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Topic:Species Comparison

Species comparison in horses involves examining the physiological, anatomical, and behavioral differences and similarities between horses and other animal species. This area of study can provide insights into the evolutionary adaptations and ecological roles of horses. Researchers often focus on aspects such as digestive systems, locomotion, sensory capabilities, and social structures to understand how horses have evolved to meet their environmental and survival needs. Comparative studies may also explore genetic differences and similarities, contributing to a broader understanding of species evolution and adaptation. This page aggregates peer-reviewed research and scholarly articles that analyze various aspects of species comparison involving horses, highlighting significant findings and methodologies used in the field.
Transposable Element Targeting by piRNAs in Laurasiatherians with Distinct Transposable Element Histories.
Genome biology and evolution    May 9, 2016   Volume 8, Issue 5 1327-1337 doi: 10.1093/gbe/evw078
Vandewege MW, Platt RN, Ray DA, Hoffmann FG.PIWI proteins and PIWI-interacting RNAs (piRNAs) are part of a cellular pathway that has evolved to protect genomes against the proliferation of transposable elements (TEs). PIWIs and piRNAs assemble into complexes that are involved in epigenetic and post-transcriptional repression of TEs. Most of our understanding of the mechanisms of piRNA-mediated TE silencing comes from fruit fly and mouse models. However, even in these well-studied animals it is unclear how piRNA responses relate to variable TE expression and whether the strength of the piRNA response affects TE content over time. Here, w...
[Species Identification Based on Morphological Variability of Femur].
Fa yi xue za zhi    May 5, 2016   Volume 31, Issue 6 428-431 
Xin CR, Bai S, Qin ZJ, Gao JS, Lin ZQ, Cheng YB.To study the morphological characteristics of femurs of adult human and 11 kinds of adult animals from cattle, horses, pigs, goats, sheep, dogs, cats, rabbits, geese, ducks, chickens, and to establish an effective species identification method among various species. Methods: The 4 cm mid-diaphyseal segment of the femur from adult human (older than 20 years old) at autopsy was obtained. Addi-tionally, the 4 cm ones from 11 kinds of adult animals were obtained. After decalcification, all femurs were made into slices, and then were observed by optical microscope. The 25 indexes were selected and ...
Practical Bias Correction in Aerial Surveys of Large Mammals: Validation of Hybrid Double-Observer with Sightability Method against Known Abundance of Feral Horse (Equus caballus) Populations.
PloS one    May 3, 2016   Volume 11, Issue 5 e0154902 doi: 10.1371/journal.pone.0154902
Lubow BC, Ransom JI.Reliably estimating wildlife abundance is fundamental to effective management. Aerial surveys are one of the only spatially robust tools for estimating large mammal populations, but statistical sampling methods are required to address detection biases that affect accuracy and precision of the estimates. Although various methods for correcting aerial survey bias are employed on large mammal species around the world, these have rarely been rigorously validated. Several populations of feral horses (Equus caballus) in the western United States have been intensively studied, resulting in identifica...
The prevalence, abundance and distribution of cyathostomins (small stongyles) in horses from Western Romania.
Veterinary parasitology    April 30, 2016   Volume 223 205-209 doi: 10.1016/j.vetpar.2016.04.021
Forty seven working horses from Romania were post-mortem examined for small strongyles (Cyathostominae) infections. All horses were found infected. The overall cyathostomins intensity ranged from 390 to 13,010 and horses were infected by 8-24 species. The intensity was higher in ventral colon (1531) and dorsal colon (824), the lowest in the caecum (524). Twenty four species were identified. Cyathostomum catinatum, Cylicocyclus insigne, and C. Nassatus had 100% of prevalence. Over 50% of horses were infected by Coronocyclus coronatus, Cylicostephanus calicatus, C. goldi, and C. longibursatus. O...
Ion Channel Function and Cross-Species Determinants in Viral Assembly of Nonprimate Hepacivirus p7.
