henipaviruses are single-stranded RNA viruses that have been shown to be virulent in several species, including humans, pigs, horses, and rodents. Isolated nearly 30 years ago, these viruses have been shown to be of particular concern to public health, as at least two members (Nipah and Hendra viruses) are highly virulent, as well as zoonotic, and are thus classified as BSL4 pathogens. Although only 5 members of this genus have been isolated and characterized, metagenomics analysis using animal fluids and tissues has demonstrated the existence of other novel henipaviruses, suggesting a far gre...
European Inter-Laboratory Proficiency Test for Dourine Antibody Detection Using the Complement Fixation Test.
Veterinary sciences    September 26, 2023   Volume 10, Issue 10 592 doi: 10.3390/vetsci10100592
Hébert L, Froger D, Madeline A, Lecouturier F, Lemans C, Zientara S.Dourine is a sexually transmitted parasitic disease affecting equids. Its causative agent is referred to as and the prescribed serodiagnosis method is the complement fixation test (CFT). In the context of our European Reference Laboratory mandate for equine diseases (excluding African horse sickness), we organised dourine CFT inter-laboratory proficiency tests (ILPTs) in 2015, 2018 and 2022 to evaluate the performance of the European Union network of National Reference Laboratories (NRLs) for dourine. ILPT panels were composed of horse sera with or without antibodies against spp. originating...
Metagenomic analysis of herbivorous mammalian viral communities in the Northwest Plateau.
BMC genomics    September 25, 2023   Volume 24, Issue 1 568 doi: 10.1186/s12864-023-09646-1
Pan J, Ji L, Wu H, Wang X, Wang Y, Wu Y, Yang S, Shen Q, Liu Y, Zhang W, Zhang K, Shan T.Mammals are potential hosts for many infectious diseases. However, studies on the viral communities of herbivorous mammals in the Northwest Plateau are limited. Here, we studied the viral communities of herbivorous mammals in the Northwest Plateau using virus metagenomic analysis to analyze and compare the viral community composition of seven animal species. Results: By library construction and next-generation sequencing, contigs and singlets reads with similar viral sequences were classified into 24 viral families. Analyzed from the perspective of sampling areas, the virus community compositi...
Prevalence of Neospora caninum as an etiologic agent of animal abortion in Kurdistan Region of Iraq.
Polish journal of veterinary sciences    September 20, 2023   Volume 26, Issue 3 349-357 doi: 10.24425/pjvs.2023.145039
Mohammed RR, Tavassoli M, Sidiq KR, Esmaeilnejad B.Neospora caninum ( N. caninum) is the etiologic agent of neosporosis, a potential cause of severe reproductive disorders in cattle, small ruminants, equines, wild animals and canids across the world. The current study is performed to estimate molecular prevalence of N. caninum in small ruminants and equines that had abortion in Kurdistan region of Iraq. A total of 64 tissue samples (brain, placenta, heart, lung and liver) were taken from aborted foetuses, with a total of 122 dam blood samples taken from 63 sheep, 39 goats, 12 mares and 8 jennies in local breed fields. Besides, a risk factor an...
First report of infection with metacestode stages of Echinococcus multilocularis in a kulan (Equus hemionus kulan) from Slovakia.
International journal for parasitology. Parasites and wildlife    September 9, 2023   Volume 22 80-83 doi: 10.1016/j.ijppaw.2023.09.003
Delling C, Helm C, Heinze P, Friedman M, Böttcher D.While the principle definitive host of the zoonotic cestode in Europe is the red fox, several rodent species act as main intermediate hosts. Among others, e.g., humans, dogs, and pigs, also horses have been described to act as aberrant hosts in highly endemic regions. Here, a case of an infection in a kulan () is described. The five years old kulan from a zoo in Slovakia was transported to an animal park in Germany. The animal had to be euthanized within a few weeks after the import due to its poor general state of health. The pathological examination revealed a nodular mass in the liver as ...
A case of equine piroplasmosis in the Tokyo 2020 Olympic Games.
Journal of equine science    September 8, 2023   Volume 34, Issue 3 93-99 doi: 10.1294/jes.34.93
Aida H, Foreman JH, Ochi A, Takizawa Y, Yamanaka T.Equine piroplasmosis is an infectious disease caused by Babesia caballi and Theileria equi. A competition horse that had been imported to the Equestrian Park for the Tokyo 2020 Olympic Games and had a fever over 40°C and severe anemia was diagnosed with equine piroplasmosis by blood smear and direct polymerase chain reaction (PCR) tests for Theileria equi. Treatment with protozoan anthelmintics and whole blood transfusion diminished the fever, improved the anemia, and allowed the horse to return home safely. Preparation for routine cases of this infection should include the development of a s...
Streptococcus zooepidemicus Meningitis in an HIV-Positive Horse Breeder Patient: A Case Study and Literature Review.
Infectious disease reports    September 7, 2023   Volume 15, Issue 5 527-534 doi: 10.3390/idr15050052
subsp. is a rare etiologic agent of bacterial meningitis in humans. The disease is a zoonotic infection and is transmitted through close contact with domestic animals, mainly horses. Only 37 cases of meningitis have been reported in the literature until July 2023. The aim of this study is to present a rare clinical case of -related meningitis in a human immunodeficiency virus (HIV)-positive patient and analyze the literature. We present a 23-year-old horse breeder patient with advanced immunosuppression due to acquired immunodeficiency syndrome (AIDS) and meningitis, admitted at the Clinic...
