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Topic:Disease Diagnosis

Disease diagnosis in horses involves the identification and characterization of illnesses through various diagnostic methods and tools. This process is essential for effective veterinary care and management of equine health. Techniques used in diagnosing diseases in horses include clinical examinations, laboratory tests, imaging modalities such as ultrasonography and radiography, and molecular diagnostics. Blood tests are frequently utilized to assess parameters such as complete blood count and biochemical profiles, which can indicate underlying health issues. Additionally, advancements in genetic testing and biomarker identification have enhanced the ability to detect specific diseases early. This page aggregates peer-reviewed research studies and scholarly articles that explore diagnostic methodologies, their applications, and their impact on equine health management.
Development and application of a focused ultrasound protocol in neonatal foals.
Veterinary journal (London, England : 1997)    December 27, 2025   Volume 315 106543 doi: 10.1016/j.tvjl.2025.106543
Ellero N, Maggi A, Busoni V, Imposimato I, Castagnetti C, Lanci A, Mariella J, Freccero F.This study aimed to develop a standardized ultrasound (US) protocol using selected thoracic and abdominal acoustic windows, to assess its feasibility and applicability in healthy foals, and to evaluate its usefulness for detecting common thoracic and abdominal conditions in sick foals. The Focused US (FUS) protocol included 12 thoraco-abdominal windows (4 right-side, 3 ventral, 5 left-side) using a curved-array probe. It was applied to cohorts of healthy (n = 17) and sick (n = 23) foals by a veterinary clinician with limited US experience. The FUS showed good feasibility and applicabil...
Equine leptospiral pulmonary haemorrhage syndrome: An atypical manifestation of equine leptospirosis.
Equine veterinary journal    December 26, 2025   Volume 58, Issue 2 458-465 doi: 10.1002/evj.70138
Decoster C, Lefère L, Raes E, van Loon G, Dufourni A.Leptospirosis is a widespread zoonotic, infectious disease associated with abortion, stillbirth, as well as liver and kidney failure. Leptospiral Pulmonary Haemorrhage Syndrome (LPHS) has increasingly been reported in human and canine patients infected by Leptospira and is associated with a high fatality rate. In equine medicine, pulmonary haemorrhage has mainly been described in foals with leptospiral infections, but rarely in adult horses. Objective: To characterise the clinicopathological features of pulmonary haemorrhage as a distinct disease entity in adult horses with leptospirosis, term...
Chronic hepatitis in horses with persistent equine hepacivirus infection.
Equine veterinary journal    December 25, 2025   Volume 58, Issue 2 444-457 doi: 10.1111/evj.70124
Jager MC, Luethy D, Shallop S, Cathcart J, Divers TJ, Tan JY, Beasley EM, Johnson P, Leduc L, Smith C, Jamieson CA, Magdesian KG, Van de Walle GR....Equine hepacivirus (EqHV) is closely related to hepatitis C virus (HCV), which causes persistent infection and chronic hepatitis in people. Information on persistent EqHV infection and hepatitis is limited. Objective: To report 19 cases of chronic hepatitis and persistent EqHV infection. Methods: Mixed retrospective and prospective case series. Methods: Inclusion criteria were: (1) chronic hepatitis, defined as persistently increased serum liver biomarkers, increased serum liver biomarkers accompanied by histopathological evidence of chronicity, for example, fibrosis, or both; (2) positive ser...
Identification of a novel equine rhinitis B virus detected in horse from Japan.
The Journal of veterinary medical science    December 23, 2025   Volume 88, Issue 3 535-543 doi: 10.1292/jvms.25-0379
Ketphan W, Sato M, Tsujimura K, Mizutani T, Takemae H.Equine rhinitis B virus (ERBV), a member of the Picornaviridae family, is associated with mild to moderate respiratory illness in horses, yet its genomic diversity remains incompletely characterized. In this study, we performed metagenomic analysis on a rectal swab sample from a diarrheic foal confirmed to be positive for rotavirus A. Unexpectedly, we identified a highly divergent ERBV strain with a 9,448-nucleotide genome encoding a 2,721-amino-acid polyprotein. Sequence analysis revealed only 62.5-63.1% identity in the polyprotein and 47.1-49.8% in the VP1 region compared to known ERBV serot...
