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Topic:Microbiology

Microbiology and horses explores the interactions between microorganisms and equine hosts, focusing on the role of bacteria, viruses, fungi, and other microbes in horse health and disease. This field examines the microbial flora present in various equine environments, including the gastrointestinal tract, skin, and respiratory system, and investigates how these microorganisms influence equine physiology and pathology. Research in this area includes studies on microbial infections that affect horses, the development of antimicrobial resistance, and the impact of probiotics and prebiotics on equine health. This page compiles peer-reviewed research studies and scholarly articles that investigate the diversity, dynamics, and implications of microbial communities in horses, as well as the strategies for managing microbial-related diseases.
Testing for CEMO, Klebsiella pneumoniae and Pseudomonas aeruginosa.
The Veterinary record    September 29, 2011   Volume 169, Issue 13 333 doi: 10.1136/vr.d6028
No abstract available
Fungal microbiota from ocular conjuctiva of clinically healthy horses belonging to the military police cavalry of alagoas.
Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]    September 1, 2011   Volume 42, Issue 3 1151-1155 doi: 10.1590/S1517-838220110003000038
de Sousa ME, Araújo MA, Mota RA, Porto WJ, Souza AK, Dos Santos JL, da Silva PP.Normal fungal conjunctiva microbiota of horses remains stable in healthy animals, free from ocular and/or systemic diseases which may, eventually, cause ocular alterations. The knowledge of the fungal microbiota is of great importance due to the reduced number of studies reported in the literature and also to the large occurrence of ocular alterations, mainly keratomycosis, in these animals. The aim of this study was to isolate and to identify the fungi present in the ocular conjunctiva of healthy horses belonging to the Military Police Cavalry of Alagoas. Samples from both conjunctival sacks ...
Cross-sectional study of antimicrobial-resistant bacteria in horses. Part 1: Prevalence of antimicrobial-resistant Escherichia coli and methicillin-resistant Staphylococcus aureus.
Equine veterinary journal    August 18, 2011   Volume 44, Issue 3 289-296 doi: 10.1111/j.2042-3306.2011.00441.x
Maddox TW, Clegg PD, Diggle PJ, Wedley AL, Dawson S, Pinchbeck GL, Williams NJ.The increasing prevalence of antimicrobial-resistant bacteria such as methicillin-resistant Staphylococcus aureus (MRSA) and antimicrobial-resistant Escherichia coli represents a significant problem. However, the carriage of such bacteria by horses in the UK has not been well characterised. Objective: To estimate the prevalence of nasal carriage of MRSA and faecal carriage of antimicrobial-resistant E. coli amongst horses in the general equine community of the mainland UK. Methods: A cross-sectional study of horses recruited by 65 randomly selected equine veterinary practices was conducted, wi...
Alogomyces tanneri gen. et sp. nov., a chytrid in Lobulomycetales from horse manure.
Mycologia    August 9, 2011   Volume 104, Issue 1 157-163 doi: 10.3852/11-043
Simmons DR, Letcher PM, Powell MJ, Longcore JE.The order Lobulomycetales contains chytrids from soil, freshwater and marine habitats; environmental DNA sampling has indicated that representatives of this order might be found in deep ocean localities. We describe Alogomyces tanneri as the first lobulomycetalean chytrid isolated from horse manure; A. tanneri is also the first species in the order to possess a rumposome in its zoospore. This species widens the range of habitats, ultrastructural variation and thallus morphology for Lobulomycetales.
In vitro validation of the lactose 13C-ureide breath test for equine orocaecal transit time measurement.
Equine veterinary journal. Supplement    August 4, 2011   Issue 39 42-48 doi: 10.1111/j.2042-3306.2011.00406.x
Sutton DG, Preston T, Love S.Validation of a reliable, noninvasive clinical test for quantification of equine orocaecal transit time (OCTT) is required. This would facilitate an evidence-based approach to investigation and treatment of equine small intestinal disorders. Objective: 1) Comparison of the lactose (13) C-ureide breath test (LUBT) with the hydrogen breath test (H(2) BT) for OCTT measurement. 2) Identification of the characteristics of gastrointestinal microbial glycosylureide hydrolase activity in vitro. 3) Production of an optimised protocol for the LUBT for in vivo measurement of equine OCTT. Objective: Signi...