Journal of virology    April 29, 2016   Volume 90, Issue 10 5075-5089 doi: 10.1128/JVI.00132-16
Walter S, Bollenbach A, Doerrbecker J, Pfaender S, Brown RJP, Vieyres G, Scott C, Foster R, Kumar A, Zitzmann N, Griffin S, Penin F, Pietschmann T....Nonprimate hepacivirus (NPHV), the closest homolog of hepatitis C virus (HCV) described to date, has recently been discovered in horses. Even though the two viruses share a similar genomic organization, conservation of the encoded hepaciviral proteins remains undetermined. The HCV p7 protein is localized within endoplasmic reticulum (ER) membranes and is important for the production of infectious particles. In this study, we analyzed the structural and functional features of NPHV p7 in addition to its role during virus assembly. Three-dimensional homology models for NPHV p7 using various nucle...
New insights on equid locomotor evolution from the lumbar region of fossil horses.
Proceedings. Biological sciences    April 29, 2016   Volume 283, Issue 1829 doi: 10.1098/rspb.2015.2947
Jones KE.The specialization of equid limbs for cursoriality is a classic case of adaptive evolution, but the role of the axial skeleton in this famous transition is not well understood. Extant horses are extremely fast and efficient runners, which use a stiff-backed gallop with reduced bending of the lumbar region relative to other mammals. This study tests the hypothesis that stiff-backed running in horses evolved in response to evolutionary increases in body size by examining lumbar joint shape from a broad sample of fossil equids in a phylogenetic context. Lumbar joint shape scaling suggests that st...
The role of relaxin in mare reproductive physiology: A comparative review with other species.
Theriogenology    April 21, 2016   Volume 86, Issue 1 451-456 doi: 10.1016/j.theriogenology.2016.04.061
Klein C.Relaxin is a peptide hormone best known for its action during the latter half of pregnancy, in particular for its softening effect on pelvic ligaments that aids in preparation of the birth canal for the impending delivery of the fetus. The source of relaxin during early pregnancy varies across species, with the CL being the main source in a number of species. The main source of relaxin during late equine pregnancy is the placenta. In mares with impaired placental function, circulating relaxin levels decline before abortion. During early pregnancy, relaxin promotes endometrial angiogenesis thro...
Trabecular bone of precocials at birth; Are they prepared to run for the wolf(f)?
Journal of morphology    April 20, 2016   Volume 277, Issue 7 948-956 doi: 10.1002/jmor.20548
Gorissen BM, Wolschrijn CF, van Vilsteren AA, van Rietbergen B, van Weeren PR.Bone is a dynamic tissue adapting to loading according to "Wolff's law of bone adaptation." During very early life, however, such a mechanism may not be adequate enough to adapt to the dramatic change in environmental challenges in precocial species. Their neonates are required to stand and walk within hours after birth, in contrast to altricial animals that have much more time to adapt from the intrauterine environment to the outside world. In this study, trabecular bone parameters of the talus and sagittal ridge of the tibia from stillborn but full-term precocials (calves and foals) were ana...
Comparative genomics of hormonal signaling in the chorioallantoic membrane of oviparous and viviparous amniotes.
General and comparative endocrinology    April 19, 2016   Volume 244 19-29 doi: 10.1016/j.ygcen.2016.04.017
Griffith OW, Brandley MC, Whittington CM, Belov K, Thompson MB.In oviparous amniotes (reptiles, birds, and mammals) the chorioallantoic membrane (CAM) lines the inside of the egg and acts as the living point of contact between the embryo and the outside world. In livebearing (viviparous) amniotes, communication during embryonic development occurs across placental tissues, which form between the uterine tissue of the mother and the CAM of the embryo. In both oviparous and viviparous taxa, the CAM is at the interface of the embryo and the external environment and can transfer signals from there to the embryo proper. To understand the evolution of placental ...
The origin of Chinese domestic horses revealed with novel mtDNA variants.
Animal science journal = Nihon chikusan Gakkaiho    April 13, 2016   Volume 88, Issue 1 19-26 doi: 10.1111/asj.12583
Yang Y, Zhu Q, Liu S, Zhao C, Wu C.The origin of domestic horses in China was a controversial issue and several hypotheses including autochthonous domestication, introduction from other areas, and multiple-origins from both introduction and local wild horse introgression have been proposed, but none of them have been fully supported by DNA data. In the present study, mitochondrial DNA (mtDNA) sequences of 714 Chinese indigenous horses were analyzed. The results showed that Chinese domestic horses harbor some novel mtDNA haplogroups and suggested that local domestication events may have occurred, but they are not the dominant ha...