Potassium carbonate as an alternative solution for detecting Anoplocephalid eggs in horse faecal samples.
BMC veterinary research    December 22, 2025   Volume 22, Issue 1 30 doi: 10.1186/s12917-025-05226-5
Girisgin O, Gülegen E, Girisgin AO, Cirak VY.Anoplocephalid species are responsible for causing tapeworm infection in horses. The disease may cause serious health issues, including discomfort, colic, and even intestinal perforation and death. A study was carried out to compare the detection rates of tapeworm eggs in naturally infected horses using two different examination solutions. For this purpose, faecal samples of 241 horses were examined with a combined sedimentation + centrifugation + flotation technique using saturated sugar solution (specific gravity (SG) = 1.30) as the basis and potassium carbonate (KCO) solution (S...
First Detection and Phylogenetic Analysis of Equine Hepacivirus (EqHV) in Iran.
Veterinary medicine and science    December 20, 2025   Volume 12, Issue 1 e70737 doi: 10.1002/vms3.70737
Pourmahdi Borujeni M, Ghobadian Diali H, Mashhadi AG, Aliabad MJ.The recent identification of novel viruses associated with hepatitis in horses has prompted equine veterinarians to investigate the viral factors contributing to equine hepatitis. Hepacivirus equi (EqHV), a member of the Flaviviridae family within the Hepacivirus genus, has been detected in horses affected by hepatitis. Globally, EqHV is highly conserved, existing as a single genotype with three distinct subtypes (Subtypes 1-3). Numerous studies have detected the virus by PCR and identified EqHV-specific antibodies through serological tests in different regions worldwide. However, to the best ...
PCR-RFLP method applied for identification of Warmblood Fragile Foal Syndrome carriers in Polish warmblood horses.
Polish journal of veterinary sciences    December 19, 2025   Volume 28, Issue 4 663-666 doi: 10.24425/pjvs.2025.157280
Kamiński S, Bejda J, Lewczuk D.The method for identifying the causative mutation for Warmblood Fragile Foal Syndrome (WFFS) involved PCR amplification of a 259-base pair fragment of the PLOD1 gene and its digestion with the restriction enzyme Aci I was developed, allowing for the clear detection of WFFS carriers. Eight WFFS carriers were detected among 308 warmblood horses kept in different farms across Poland, giving an overall frequency of 2.59%, which indicates a rather low frequency of the causative mutation for WFFS in Poland. Further research should be conducted on a larger number of horses, particularly those breeds ...
Metabolomic analysis of synovial fluid from healthy and pathological equine joints and tendon sheaths using high-resolution 1H Nuclear Magnetic Resonance.
Frontiers in veterinary science    December 16, 2025   Volume 12 1671176 doi: 10.3389/fvets.2025.1671176
Guadalupi M, Girelli CR, Della Tommasa S, Corte FD, Crovace AM, Fanizzi FP, Brehm W, Lacitignola L.Joint and tendon sheath diseases are a major cause of lameness and reduced performance in horses. Synovial fluid composition changes in response to pathological processes and metabolomic profiling offers a promising approach to detect these alterations. While equine joint metabolomics has been explored, little is known about the metabolomic profile of tendon sheaths. This study aimed to characterize and compare the synovial fluid metabolomic profiles of healthy and pathological joints and tendon sheaths in horses using high-resolution H Nuclear Magnetic Resonance spectroscopy, and to identify ...
First documented case of equine brucellosis in Libya: a case report.