Latherin and other biocompatible surfactant proteins.
Biochemical Society transactions    July 27, 2011   Volume 39, Issue 4 1017-1022 doi: 10.1042/BST0391017
Kennedy MW.Horses and other equids are unusual in producing protein-rich sweat for thermoregulation, a major component of which is latherin, a highly surface-active, non-glycosylated protein that is a member of the PLUNC (palate, lung and nasal epithelium clone) family. Latherin produces a significant reduction in water surface tension at low concentrations (≤1 mg/ml), and probably acts as a wetting agent to facilitate evaporative cooling through a thick, waterproofed pelt. Latherin binds temporarily to hydrophobic surfaces, and so may also have a disruptive effect on microbial biofilms. It may conseq...
Solid-state anaerobic digestion of spent wheat straw from horse stall.
Bioresource technology    July 26, 2011   Volume 102, Issue 20 9432-9437 doi: 10.1016/j.biortech.2011.07.062
Cui Z, Shi J, Li Y.The spent wheat straw from horse stall bedding has lower cellulose and hemicellulose contents, but higher volatile fatty acid content than raw wheat straw. Biogas production from solid-state anaerobic digestion (SS-AD) of spent wheat straw and raw wheat straw was compared in this study. The SS-AD tests were conducted at 22% total solids (TS) content using inoculum from a liquid AD system at three feedstock-to-inoculum (F/I) ratios of 2.0, 4.0, and 6.0. Daily methane yields of spent wheat straw peaked 8 and 3 days earlier than those of raw wheat straw at F/I ratios of 2.0 and 4.0, respectively....
Streptococcus equi: a pathogen restricted to one host.
Journal of medical microbiology    July 14, 2011   Volume 60, Issue Pt 9 1231-1240 doi: 10.1099/jmm.0.028233-0
Waller AS, Paillot R, Timoney JF.Strangles caused by the host adapted Lancefield group C Streptococcus equi subspecies equi (S. equi) is a frequently diagnosed infectious disease of horses worldwide. Critical to the global success of S. equi is its ability to establish persistent infections within the guttural pouches of recovered apparently healthy horses that can result in transmission to in-contact animals. Recent research has identified key events in the S. equi genome, which occurred during its evolution from an ancestral strain of S. equi subspecies zooepidemicus, that may enhance its ability to evade host innate immune...
Faecal shedding of CTX-M-producing Escherichia coli in horses receiving broad-spectrum antimicrobial prophylaxis after hospital admission.
Veterinary microbiology    July 14, 2011   Volume 154, Issue 3-4 298-304 doi: 10.1016/j.vetmic.2011.07.005
Damborg P, Marskar P, Baptiste KE, Guardabassi L.The objective of this longitudinal study was to investigate the occurrence and genetic background of faecal Escherichia coli resistant to cefotaxime (CTX) in horses receiving broad-spectrum antimicrobial prophylaxis after admission to a veterinary teaching hospital. The ten horses enrolled in the study were treated with cefquinome either alone (n=4) or in combination with metronidazole (n=3) or other antimicrobial agents (n=3). CTX-resistant coliforms in faeces collected before, during and after treatment were quantified on selective MacConkey agar supplemented with CTX, and a colony isolated ...
The effect of environment on interferon-gamma production in neonatal foals.
Veterinary immunology and immunopathology    June 28, 2011   Volume 143, Issue 1-2 170-175 doi: 10.1016/j.vetimm.2011.06.030
Sun L, Adams AA, Page AE, Betancourt A, Horohov DW.While interferon-gamma (IFNγ) plays an important role in protection against viral and intracellular bacterial infections, its production in neonates is deficient. Exposure to environmental antigens can promote the maturation of the immune system of neonatal humans and mice. We hypothesize that exposure to high level of microbial components would increase the production of IFNγ in neonatal foals. To test this hypothesis, one group of foals was placed into stalls three times a week for 8 weeks. A second group of foals remained on pasture. Air samples were collected from the barn and pasture fo...