An Overview of Ten Italian Horse Breeds through Mitochondrial DNA.
PloS one    April 7, 2016   Volume 11, Issue 4 e0153004 doi: 10.1371/journal.pone.0153004
The climatic and cultural diversity of the Italian Peninsula triggered, over time, the development of a great variety of horse breeds, whose origin and history are still unclear. To clarify this issue, analyses on phenotypic traits and genealogical data were recently coupled with molecular screening. Methods: To provide a comprehensive overview of the horse genetic variability in Italy, we produced and phylogenetically analyzed 407 mitochondrial DNA (mtDNA) control-region sequences from ten of the most important Italian riding horse and pony breeds: Bardigiano, Esperia, Giara, Lipizzan, Maremm...
Embryo aggregation does not improve the development of interspecies somatic cell nuclear transfer embryos in the horse.
Theriogenology    April 4, 2016   Volume 86, Issue 4 1081-1091 doi: 10.1016/j.theriogenology.2016.03.040
Gambini A, De Stéfano A, Jarazo J, Buemo C, Karlanian F, Salamone DF.The low efficiency of interspecies somatic cell nuclear transfer (iSCNT) makes it necessary to investigate new strategies to improve embryonic developmental competence. Embryo aggregation has been successfully applied to improve cloning efficiency in mammals, but it remains unclear whether it could also be beneficial for iSCNT. In this study, we first compared the effect of embryo aggregation over in vitro development and blastocyst quality of porcine, bovine, and feline zona-free (ZF) parthenogenetic (PA) embryos to test the effects of embryo aggregation on species that were later used as en...
Genetic variation between and within Triodontophorus brevicauda and Triodontophorus nipponicus revealed by analyses of mtDNA and rDNA gene sequences.
Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis    March 17, 2016   Volume 28, Issue 4 570-574 doi: 10.3109/24701394.2016.1157867
Duan H, Gao JF, Su X, Fu X, Yue DM, Gao Y, Qiu JH, Wang CR.Triodontophorus spp. parasitizes the large intestine of equine, causing strongylid diseases. The present study assessed genetic variation in five gene regions within and between Triodontophorus brevicauda and Triodontophorus nipponicus from Heilongjiang Province and the Inner Mongolia Autonomous region. The five gene markers were three mitochondrial (mt) genes, cytochrome c oxidase subunit I (cox1), NADH dehydrogenase subunit 5 (nad5), cytochrome b (cytb); and two ribosomal RNA genes, the internal transcribed spacer 1 (ITS1) and the internal transcribed spacer 2 (ITS2). Partial (p) sequences o...
Characterization of equine cytochrome P450: role of CYP3A in the metabolism of diazepam.
Journal of veterinary pharmacology and therapeutics    March 11, 2016   Volume 39, Issue 5 478-487 doi: 10.1111/jvp.12303
Nakayama SM, Ikenaka Y, Hayami A, Mizukawa H, Darwish WS, Watanabe KP, Kawai YK, Ishizuka M.Research on drug metabolism and pharmacokinetics in large animal species including the horse is scarce because of the challenges in conducting in vivo studies. The metabolic reactions catalyzed by cytochrome P450s (CYPs) are central to drug pharmacokinetics. This study elucidated the characteristics of equine CYPs using diazepam (DZP) as a model compound as this drug is widely used as an anesthetic and sedative in horses, and is principally metabolized by CYPs. Diazepam metabolic activities were measured in vitro using horse and rat liver microsomes to clarify the species differences in enzy...
Sequence heterogeneity in the 18S rRNA gene in Theileria equi from horses presented in Switzerland.
Veterinary parasitology    March 6, 2016   Volume 221 24-29 doi: 10.1016/j.vetpar.2016.03.003
Liu Q, Meli ML, Zhang Y, Meili T, Stirn M, Riond B, Weibel B, Hofmann-Lehmann R.A reverse line blot (RLB) hybridization assay was adapted and applied for equine blood samples collected at the animal hospital of the University of Zurich to determine the presence of piroplasms in horses in Switzerland. A total of 100 equine blood samples were included in the study. The V4 hypervariable region of the 18S rRNA gene was amplified by polymerase chain reaction and analyzed using the RLB assay. Samples from seven horses hybridized to a Theileria/Babesia genus-specific and a Theileria genus-specific probe. Of these, two hybridized also to the Theileria equi-specific probe. The oth...