Visualizing neutrophil extracellular traps in septic equine synovial and peritoneal fluid samples using immunofluorescence microscopy. Birckhead EM, Das S, Tidd N, Raidal SL, Raidal SR.Septic synovitis and peritonitis are routinely diagnosed in horses based on clinical examination findings and laboratory assessment of synoviocentesis and abdominocentesis samples, respectively. Diagnosis is difficult in some cases because of an overlap in laboratory results for septic and non-septic inflammation. Neutrophil extracellular trap (NET) formation is part of the innate immune response against pathogens. Identifying and quantifying NETs, which have not been explored in clinical samples from horses with septic synovitis and peritonitis, to our knowledge, may be helpful in detecting i...
First identification and characterization of ovine gammaherpesvirus type 2 in horses and artiodactyla from an outbreak of malignant catarrhal fever in Mexico.
PloS one    September 1, 2023   Volume 18, Issue 9 e0290309 doi: 10.1371/journal.pone.0290309
Madrigal-Valencia TL, Saavedra-Montañez M, Pérez-Torres A, Hernández J, Segalés J, Hernández YD, Candanosa-Aranda IE, Pérez-Guiot A....Ovine gammaherpesvirus 2 (OvHV-2), a member of the genus Macavirus, causes sheep-associated malignant catarrhal fever (SA-MCF), a fatal lymphoproliferative disease affecting a wide variety of ungulates in addition to horses. This study described an outbreak of SA-MCF in Mexico and the identification of the OvHV-2 virus in primary rabbit testis cultures through the generation of intranuclear inclusion bodies, syncytia, immunofluorescence (IF), immunocytochemistry (ICC), immunohistochemistry (IHC), endpoint polymerase chain reaction (PCR), and partial sequencing of the ORF75 gene. The animals in...
Fasciola hepatica infection in horses in three governorates in northern Egypt: prevalence and risk factors.
Journal of equine veterinary science    August 29, 2023   104915 doi: 10.1016/j.jevs.2023.104915
Alshammari A, Gattan HS, Marzok M, Salem M, Al-Jabr OA, Selim A.Fasciola hepatica is a trematode parasite that affects wide range of mammalian hosts including horses. There are no epidemiological data on fasciolosis in Egyptian horses. Hence, the present study aimed to evaluate the seroprevalence of F. hepatica in horses using ELISA as well as assess the associated risk factors for fasciolosis infection. A total of 400 sera samples of horses from three Egyptian governorates were examined. The overall seroprevalence rate in horses was 13% and the disease was more prevalent in Qalubia (14.17%) and Gharbia (16.67%) which are located at Nile Delta. The likelih...
Partial Genome Characterization of Novel Parapoxvirus in Horse, Finland.
Emerging infectious diseases    August 23, 2023   Volume 29, Issue 9 1941-1944 doi: 10.3201/eid2909.230049
Virtanen J, Hautaniemi M, Dutra L, Plyusnin I, Hautala K, Smura T, Vapalahti O, Sironen T, Kant R, Kinnunen PM.We report a sequencing protocol and 121-kb poxvirus sequence from a clinical sample from a horse in Finland with dermatitis. Based on phylogenetic analyses, the virus is a novel parapoxvirus associated with a recent epidemic; previous data suggest zoonotic potential. Increased awareness of this virus and specific diagnostic protocols are needed.
Ferret Models for Henipavirus Infection.
Methods in molecular biology (Clifton, N.J.)    August 23, 2023   Volume 2682 205-217 doi: 10.1007/978-1-0716-3283-3_15
Rockx B, Mire CE.Henipaviruses are emerging zoonotic viruses that can cause outbreaks of severe respiratory and neurological disease in humans and animals such as horses. The mechanism by which these viruses can cause disease remain largely unknown and to date there are no therapeutics or vaccines approved for use in humans. Nipah virus is listed on the World Health Organization R & D Blueprint list of epidemic threats. In order to advance the availability of effective therapeutics and vaccines and medicines that can be used to save lives and avert large scale crises, animal models are required which recap...
Core genome multilocus sequence typing analysis of Finnish Taylorella equigenitalis isolates.
Veterinary microbiology    August 19, 2023   Volume 285 109853 doi: 10.1016/j.vetmic.2023.109853
Pelkola K, Heinikainen S, Pohjanvirta T.In Finland, Taylorella equigenitalis, the causative agent of contagious equine metritis (CEM), was first detected in 1992. The aim of this study was to genotype Finnish T. equigenitalis isolates to investigate the epidemiology of the infection in the Finnish horse population. A total of 34 T. equigenitalis isolates from 24 horses obtained during 1992-2021 were subjected to whole genome sequencing (WGS) and subsequent local ad hoc core genome multi-locus sequence typing (cgMLST) targeting 1259 loci. Classical MLST profiles were extracted from the whole-genome sequence data. Three novel MLST ty...
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