Intestinal ciliate composition found in the feces of the Turk rahvan horse Equus caballus, Linnaeus 1758.
European journal of protistology    June 8, 2011   Volume 47, Issue 4 245-255 doi: 10.1016/j.ejop.2011.04.005
Gürelli G, Göçmen B.Species composition and distribution of large intestinal ciliates were investigated in the feces from 15 Turk rahvan horses, living in the vicinity of Izmir, Turkey. Twenty-two ciliate genera consisting of 36 species were identified. This is the first report on intestinal ciliates in Turk rahvan horses and no previously unknown species were observed. The mean number of ciliates was 14.2±13.9×10(4) cells ml(-1) of feces and the mean number of ciliate species per host was 9.9±7.1. No ciliates were observed in 2 horses. Bundleia and Blepharocorys were considered to be the major genera since th...
Pathology in practice. Severe, chronic, segmental proliferative and ulcerative enteritis with intraepithelial curved bacilli (L intracellularis) and multifocal transmural necrosis.
Journal of the American Veterinary Medical Association    June 2, 2011   Volume 238, Issue 11 1417-1419 doi: 10.2460/javma.238.11.1417
Ellis AE, Hart KA, Elfenbein JR.No abstract available
Long-term effects of endurance training on total tract apparent digestibility, total mean retention time and faecal microbial ecosystem in competing Arabian horses.
Equine veterinary journal. Supplement    May 27, 2011   Issue 38 387-392 doi: 10.1111/j.2042-3306.2010.00188.x
Goachet AG, Varloud M, Philippeau C, Julliand V.In endurance horses, commonly fed 80% forage, energy is provided mainly by VFA produced in the hindgut during cell wall degradation, but cell wall digestibility has been reported to be impaired by exercise. Objective: To assess the influence of a long-term endurance conditioning on cell wall digestion in horses. Methods: The total tract apparent digestibility of dry matter, organic matter and fibrous constituents, solid and liquid total mean retention time and the faecal microbial ecosystem of purebred Arabian horses were measured for 2 years in 2 longitudinal experiments. Methods: Performed a...
Muscular microRNA expressions in healthy and myopathic horses suffering from polysaccharide storage myopathy or recurrent exertional rhabdomyolysis.
Equine veterinary journal. Supplement    May 27, 2011   Issue 38 303-310 doi: 10.1111/j.2042-3306.2010.00267.x
Barrey E, Bonnamy B, Barrey EJ, Mata X, Chaffaux S, Guerin G.MicroRNAs (miRNA) are small endogenous noncoding interfering RNA molecules (18-25 nucleotides) regarded as major regulators in eukaryotic gene expression. They play a role in developmental timing, cellular differentiation, signalling and apoptosis pathways. Because of the central function of miRNAs in the proliferation and differentiation of the myoblasts demonstrated in mouse and man, it is assumed that they could be present in equine muscles and their expression profile may be related to the muscle status. Objective: To identify miRNA candidates in the muscles of control and affected horses ...
Prevalence of methicillin-resistant Staphylococci on a farm: staff can harbour MRS when animals do not.
Zoonoses and public health    May 25, 2011   Volume 59, Issue 1 1-3 doi: 10.1111/j.1863-2378.2011.01413.x
Aquino Gde V, Maluta RP, de Ávila FA.The aim of this work was to establish the prevalence of methicillin-resistant Staphylococci (MRS) in the animals and staff of a teaching and research farm. Samples of dairy cattle (36), beef cattle (26), sheep (19), horses (21), pigs (23), goats (23) and humans (13) were collected and screened for the presence of MRS. The detection of mecA gene was performed by PCR to determine the resistance of the samples to methicillin. Antimicrobial-resistance testing to penicillin, meropenem, ceftriaxone, cephalothin, oxacillin, levofloxacin, enrofloxacin, chloramphenicol, ciprofloxacin, gentamicin, clind...