Journal of equine science    December 16, 2025   Volume 36, Issue 4 129-132 doi: 10.1294/jes.36.129
Hiblu MA, Ahmed MO.This case report documents the first identified Brucella infection in a 6-year-old male Thoroughbred horse in Libya. The horse exhibited muscle and joint pain, inflammation over the shoulders with a pulpy texture (fistulous withers), stress, fatigue, and potential systemic infection. Its diagnosis was confirmed through serological testing, with agglutination titers of 1/80 for B. melitensis and 1/160 for B. abortus, and a blood culture revealing Gram-negative coccobacilli. After 3 weeks of combination therapy with rifampicin and doxycycline, the inflammation resolved, systemic signs disappeare...
Cyclooxygenase-2 and von Willebrand factor-an immunohistochemical study of the equine foot with and without laminitis, post-mortem perfused with paraffin oil.
Frontiers in veterinary science    December 15, 2025   Volume 12 1673415 doi: 10.3389/fvets.2025.1673415
Underberg BA, Van der Vekens E, Drews B, Kaessmeyer S.Equine laminitis is a complex and potentially fatal disease characterized by severe vascular and inflammatory alterations within the equine foot. This study aimed to develop immunohistochemistry (IHC) protocols for the detection of cyclooxygenase-2 (COX-2) and von Willebrand factor (vWF) in equine feet with and without laminitis, post-mortem perfused with paraffin oil. Unassigned: A total of 12 equine forelimbs from 8 horses were utilized in this study, divided into two study cohorts: one with laminitis and the other as a non-laminitis control. To develop the IHC protocols thoroughly, the tiss...
Genomic insights into the epidemiology of Contagious Equine Metritis in Germany.
Veterinary microbiology    December 11, 2025   Volume 312 110839 doi: 10.1016/j.vetmic.2025.110839
Harpke M, Brangsch H, Melzer F.In Germany, Contagious Equine Metritis (CEM) is a persistent problem in equine populations. The often subclinical nature of the disease, which is caused by the bacterium Taylorella equigenitalis, poses a problem for the breeding industry. However, there is a lack of knowledge about the genomic diversity of the pathogen in Germany, as studies on the genome level are lacking. Thus, in this study we sequenced 63 T. equigenitalis isolates from a strain collection and contemporary clinical isolates from before 2007-2024. Most of these isolates came from Icelandic horses in southern Germany. Based...
Mycobacterium avium subsp. hominissuis infection in horses with granulomatous enterocolitis – first report in Poland.
Journal of veterinary research    December 10, 2025   Volume 69, Issue 4 545-552 doi: 10.2478/jvetres-2025-0067
Nowicka B, Łopuszyński W, Krajewska-Wędzina M, Biazik A, Sobuś M, Polkowska I, Szacawa E.Gastrointestinal mycobacteriosis in horses is difficult to diagnose because of the pathogen's intracellular nature and the non-specific clinical symptoms. Effective accurate diagnosis facilitates prognosis and treatment. Current diagnostic procedures and methods of collecting material do not permit definitive antemortem diagnosis. However, culturing, acid-fast bacilli staining, histopathology, PCR and immunological marker evaluation may prove useful. Unassigned: Three horses were admitted to a clinic for intensive care and a final diagnosis. Physical examination and additional tests were perfo...
Detection and phylogenetic relationship of Neorickettsia risticii in horses from Southern Rio Grande do Sul, Brazil.
Journal of equine veterinary science    December 8, 2025   Volume 156 105749 doi: 10.1016/j.jevs.2025.105749
Silva JG, Martins KR, Rahal NM, Schuch LFD, Cunha RC, Meireles MCA.Neorickettsia risticii, an obligate intracellular bacterium, is the causative agent of Potomac Horse Fever (PHF) - a systemic, acute, and potentially fatal diarrheal disease. This pathogen is an endosymbiont of digenetic trematodes, with freshwater snails playing a role in its biological cycle. The disease exhibits endemic and seasonal patterns, primarily affecting horses in wetlands during warmer months, and has been documented in the United States, Canada, Europe, and South America. Previous studies confirmed the pathogen's presence in herds from southern Brazil via serology and PCR; however...
