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Topic:Heritability

Heritability in horses refers to the proportion of observable variation in traits among individuals that can be attributed to genetic factors. It is a key concept in understanding how traits such as height, coat color, speed, and temperament are passed from one generation to the next. Heritability estimates help in predicting the potential for selective breeding and the likelihood of certain traits being expressed in offspring. These estimates are calculated using statistical methods that analyze the resemblance between relatives. This page aggregates peer-reviewed research studies and scholarly articles that explore the genetic basis of heritable traits in horses, the methodologies for estimating heritability, and the implications for equine breeding and management practices.
Genetics of swayback in American Saddlebred horses.
Animal genetics    November 26, 2010   Volume 41 Suppl 2 64-71 doi: 10.1111/j.1365-2052.2010.02108.x
Cook D, Gallagher PC, Bailey E.Extreme lordosis, also called swayback, lowback or softback, can occur as a congenital trait or as a degenerative trait associated with ageing. In this study, the hereditary aspect of congenital swayback was investigated using whole genome association studies of 20 affected and 20 unaffected American Saddlebred (ASB) Horses for 48,165 single-nucleotide polymorphisms (SNPs). A statistically significant association was identified on ECA20 (corrected P=0.017) for SNP BIEC2-532523. Of the 20 affected horses, 17 were homozygous for this SNP when compared to seven homozygotes among the unaffected ho...
Gene dropping analysis of ancestral contributions and allele survival in Japanese thoroughbred population.
Journal of equine science    October 22, 2010   Volume 21, Issue 3 39-45 doi: 10.1294/jes.21.39
Yamashita J, Oki H, Hasegawa T, Honda T, Nomura T.Genetic contributions of nine historically important ancestors and allelic diversity in the Japanese Thoroughbred population were examined by applying the gene dropping simulation to the foals produced from 1978 to 2005. Full pedigree records traced to ancestors (base animals) born around 1890 were used for the simulation. Alleles originated from some of the historically important ancestors were found to be at risk of future extinction, although their genetic contributions to the foal population have increased during the last three decades. The proportion of surviving alleles to the total alle...
Estimates of genetic parameters for conformation measures and scores in Finnhorse and Standardbred foals.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    September 14, 2010   Volume 127, Issue 5 395-403 doi: 10.1111/j.1439-0388.2010.00856.x
Schroderus E, Ojala M.The aim of this study was to estimate genetic parameters for conformation measures and scores in the Finnhorse and the Standardbred foals presented in foal shows. Studied traits included height at withers and at croup, six subjectively evaluated conformation traits and overall grade. Data were from 10-year period (1995-2004) and consisted of 5821 Finnhorse foals (1-3 years old) with 7644 records and 2570 Standardbred foals (1-2 years old) with 2864 records. Variance components were estimated with REML - animal model using VCE4 program. The model included age class, year of judging, sex and...
Estimation of genetic parameters for racing speed at different distances in young and adult Spanish Trotter horses using the random regression model.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    September 14, 2010   Volume 127, Issue 5 385-394 doi: 10.1111/j.1439-0388.2010.00865.x
Gómez MD, Menendez-Buxadera A, Valera M, Molina A.A total of 71 522 records (from 3154 horses) with the times per kilometre (TPK), recorded in Spanish Trotter horses (individual races) from racing performances held from 1991 to 2007, were available for this study. The TPK values for the different age groups (young and adult horses) and different distances (1600-2700 m) were considered as different traits, and a bi character random regression model (RRM) was applied to estimate the (co)variance components throughout the trajectory of age groups and distances. The following effects were considered as fixed: the combination of hippodrome-dat...
Patient variation in veterinary medicine: part I. Influence of altered physiological states.
Journal of veterinary pharmacology and therapeutics    June 19, 2010   Volume 33, Issue 3 213-226 doi: 10.1111/j.1365-2885.2009.01139.x
Martinez M, Modric S.In veterinary medicine, the characterization of a drug's pharmacokinetic (PK) properties is generally based upon data that are derived from studies that employ small groups of young healthy animals, often of a single breed. These are also the data from which population predictions are often generated to forecast drug exposure characteristics in the target population under clinical conditions of use. In veterinary medicine, it is rare to find information on the covariates that can influence drug exposure characteristics. Therefore, it is important to recognize some of the factors that can alter...