Methicillin-resistant Staphylococcus aureus in a population of horses in Australia.
Australian veterinary journal    May 21, 2011   Volume 89, Issue 6 221-225 doi: 10.1111/j.1751-0813.2011.00711.x
Axon JE, Carrick JB, Barton MD, Collins NM, Russell CM, Kiehne J, Coombs G.To evaluate if methicillin-resistant Staphylococcus aureus (MRSA) is present in the horse population in Australia. Methods: A two-part retrospective study of laboratory submissions of microbial culture results from horses. Methods: Part A: medical records of 216 horses that had MRSA screening performed on nasal swabs collected over a 30-day period at admission to the Scone Equine Hospital Clovelly Intensive Care Unit were retrieved. Part B: laboratory records from 2004 to 2009 of culture submissions to the Scone Veterinary Laboratory were reviewed and cultures that grew MRSA were identified. T...
Presence and distribution of fungi and bacteria in the reproductive tract of healthy stallions.
Theriogenology    May 6, 2011   Volume 76, Issue 3 464-470 doi: 10.1016/j.theriogenology.2011.02.023
Rota A, Calicchio E, Nardoni S, Fratini F, Ebani VV, Sgorbini M, Panzani D, Camillo F, Mancianti F.A saprophytic bacterial flora is present on the penis and the distal part of the urethra of stallions. Little is known about the fungal flora of their reproductive tract. As micro organisms play an important role in mares fertility, the aim of the study was to describe the distribution of fungi and bacteria in the normal genital apparatus of stallions. The microbic flora of the reproductive tract of 11 healthy, fertile stallions was evaluated, collecting samples from 5 different locations: urethral fossa, penis/internal lamina of the prepuce, urethra pre- and post-ejaculation, and semen. For f...
Conjunctival bacterial and fungal flora in healthy horses in the UK.
Veterinary ophthalmology    April 28, 2011   Volume 14, Issue 3 195-199 doi: 10.1111/j.1463-5224.2010.00867.x
Johns IC, Baxter K, Booler H, Hicks C, Menzies-Gow N.To describe the bacterial and fungal flora of the normal conjunctiva of horses in the UK; to determine the effect of horse age, sex, geographic location, and housing on this flora; and to determine the most appropriate antimicrobial drug(s) for prophylactic treatment of corneal ulcers. Methods: A total of 60 adult healthy horses were studied. Methods: Swabs of the conjunctiva were obtained from 60 horses housed in two locations within the UK. Specimens were cultured for aerobic bacteria and fungi, and sensitivity against six ophthalmic antimicrobials assessed. The effect of age, sex, location ...
Prevalence of Clostridium difficile in horses.
Veterinary microbiology    April 22, 2011   Volume 152, Issue 1-2 212-215 doi: 10.1016/j.vetmic.2011.04.012
Medina-Torres CE, Weese JS, Staempfli HR.Fecal samples were collected to establish the apparent prevalence of Clostridium difficile shedding in Standardbred and Thoroughbred racehorses housed at 4 racetracks and 2 breeding facilities, and in horses admitted to a referral large animal clinic. Forty-one (7.59%) of 540 racetrack horses, seven (5.83%) of 120 breeding farm horses, and four (4.88%) out of 82 horses admitted to the referral clinic were culture-positive for C. difficile. An overall fecal culture prevalence of 7.01% for C. difficile was identified in 742 fecal samples. PCR-ribotyping and toxin gene identification was performe...
Mortierella wolfii keratomycosis in a horse.