Evaluation of Risk Determinants and Molecular Characterisation for Non-Primate Hepacivirus Infection in Turkish Horses.
Pathogens (Basel, Switzerland)    December 8, 2025   Volume 14, Issue 12 1256 doi: 10.3390/pathogens14121256
Atasoy MO, Turan T, Özbek R, Işıdan H, Naggar RFE, Afify AF, Rohaim MA.The genus (HCV) has long been a dynamic group, increasing its number by myriads of species collectively referred to as non-primate hepaciviruses (NPHVs). NPHV exhibits a broad hepatotropism and is often attributed to chronic infection in horses and dogs. However, recent studies and meta-analyses on NPHV in horses have remained inconclusive regarding the determination of risk factors for infection. Therefore, our main goal was to investigate the frequencies and molecular characteristics of NPHV infection linked to geographical location, horse breeds, genders, and ages. For this purpose, we tes...
A case of Setaria equina in a 13-year-old, UK-resident mare.
Veterinary parasitology, regional studies and reports    December 4, 2025   Volume 67 101400 doi: 10.1016/j.vprsr.2025.101400
Healy SR, Yaffy D, Miller HG.Setaria equina is a species of filarial nematode parasite transmitted by mosquitoes, which infects horses and other equids. Adult worms reside in the abdominal cavity with apparently little pathogenic significance, but larvae can migrate to other regions of the body with resulting clinical disease. Cases in the UK are rare, with the last published report in 2001. A recent case of S. equina infection was detected in a 13-year-old, UK-resident mare during postmortem examination in Hertfordshire, UK. Adult worms were collected from the abdominal cavity, their DNA extracted and subjected to PCR an...
Whole genome sequencing and phylogenetic analysis of the equine infectious anemia virus associated with 2017 Spain outbreaks.
BMC veterinary research    December 4, 2025   Volume 22, Issue 1 10 doi: 10.1186/s12917-025-05100-4
In 2017, Spain reported its first equine infectious anemia virus (EIAV) outbreak in 34 years, affecting three horses in two unrelated holdings in Candeleda (Ávila) and Serradilla (Cáceres), with no apparent epidemiological link between premises. Phylogenetic analysis of whole genome and the gene revealed that the Spanish EIAV strains form a distinct monophyletic clade, sharing more than 99% nucleotide identity, suggesting a common contamination event. Interestingly, these three viral strains seem to cluster with North American strains, sharing up to 80.12% nucleotide identity, notably with ...
A modern AI framework integrating deep imputation, synthetic data balancing, and explainable modeling for survival prediction in horse colic.
Annals of anatomy = Anatomischer Anzeiger : official organ of the Anatomische Gesellschaft    December 4, 2025   Volume 264 152767 doi: 10.1016/j.aanat.2025.152767
Ozger ZB, Cihan P, Ozaydin I.Artificial intelligence (AI) has emerged as one of the most transformative tools for developing clinical decision-support systems in veterinary medicine. Despite its growing use, its full potential remains underutilized in equine medicine, an area of both high economic and clinical importance. Accurate survival prediction in horses with colic is crucial for timely intervention and improved clinical outcomes. Methods: This study aimed to predict survival outcomes in horse colic cases by developing models that combine traditional machine-learning algorithms (XGBoost, Light Gradient Boosting Mach...
A novel dataset of 2,362 equine fecal microbiomes from veterinary teaching hospitals across three countries reveals effects of geography and disease.
Animal microbiome    December 3, 2025   Volume 7, Issue 1 124 doi: 10.1186/s42523-025-00493-x
McAdams ZL, Campbell EJ, Dorfmeyer RA, Turner G, Shaffer S, Ford T, Lawson J, Terry J, Raju M, Coghill L, Cresci L, Lascola K, Pridgen T....Horses and other equids are reliant on the gut microbiome for health, and studies have reported associations between certain clinical conditions and features of the fecal microbiome. However, research to date on the equine fecal microbiome has often relied on small sample sizes collected from single and relatively localized geographic regions. Previous work also largely employs single timepoint analyses, or horses selected based on limited health criteria. Results: To address these limitations and expand our understanding of the core microbiome in health, and the changes associated with advers...