Modeling variance structure of body shape traits of Lipizzan horses.
Journal of animal science    May 21, 2010   Volume 88, Issue 9 2868-2882 doi: 10.2527/jas.2009-2453
Kaps M, Curik I, Baban M.Heterogeneity of variance of growth traits over age is a common issue in estimating genetic parameters and is addressed in this study by selecting appropriate variance structure models for additive genetic and environmental variances. Modeling and partitioning those variances connected with analyzing small data sets were demonstrated on Lipizzan horses. The following traits were analyzed: withers height, chest girth, and cannon bone circumference. The measurements were taken at birth, and at approximately 6, 12, 24, and 36 mo of age of 660 Lipizzan horses born in Croatia between 1948 and 2000....
Genetic variation in competition traits at different ages and time periods and correlations with traits at field tests of 4-year-old Swedish Warmblood horses.
Animal : an international journal of animal bioscience    May 1, 2010   Volume 4, Issue 5 682-691 doi: 10.1017/S1751731110000017
Viklund A, Braam A, Näsholm A, Strandberg E, Philipsson J.For many years, the breeding value estimation for Swedish riding horses has been based on results from Riding Horse Quality Tests (RHQTs) of 4-year-olds only. Traits tested are conformation, gaits and jumping ability. An integrated index including competition results is under development to both get as reliable proofs as possible and increases the credibility of the indexes among breeders, trainers and riders. The objectives of this study were to investigate the suitability of competition data for use in genetic evaluations of horses and to examine how well young horse performance agrees with ...
[Swiss warmblood horse with symptoms of hereditary equine regional dermal asthenia without mutation in the cyclophylin B gene (PPIB)].
Schweizer Archiv fur Tierheilkunde    April 3, 2010   Volume 152, Issue 4 188-192 doi: 10.1024/0036-7281/a000042
Rüfenacht S, Straub R, Steinmann B, Winand N, Bidaut A, Stoffel MH, Gerber V, Wyder M, Müller E, Roosje PJ.Hereditary equine dermal asthenia (HERDA) is an autosomal recessive skin disease that affects predominantly Quarter Horses and related breeds. Typical symptoms are easy bruising and hyperextensible skin on the back. The prognosis is guarded, as affected horses cannot be ridden normally and are often euthanised. In the Quarter Horse, HERDA is associated with a mutation in cyclophilin B (PPIB), an enzyme involved in triple helix formation of collagen. Here we describe the case of a Swiss Warmblood filly with symptoms of HERDA without PPIB-mutation and in which we also could exclude Ehlers-Danlos...
Increased parasite resistance and recurrent airway obstruction in horses of a high-prevalence family.
Journal of veterinary internal medicine    January 28, 2010   Volume 24, Issue 2 407-413 doi: 10.1111/j.1939-1676.2009.0465.x
Neuhaus S, Bruendler P, Frey CF, Gottstein B, Doherr MG, Gerber V.Equine recurrent airway obstruction (RAO) shares many characteristics with human asthma. In humans, an inverse relationship between susceptibility to asthma and resistance to parasites is suspected. Objective: Members of a high-incidence RAO half-sibling family (F) shed fewer strongylid eggs compared with RAO-unaffected pasture mates (PM) and that RAO-affected horses shed fewer eggs than RAO-unaffected half-siblings. Methods: Seventy-three F and 73 unrelated, age matched PM. Methods: Cases and controls kept under the same management and deworming regime were examined. Each individual was class...
The Relationship between Parental Coat Colour and Prize-winning Palominos.
Journal of equine science    January 19, 2010   Volume 20, Issue 4 73-77 doi: 10.1294/jes.20.73
Billington HE, McEwan NR.Although various combinations of parental coat colours can produce a Palomino foal, examination of records of the British Palomino Society suggest that many animals registered with the society resulted from matings which maximise the likelihood or even guarantee a Palomino foal. When show records were examined, it was clear that the colouration preferred by judges corresponds to that of the only pair-wise parental combination guaranteeing a Palomino foal.
Effects of inbreeding and other genetic components on equine fertility.