Functionally relevant responses to human facial expressions of emotion in the domestic horse (Equus caballus).
Biology letters    February 13, 2016   Volume 12, Issue 2 20150907 doi: 10.1098/rsbl.2015.0907
Smith AV, Proops L, Grounds K, Wathan J, McComb K.Whether non-human animals can recognize human signals, including emotions, has both scientific and applied importance, and is particularly relevant for domesticated species. This study presents the first evidence of horses' abilities to spontaneously discriminate between positive (happy) and negative (angry) human facial expressions in photographs. Our results showed that the angry faces induced responses indicative of a functional understanding of the stimuli: horses displayed a left-gaze bias (a lateralization generally associated with stimuli perceived as negative) and a quicker increase in...
Positive selection in the SLC11A1 gene in the family Equidae.
Immunogenetics    February 4, 2016   Volume 68, Issue 5 353-364 doi: 10.1007/s00251-016-0905-2
Bayerova Z, Janova E, Matiasovic J, Orlando L, Horin P.Immunity-related genes are a suitable model for studying effects of selection at the genomic level. Some of them are highly conserved due to functional constraints and purifying selection, while others are variable and change quickly to cope with the variation of pathogens. The SLC11A1 gene encodes a transporter protein mediating antimicrobial activity of macrophages. Little is known about the patterns of selection shaping this gene during evolution. Although it is a typical evolutionarily conserved gene, functionally important polymorphisms associated with various diseases were identified in ...
Palisade Endings Are a Constant Feature in the Extraocular Muscles of Frontal-Eyed, But Not Lateral-Eyed, Animals.
Investigative ophthalmology & visual science    February 3, 2016   Volume 57, Issue 2 320-331 doi: 10.1167/iovs.15-18716
Blumer R, Maurer-Gesek B, Gesslbauer B, Blumer M, Pechriggl E, Davis-López de Carrizosa MA, Horn AK, May PJ, Streicher J, de la Cruz RR, Pastor ÁM.To test whether palisade endings are a general feature of mammalian extraocular muscles (EOMs). Methods: Thirteen species, some frontal-eyed (human, monkey, cat, and ferret), and others lateral-eyed (pig, sheep, calf, horse, rabbit, rat, mouse, gerbil, and guinea pig) were analyzed. Palisade endings were labeled by using different combinations of immunofluorescence techniques. Three-dimensional reconstructions of immunolabeled palisade endings were done. Results: In all frontal-eyed species, palisade endings were a consistent feature in the rectus EOMs. Their total number was high and they exh...
The benefits and limitations of animal models for translational research in cartilage repair.
Journal of experimental orthopaedics    January 6, 2016   Volume 3, Issue 1 1 doi: 10.1186/s40634-015-0037-x
Moran CJ, Ramesh A, Brama PA, O'Byrne JM, O'Brien FJ, Levingstone TJ.Much research is currently ongoing into new therapies for cartilage defect repair with new biomaterials frequently appearing which purport to have significant regenerative capacity. These biomaterials may be classified as medical devices, and as such must undergo rigorous testing before they are implanted in humans. A large part of this testing involves in vitro trials and biomechanical testing. However, in order to bridge the gap between the lab and the clinic, in vivo preclinical trials are required, and usually demanded by regulatory approval bodies. This review examines the in vivo models ...
The complete mitochondrial genome of Hequ horse.
Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis    December 18, 2015   Volume 27, Issue 6 4657-4658 doi: 10.3109/19401736.2015.1106489
Guo X, Pei J, Chu M, Wu X, Bao P, Ding X, Liang C, Yan P.The complete mitochondrial genome of Hequ horse was determined in this study. The mitogenome is 16 656 bp in length and contains 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a D-loop region. The overall base composition of the H-strand is 32.20% for A, 28.55% for C, 13.38% for G and 25.86% for T. Tree constructed using MEGA 6 with Maximum-likelihood (ML) methods demonstrated that Hequ horse was clustered in subfamily Equidae.
Clostridium difficile ribotypes in humans and animals in Brazil.