Veterinary ophthalmology    April 19, 2011   Volume 14, Issue 4 267-270 doi: 10.1111/j.1463-5224.2011.00891.x
Wada S, Ode H, Hobo S, Niwa H, Katayama Y, Takatori K.To describe a case of superficial keratomycosis caused by Mortierella wolfii (M. wolfii) in a horse. Methods: A thoroughbred filly was presented with painful right eye of 2 days' duration. A superficial corneal ulcer was observed ventrally together with multifocal punctuate opacities axially. Samples were collected by swabbing and scraping the ulcerated lesion and submitted for microbiologic and cytologic examination. Results: Microscopic evaluation of debrided corneal tissue revealed the presence of nonseptate fungal hyphae, and culture of a corneal swab yielded fungal growth. Medical treat...
Isolation and characterization of β-haemolytic-Streptococci from endometritis in mares.
Veterinary microbiology    April 16, 2011   Volume 152, Issue 1-2 126-130 doi: 10.1016/j.vetmic.2011.04.009
Casagrande Proietti P, Bietta A, Coppola G, Felicetti M, Cook RF, Coletti M, Marenzoni ML, Passamonti F.The objective of this manuscript was to validate published PCR-based methods for detection of β-haemolytic Streptococci by comparison with established bacteriological techniques using 85 clinical isolates recovered from uterine swabs of mares with clinical signs of endometritis and to determine the distribution of SeeL/SeeM and SzeL/SzeM superantigens in isolates of Streptococcus equi subsp. equi (S. equi) and S. equi subsp. zooepidemicus (S. zooepidemicus). The conventional bacteriological techniques showed the vast majority of these isolates (78) were S. zooepidemicus with just 5 Streptococ...
Environmental methicillin-resistant Staphylococcus aureus in a veterinary teaching hospital during a nonoutbreak period.
Vector borne and zoonotic diseases (Larchmont, N.Y.)    March 21, 2011   Volume 11, Issue 6 609-615 doi: 10.1089/vbz.2010.0181
Hoet AE, Johnson A, Nava-Hoet RC, Bateman S, Hillier A, Dyce J, Gebreyes WA, Wittum TE.Concurrent to reports of zoonotic and nosocomial transmission of methicillin-resistant Staphylococcus aureus (MRSA) in veterinary settings, recent evidence indicates that the environment in veterinary hospitals may be a potential source of MRSA. The present report is a cross-sectional study to determine the prevalence of MRSA on specific human and animal contact surfaces at a large veterinary hospital during a nonoutbreak period. A total of 156 samples were collected using Swiffers(®) or premoistened swabs from the small animal, equine, and food animal sections. MRSA was isolated and identifi...
Beta 2 toxigenic Clostridium perfringens type A colitis in a three-day-old foal. Hazlett MJ, Kircanski J, Slavic D, Prescott JF.Beta 2 (β2)-toxigenic Clostridium perfringens type A was recovered in large numbers from the intestine of a neonatal foal with colitis. The foal had been treated with gentamicin. Necropsy revealed marked distension of cecum and colon with watery, rust-colored homogeneous fluid and gastric infarction. Microscopic colonic lesions were superficial necrosis of 50% of the colonic mucosal surface and scattered 1-3-mm ulcers with subjacent neutrophilic infiltration and large Gram-positive bacilli in the necrotic mucosa. Beta-2 toxin was demonstrated in the lesions by immunohistochemical staining.
Genetic diversity of Actinobacillus lignieresii isolates from different hosts.
Acta veterinaria Scandinavica    February 8, 2011   Volume 53, Issue 1 6 doi: 10.1186/1751-0147-53-6
Kokotovic B, Angen Ø, Bisgaard M.Genetic diversity detected by analysis of amplified fragment length polymorphisms (AFLPs) of 54 Actinobacillus lignieresii isolates from different hosts and geographic localities is described. On the basis of variances in AFLP profiles, the strains were grouped in two major clusters; one comprising strains isolated from horses and infected wounds of humans bitten by horses and another consisting of strains isolated from bovine and ovine hosts. The present data indicate a comparatively higher degree of genetic diversity among strains isolated from equine hosts and confirm the existence of a sep...
Dynamic host-bacteria interactions during an acidotic state induction.