Animal : an international journal of animal bioscience    December 1, 2009   Volume 3, Issue 12 1662-1672 doi: 10.1017/S1751731109990553
Sairanen J, Nivola K, Katila T, Virtala AM, Ojala M.The Finnish mating records of Standardbred trotters (SB; n = 33 679) and Finnhorses (FH; n = 32 731) were analysed to study the effect of the level of inbreeding on foaling rates and to estimate the heritability of foaling rate. A linear mixed model was assumed, with the outcome of the foaling (foal or no foal) as the trait of the study. A restricted maximum likelihood-based method was used to calculate the estimates of the variance components. Predictions of breeding values and estimates of fixed effects were also calculated. The average level of inbreeding was 9.9% in the SB and 3.6% in the ...
Multi-trait animal model estimation of genetic parameters for linear type and gait traits in the Belgian warmblood horse.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    September 22, 2009   Volume 126, Issue 5 378-386 doi: 10.1111/j.1439-0388.2008.00798.x
Rustin M, Janssens S, Buys N, Gengler N.Genetic parameters for the height at withers, 27 linear type and six linear gait traits were estimated for the Belgian warmblood horse. Observations on 987 mares, mostly 3 years old, were analysed using a multi-trait animal model. The statistical model included appraiser, age and location (date x place of appraisal) as fixed effects. Genetic parameters were estimated using a canonical transformation and an expectation-maximization restricted maximum likelihood algorithm with an additional deceleration step. Estimates of heritability for the 33 linear traits were between 0.15 and 0.55. Heritabi...
Whole-genome scan for guttural pouch tympany in Arabian and German warmblood horses.
Animal genetics    August 24, 2009   Volume 40, Issue 6 917-924 doi: 10.1111/j.1365-2052.2009.01942.x
Zeitz A, Spötter A, Blazyczek I, Diesterbeck U, Ohnesorge B, Deegen E, Distl O.Equine guttural pouch tympany (GPT) is a hereditary disease in foals of several breeds, including thoroughbreds, Arabian, Quarter and warmblood horses. We performed a whole-genome scan for GPT in 143 horses from five Arabian and five German warmblood families and genotyped 257 microsatellites. Chromosome-wide significant linkage was detected on ECA2 and ECA15 using multipoint non-parametric linkage analyses. Analyses stratified by sex revealed chromosome-wide significant linkage on ECA2 for fillies and chromosome-wide significant linkage on ECA15 for colts. For Arabian colts, the quantitative ...
Mixed inheritance of equine recurrent airway obstruction.
Journal of veterinary internal medicine    August 4, 2009   Volume 23, Issue 3 626-630 doi: 10.1111/j.1939-1676.2009.0292.x
Gerber V, Baleri D, Klukowska-Rötzler J, Swinburne JE, Dolf G.Mode of inheritance of equine recurrent airway obstruction (RAO) is unknown. Objective: Major genes are responsible for RAO. Methods: Direct offspring of 2 RAO-affected Warmblood stallions (n = 197; n = 163) and a representative sample of Swiss Warmbloods (n = 401). Methods: One environmental and 4 genetic models (general, mixed inheritance, major gene, and polygene) were tested for Horse Owner Assessed Respiratory Signs Index (1-4, unaffected to severely affected) by segregation analyses of the 2 half-sib sire families, both combined and separately, using prevalences estimated in a representa...
Heritability of foot conformation and its relationship to sports performance in a Dutch Warmblood horse population.
Equine veterinary journal    May 8, 2009   Volume 41, Issue 2 139-143 doi: 10.2746/042516409x366130
Ducro BJ, Bovenhuis H, Back W.Warmblood horse studbooks aim to breed horses with a conformation that will enable elite future performance, but reduce the risk of injuries and lameness. Negative conformational traits, such as asymmetrical or 'uneven' forefeet would possibly diminish performance. Objective: To assess the prevalence and heritability of uneven feet and its genetic relationship to other conformation traits as well as to sporting performance later in life in Warmblood riding horses. Methods: The databases of the Royal Dutch Warmblood Studbook (KWPN, n = 44,840 horses) and Royal Dutch Equestrian Sports Federation...