Memorias do Instituto Oswaldo Cruz    December 11, 2015   Volume 110, Issue 8 1062-1065 doi: 10.1590/0074-02760150294
Silva RO, Rupnik M, Diniz AN, Vilela EG, Lobato FC.Clostridium difficile is an emerging enteropathogen responsible for pseudomembranous colitis in humans and diarrhoea in several domestic and wild animal species. Despite its known importance, there are few studies about C. difficile polymerase chain reaction (PCR) ribotypes in Brazil and the actual knowledge is restricted to studies on human isolates. The aim of the study was therefore to compare C. difficile ribotypes isolated from humans and animals in Brazil. Seventy-six C. difficile strains isolated from humans (n = 25), dogs (n = 23), piglets (n = 12), foals (n = 7), calves (n = 7), one c...
Canine and Equine Mesenchymal Stem Cells Grown in Serum Free Media Have Altered Immunophenotype.
Stem cell reviews and reports    December 8, 2015   Volume 12, Issue 2 245-256 doi: 10.1007/s12015-015-9638-0
Clark KC, Kol A, Shahbenderian S, Granick JL, Walker NJ, Borjesson DL.Mesenchymal stem cell (MSC) therapy is being increasingly used to treat dogs and horses with naturally-occurring diseases. However these animals also serve as critical large animal models for ongoing translation of cell therapy products to the human market. MSC manufacture for clinical use mandates improvement in cell culture systems to meet demands for higher MSC numbers and removal of xeno-proteins (i.e. fetal bovine serum, FBS). While serum-free media (SFM) is commercially available, its affects on MSC phenotype and immunomodulatory functions are not fully known. The objective of this study...
Population Variation Reveals Independent Selection toward Small Body Size in Chinese Debao Pony.
Genome biology and evolution    December 3, 2015   Volume 8, Issue 1 42-50 doi: 10.1093/gbe/evv245
Kader A, Li Y, Dong K, Irwin DM, Zhao Q, He X, Liu J, Pu Y, Gorkhali NA, Liu X, Jiang L, Li X, Guan W, Zhang Y, Wu DD, Ma Y.Body size, one of the most important quantitative traits under evolutionary scrutiny, varies considerably among species and among populations within species. Revealing the genetic basis underlying this variation is very important, particularly in humans where there is a close relationship with diseases and in domestic animals as the selective patterns are associated with improvements in production traits. The Debao pony is a horse breed with small body size that is unique to China; however, it is unknown whether the size-related candidate genes identified in Western breeds also account for the...
Early pregnancy in the horse revisited – does exception prove the rule?
Journal of animal science and biotechnology    December 2, 2015   Volume 6 50 doi: 10.1186/s40104-015-0048-6
Aurich C, Budik S.Early equine pregnancy shares many features with that of more intensively assessed domestic animals species, but there are also characteristic differences. Some of those are poorly understood. Descent of the equine conceptus into the uterine lumen occurs at day 5 to 6 after ovulation but is only possible when the embryo secretes prostaglandin E2. Although maintenance of equine pregnancy probably involves secretion of a conceptus derived anti-luteolytic factor, this agent has not been identified. Rapid growth, conceptus mobility and presence of an acellular capsule at the time of maternal recog...
Comparison of Fecal Microbiota of Mongolian and Thoroughbred Horses by High-throughput Sequencing of the V4 Region of the 16S rRNA Gene.
Asian-Australasian journal of animal sciences    December 1, 2015   Volume 29, Issue 9 1345-1352 doi: 10.5713/ajas.15.0587
Zhao Y, Li B, Bai D, Huang J, Shiraigo W, Yang L, Zhao Q, Ren X, Wu J, Bao W, Dugarjaviin M.The hindgut of horses is an anaerobic fermentative chamber for a complex and dynamic microbial population, which plays a critical role in health and energy requirements. Research on the gut microbiota of Mongolian horses has not been reported until now as far as we know. Mongolian horse is a major local breed in China. We performed high-throughput sequencing of the 16S rRNA genes V4 hypervariable regions from gut fecal material to characterize the gut microbiota of Mongolian horses and compare them to the microbiota in Thoroughbred horses. Fourteen Mongolian and 19 Thoroughbred horses were use...