Environmental microbiology reports    February 1, 2011   Volume 3, Issue 1 101-105 doi: 10.1111/j.1758-2229.2010.00193.x
Rudi K.Mainly due to the lack of time-series data, we know very little about the underlying interactions leading to adverse states in the gut. I therefore investigate the host-bacteria dynamic interactions in a recently published acidotic state induction time-series experiment. Too high levels of fermentation in the hindgut may lead to elevated serum lactate levels, which is a characteristic of the acidotic state. The acidotic state was induced through injection of oligofructose directly into the caecum of five horses, with subsequent temporal measurements of host serum lactate, and a range of caecum...
Genome sequence of Taylorella equigenitalis MCE9, the causative agent of contagious equine metritis.
Journal of bacteriology    January 28, 2011   Volume 193, Issue 7 1785 doi: 10.1128/JB.01547-10
Hébert L, Moumen B, Duquesne F, Breuil MF, Laugier C, Batto JM, Renault P, Petry S.Taylorella equigenitalis is the causative agent of contagious equine metritis (CEM), a sexually transmitted infection of horses. We herein report the genome sequence of T. equigenitalis strain MCE9, isolated in 2005 from the urethral fossa of a 4-year-old stallion in France.
Acquired antimicrobial resistance in equine Rhodococcus equi isolates.
The Veterinary record    January 21, 2011   Volume 168, Issue 4 101a doi: 10.1136/vr.c5289
Boyen F, Pasmans F, Haesebrouck F.No abstract available
Identification of Arcanobacterium haemolyticum isolated from postcastrational complications of a horse.
Folia microbiologica    January 21, 2011   Volume 55, Issue 6 666-668 doi: 10.1007/s12223-010-0108-4
Hijazin M, Ulbegi-Mohyla H, Alber J, Lämmler C, Hassan AA, Prenger-Berninghoff E, Weiss R, Zschöck M.An Arcanobacterium haemolyticum strain isolated from a postcastrational lesion of a horse was identified phenotypically and genotypically. The latter was performed by sequencing the 16S-23S rDNA intergenic spacer region (ISR), by amplification of the gene encoding A. haemolyticum phospholipase D, by amplification of A. haemolyticum specific parts of ISR-23S rDNA and by amplification of the newly described CAMP factor family protein encoding gene of A. haemolyticum. This indicates (as described previously for seven additional A. haemolyticum strains; Hassan et al. 2009) that A. haemolyticum see...
Microbiology of equine wounds and evidence of bacterial biofilms.
Veterinary microbiology    January 11, 2011   Volume 150, Issue 1-2 152-159 doi: 10.1016/j.vetmic.2011.01.003
Westgate SJ, Percival SL, Knottenbelt DC, Clegg PD, Cochrane CA.Horse wounds have a high risk of becoming infected due to their environment. Infected wounds harbour diverse populations of microorganisms, however in some cases these microorganisms can be difficult to identify and fail to respond to antibiotic treatment, resulting in chronic non-healing wounds. In human wounds this has been attributed to the ability of bacteria to survive in a biofilm phenotypic state. Biofilms are known to delay wound healing, principally due to their recalcitrance towards antimicrobial therapies and components of the innate immune response. This study describes the presenc...
In vivo confocal microscopy of equine fungal keratitis.
Veterinary ophthalmology    January 5, 2011   Volume 14, Issue 1 1-9 doi: 10.1111/j.1463-5224.2010.00822.x
Ledbetter EC, Irby NL, Kim SG.To describe in vivo corneal confocal microscopy of horses with fungal keratitis and correlate findings with clinical, histopathological, and microbiological evaluations of clinical cases and an ex vivo experimental equine fungal keratitis model. Methods: A total of 12 horses with naturally-acquired fungal keratitis and ex vivo equine corneas experimentally infected with clinical fungal isolates. Methods: Horses with naturally-acquired fungal keratitis were examined with a modified Heidelberg Retina Tomograph II and Rostock Cornea Module. Confocal microscopy images of clinical isolates of Asper...
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