Breeding value estimation in the Hungarian Sport Horse population.
Veterinary journal (London, England : 1997)    April 16, 2009   Volume 181, Issue 1 19-23 doi: 10.1016/j.tvjl.2009.03.006
Posta J, Komlósi I, Mihók S.The aims of this study were to estimate phenotypic and genetic parameters for a range of traits in Hungarian Sport Horses, and to compare several methods of estimating breeding value (BV) in this breed. The analyses were based on the Hungarian Sport Horse Studbook, results of self-performance tests (SPTs) and show-jumping competition results. An SPT comprises subjective judgement of conformation traits, movement analysis traits and free-jumping performance, assessed via ordinal scores. Genetic parameters of SPTs were estimated with an animal model. Different measurements of the competition per...
Sire x stud interaction for body measurement traits in Spanish Purebred horses.
Journal of animal science    April 9, 2009   Volume 87, Issue 8 2502-2509 doi: 10.2527/jas.2008-0841
Gómez MD, Goyache F, Molina A, Valera M.The mating policy for Spanish Purebred horses encourages the same or closely related stallions to be used for reproduction across studs differing in environments. Stallions may perform differently across studs, and if so, adjustment for the sire x stud (ss) interaction is recommended. However, there are no studies available that analyzed the influence of ss interaction on estimation of genetic parameters in horses. This research is aimed at assessing the implications of including ss interaction in models fitted for the estimation of genetic parameters for traits under selection using 8 body me...
[Assessment of hereditary defects and dispositions of the horse under animal welfare aspects].
Schweizer Archiv fur Tierheilkunde    April 1, 2009   Volume 151, Issue 4 153-158 doi: 10.1024/0036-7281.151.4.153
Mählmann Ch, Steiger A.Persons involved in equine breeding, namely veterinarians, horse breeders and breeding association judges, often lack of an apropriate consciousness about the relevance of heritability or supposed heritability of common horses diseases, which might play a distinctive role in the aetiology of numerous of these diseases. Executing animal welfare rights in equine breeding, the major concern should focus on an objective evaluation of pain, suffering and damages caused by different hereditary diseases. The basis of assessment for hygienic breeding has to be defi ned according to the actual animal w...
Genetic variables of various manifestations of osteochondrosis and their correlations between and within joints in Dutch warmblood horses.
Journal of animal science    February 11, 2009   Volume 87, Issue 6 1906-1912 doi: 10.2527/jas.2008-1199
van Grevenhof EM, Schurink A, Ducro BJ, van Weeren PR, van Tartwijk JM, Bijma P, van Arendonk JA.Osteochondrosis (OC) is an important orthopedic developmental disorder in many horse populations. A review of the literature revealed widely variable heritability estimates for the disorder. We estimated the genetic variables (heritabilities and genetic correlations) of various manifestations of OC. Femoropatellar, tarsocrural, and metacarpophalangeal and metatarsophalangeal joints of 811 randomly selected yearlings from the Royal Warmblood Studbook of The Netherlands, descending from 32 representative stallions, were scored for OC at 28 predilection sites. At each site, OC was scored in 5 cat...
Estimation of heritability for superficial digital flexor tendon injury by Gibbs sampling in the Thoroughbred racehorse.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    January 13, 2009   Volume 125, Issue 6 413-416 doi: 10.1111/j.1439-0388.2008.00758.x
Oki H, Miyake T, Kasashima Y, Sasaki Y.The superficial digital flexor tendon (SDFT) injury causes considerable wastage of racing Thoroughbreds. In this study, the heritability of SDFT injury of the forelimbs was estimated in the Thoroughbred racehorses based on the Bayesian analysis with Gibbs sampling using threshold animal models. New horse patients of SDFT injury at the age of 2-5 years accommodated in the training centers in 2005 were used for the analyses. Based on clinical data of 8198 horses, heritability of SDFT was estimated to be the order of 0.17 (posterior mode) to 0.19 +/- 0.05 (posterior mean +/- posterior SD).
Evaluation of allele frequencies of inherited disease genes in subgroups of American Quarter Horses.