Tear film osmolality and electrolyte composition in healthy horses.
American journal of veterinary research    December 1, 2015   Volume 76, Issue 12 1066-1069 doi: 10.2460/ajvr.76.12.1066
Best LJ, Hendrix DV, Ward DA.To evaluate the tear film osmolality and electrolyte composition in healthy horses. Methods: 15 healthy adult horses. Methods: Each horse was manually restrained, and an ophthalmic examination, which included slit-lamp biomicroscopy, indirect ophthalmoscopy, and a Schirmer tear test, was performed. Tear samples were collected from both eyes with microcapillary tubes 3 times at 5-minute intervals. The tear samples for each horse were pooled, and the osmolality and electrolyte concentrations were measured. The mean (SD) was calculated for each variable to establish preliminary guidelines for tea...
Culicoides (Diptera: Ceratopogonidae) and livestock in the Netherlands: comparing host preference and attack rates on a Shetland pony, a dairy cow, and a sheep.
Journal of vector ecology : journal of the Society for Vector Ecology    November 28, 2015   Volume 40, Issue 2 308-317 doi: 10.1111/jvec.12169
Elbers AR, Meiswinkel R.Culicoides (Diptera: Ceratopogonidae) host preferences and attack rates were quantified in early summer at a dairy farm in the Netherlands using livestock tethered at pasture. Midges were aspirated hourly over seven consecutive hours (17:00-23:00) from a dairy cow, a Shetland pony, and a sheep and correspondingly yielded seventeen, thirteen, and nine species. Of the 14,181 midges obtained, approximately 95% belonged to the C. obsoletus complex, C. dewulfi, C. chiopterus, and C. punctatus that together include all proven or potential vectors for arboviral diseases in livestock in northwestern E...
A horse’s eye view: size and shape discrimination compared with other mammals.
Biology letters    November 26, 2015   Volume 11, Issue 11 20150701 doi: 10.1098/rsbl.2015.0701
Tomonaga M, Kumazaki K, Camus F, Nicod S, Pereira C, Matsuzawa T.Mammals have adapted to a variety of natural environments from underwater to aerial and these different adaptations have affected their specific perceptive and cognitive abilities. This study used a computer-controlled touchscreen system to examine the visual discrimination abilities of horses, particularly regarding size and shape, and compared the results with those from chimpanzee, human and dolphin studies. Horses were able to discriminate a difference of 14% in circle size but showed worse discrimination thresholds than chimpanzees and humans; these differences cannot be explained by visu...
Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments.
Proceedings of the National Academy of Sciences of the United States of America    November 23, 2015   Volume 112, Issue 50 E6889-E6897 doi: 10.1073/pnas.1513696112
Librado P, Der Sarkissian C, Ermini L, Schubert M, Jónsson H, Albrechtsen A, Fumagalli M, Yang MA, Gamba C, Seguin-Orlando A, Mortensen CD....Yakutia, Sakha Republic, in the Siberian Far East, represents one of the coldest places on Earth, with winter record temperatures dropping below -70 °C. Nevertheless, Yakutian horses survive all year round in the open air due to striking phenotypic adaptations, including compact body conformations, extremely hairy winter coats, and acute seasonal differences in metabolic activities. The evolutionary origins of Yakutian horses and the genetic basis of their adaptations remain, however, contentious. Here, we present the complete genomes of nine present-day Yakutian horses and two ancient specim...
Structural similarities of human and mammalian lipocalins, and their function in innate immunity and allergy.
Allergy    November 23, 2015   Volume 71, Issue 3 286-294 doi: 10.1111/all.12797
Jensen-Jarolim E, Pacios LF, Bianchini R, Hofstetter G, Roth-Walter F.Owners and their domestic animals via skin shedding and secretions, mutually exchange microbiomes, potential pathogens and innate immune molecules. Among the latter especially lipocalins are multifaceted: they may have an immunomodulatory function and, furthermore, they represent one of the most important animal allergen families. The amino acid identities, as well as their structures by superposition modeling were compared among human lipocalins, hLCN1 and hLCN2, and most important animal lipocalin allergens, such as Can f 1, Can f 2 and Can f 4 from dog, Fel d 4 from cats, Bos d 5 from cow's...
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