Journal of the American Veterinary Medical Association    January 6, 2009   Volume 234, Issue 1 120-125 doi: 10.2460/javma.234.1.120
Tryon RC, Penedo MC, McCue ME, Valberg SJ, Mickelson JR, Famula TR, Wagner ML, Jackson M, Hamilton MJ, Nooteboom S, Bannasch DL.To estimate allele frequencies of the hyperkalaemic periodic paralysis (HYPP), lethal white foal syndrome (LWFS), glycogen branching enzyme deficiency (GBED), hereditary equine regional dermal asthenia (HERDA), and type 1 polysaccharide storage myopathy (PSSM) genes in elite performance subgroups of American Quarter Horses (AQHs). Methods: Prospective genetic survey. Methods: 651 elite performance AQHs, 200 control AQHs, and 180 control American Paint Horses (APHs). Methods: Elite performance AQHs successful in 7 competitive disciplines (barrel racing, cutting, halter, racing, reining, western...
Genetic parameters for traits evaluated at field tests of 3- and 4-year-old Swedish Warmblood horses.
Animal : an international journal of animal bioscience    December 1, 2008   Volume 2, Issue 12 1832-1841 doi: 10.1017/S1751731108003030
Viklund A, Thorén Hellsten E, Näsholm A, Strandberg E, Philipsson J.There are two types of 1-day field tests available for young Swedish Warmblood sport horses; one test for 3-year olds and one more advanced test for 4-year olds. Conformation, gaits and jumping ability are evaluated at both tests. Studies on various genetic parameters were based on about 20 000 tested horses. The data for 4-year olds consisted of 30 years of testing. The aims of the study were to estimate genetic parameters for results from different time periods, and to estimate heritabilities for, and genetic correlations between, traits scored in the two tests. The judgement of traits was s...
Multiple-trait selection for radiographic health of the limbs, conformation and performance in Warmblood riding horses.
Animal : an international journal of animal bioscience    December 1, 2008   Volume 2, Issue 12 1724-1732 doi: 10.1017/S1751731108003091
Stock KF, Distl O.Information on 26 434 German Warmblood horses born between 1992 and 2001 was used for multivariate genetic analyses of radiographic health, conformation and performance traits to compare different modes of single- and multiple-trait selection of sires. Results of standardized radiological examinations of 5155 Hanoverian Warmblood horses, conformation evaluations from studbook inspections of 20 603 mares, and performance evaluations from mare performance tests and auction horse inspections of 16 098 horses were used for multivariate genetic analyses. Genetic parameters were estimated with restr...
Frequency of the severe combined immunodeficiency disease gene among horses in Morocco.
Equine veterinary journal    November 26, 2008   Volume 40, Issue 6 590-591 doi: 10.2746/042516408x333001
Piro M, Benjouad A, Tligui NS, El Allali K, El Kohen M, Nabich A, Ouragh L.Severe combined immunodeficiency disease (SCID) of horses is an autosomal, recessive hereditary disease occurring among Arabian or crossbred Arabian horses. The genetic defect responsible was previously identified as a 5-base pair deletion in the gene encoding the catalytic subunit of the DNA dependant protein kinase (DNA-PKcs). This study was carried out to determine the frequency of SCID and identify horses carrying the gene for SCID among Arabian and Arabian crossbred stallions and mares in Morocco using a DNA-based test. Twenty-one horses were SCID carriers: 14 (7%) Arabians, 6 (4%) Arab-B...
Partial deletion of the LAMA3 gene is responsible for hereditary junctional epidermolysis bullosa in the American Saddlebred Horse.
Animal genetics    November 11, 2008   Volume 40, Issue 1 35-41 doi: 10.1111/j.1365-2052.2008.01795.x
Graves KT, Henney PJ, Ennis RB.Laminin 5 is a heterotrimeric basement membrane protein integral to the structure and function of the dermal-epidermal junction. It consists of three glycoprotein subunits: the alpha3, beta3 and gamma2 chains, which are encoded by the LAMA3, LAMB3 and LAMC2 genes respectively. A mutation in any of these genes results in the condition known as hereditary junctional epidermolysis bullosa (JEB). A 6589-bp deletion spanning exons 24-27 was found in the LAMA3 gene in American Saddlebred foals born with the skin-blistering condition epitheliogenesis imperfecta. The deletion confirms that this autoso...
Estimation of genetic parameters on conformation traits of the Iranian Arab horses population.
Pakistan journal of biological sciences : PJBS    September 27, 2008   Volume 11, Issue 2 280-284 doi: 10.3923/pjbs.2008.280.284
Gharahveysi S, Kashan NE, Gerami A, Torshizi RV.Arab horse is a popular pure breed in Iran and is registered by World Arabian Horse Organization (WAHO). There is no scientific study and research about this breed. In this research 13 conformation traits on a random sample of the Iranian Arab horses studied. The estimate of variance components estimated by Animal Model and Derivative Free Restricted Maximum Likelihood (DF-REML) approach and DF-REML software. Heritability of conformation traits is also evaluated. The range of estimated heritability were (0.050 +/- 0.008) neck length and (0.614 +/- 0.087) croup height. Results indicated that, c...
Heritability and repeatability of insect bite hypersensitivity in Dutch Shetland breeding mares.
Journal of animal science    September 12, 2008   Volume 87, Issue 2 484-490 doi: 10.2527/jas.2008-1129
Schurink A, van Grevenhof EM, Ducro BJ, van Arendonk JA.Insect bite hypersensitivity (IBH) is a seasonal recurrent allergic reaction of horses to the bites of certain Culicoides spp. and is found throughout the world. The aim of our study was to estimate the heritability and repeatability of IBH in the Dutch Shetland pony population. A total of 7,924 IBH scores on 6,073 mares were collected during foal inspections in 2003, 2005, and 2006. Mares were scored for clinical symptoms of IBH from June until February by 16 inspectors. Of all mares, 74.4% (n = 4,520) had a single observation, 20.7% (n = 1,255) had 2 observations, and 4.9% (n = 298) had 3 ob...
[Genetics of recurrent airway obstruction (RAO)].
DTW. Deutsche tierarztliche Wochenschrift    August 5, 2008   Volume 115, Issue 7 271-275 
Gerber V, Swinburne JE, Blott SC, Nussbaumer P, Ramseyer A, Klukowska-Rötzler J, Dolf G, Marti E, Burger D, Leeb T.Recurrent airway obstruction (RAO) is a multifactorial and polygenic disease. Affected horses are typically 7 years of age or older and show exercise intolerance, increased breathing effort, coughing, airway neutrophilia, mucus accumulation and hyperreactivity as well as cholinergic bronchospasm. The environmental factors responsible are predominantly allergens and irritants in haydust, but the immunological mechanisms underlying RAO are still unclear. Several studies have demonstrated a familiar predisposition for RAO and it is now proven that the disease has a genetic basis. In offspring, th...
[Hereditary diseases in the horse: II. Polygenetic or multifactorial diseases].
Schweizer Archiv fur Tierheilkunde    May 21, 2008   Volume 150, Issue 4 173-180 doi: 10.1024/0036-7281.150.4.173
Mele M, Ramseyer A, Burger D, Brehm W, Rieder S, Marti E, Straub R, Gerber V.Many of the important diseases of sport and pleasure horses are thought to have a genetic component. The majority of these diseases, however, are multifactorial and are influenced not only by genetics, but also by environmental factors. In this review some of the most important multifactorial diseases are described and the current evidence for a genetic background is discussed.
Genetic analysis of insect bite hypersensitivity (summer eczema) in Icelandic horses.
Animal : an international journal of animal bioscience    March 1, 2008   Volume 2, Issue 3 360-365 doi: 10.1017/S1751731107001413
Eriksson S, Grandinson K, Fikse WF, Lindberg L, Mikko S, Broström H, Frey R, Sundquist M, Lindgren G.There is a lack of knowledge about the genetic background of eczema due to insect bite hypersensitivity, also called summer eczema, in horses. The condition is known in several horse breeds and countries and it causes reduced welfare of the horse and economic losses to the owner. The aim of this study was to estimate genetic parameters for summer eczema in Swedish-born Icelandic horses. A questionnaire was sent to owners of horses sired by stallions with more than 50 offspring born in Sweden between 1991 and 2001. Variance components of summer eczema classified as healthy, mild, moderate or se...
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