Histomorphometric characterization of the endometrium in mules (Equus mulus): An approach to endometritis/endometrosis.
Animal reproduction science    December 2, 2025   Volume 284 108056 doi: 10.1016/j.anireprosci.2025.108056
Mules (Equus mulus), as sterile hybrids between mares and donkeys, present a unique uterine morphology and physiology that remains poorly characterized. This study provides the first histomorphometric evaluation and transcriptional profiling of the endometrium in adult mules. To achieve this, endometrial biopsies were analysed using quantitative stereology, histological classification (Kenney-Doig system), and qPCR of key immune-related and fibrotic genes. Histometric analyses revealed that the stratum spongiosum was the predominant component of the mule endometrium (mean volume density: 84.7...
Treatment evaluation using ultrasonographic scanning of the spleen in Arabian horses affected by babesiosis.
Open veterinary journal    November 30, 2025   Volume 15, Issue 11 5799-5805 doi: 10.5455/OVJ.2025.v15.i11.35
Almaqhawi AA, El-Jalii IM, Al-Sabi MNS, Al-Ali A, Khalid AM, Abduljawad M, Shawaf T.Equine babesiosis is a widespread protozoan disease in Saudi Arabia. The most common finding of clinical babesiosis is splenomegaly, which can be detected using non-invasive splenic ultrasonography. Unassigned: This study aimed to investigate changes in the spleen size in horses infected with babesiosis using ultrasonography before and after treatment. Unassigned: This study employed 15 male and female Arabian horses. Each animal was examined clinically for clinical signs, and blood samples were collected in plain tubes to detect antibodies against . The spleens of healthy and affected horses ...
Equine infectious anemia in Brazilian equestrian tourism horses: serological, molecular, and biochemical assessment showing high EIAV seroprevalence and elevated gamma-glutamyl transferase (GGT) levels.
Veterinary research communications    November 27, 2025   Volume 50, Issue 1 52 doi: 10.1007/s11259-025-10993-5
Costa VMD, de Aguiar Filho RN, Braz GF, Paz CFR, Drumond BP, Teixeira BM, Kroon EG.Equine infectious anemia (EIA) is a chronic disease caused by the equine infectious anemia virus (EIAV), a member of the Retroviridae family and the Lentivirus genus. Most infected animals are asymptomatic carriers, which makes clinical diagnosis challenging. This study aimed to conduct a clinical and laboratory evaluation of EIA in equids used for equestrian tourism in Jericoacoara National Park, Ceará, Brazil. A total of 112 equids (104 horses and 8 mules) underwent clinical, hematological, biochemical, serological, and molecular assessments. The EIAV seropositivity rates were 11.6% by AGID...
Modification and Validation of a Reference Real-Time RT-PCR Method for the Detection of a New African Horse Sickness Virus Variant.
Microorganisms    November 25, 2025   Volume 13, Issue 12 2684 doi: 10.3390/microorganisms13122684
Morales J, Ruano MJ, Tena-Tomás C, van Schalkwyk A, Loundras EA, Valero-Lorenzo M, López-Herranz A, Romito M, Batten C, Villalba R, Agüero M.African horse sickness (AHS) is a disease affecting equids caused by the AHS virus (AHSV). The World Organisation for Animal Health (WOAH) includes AHS as a notifiable disease and, upon detection within the European Union, immediate control and eradication measures are mandated. Thus, validated diagnostic methods for rapid AHSV detection are essential. The Agüero 2008 and Guthrie 2013 rRT-PCR methods have been widely validated for detection of any AHSV strain and are included as reference rRT-PCRs in the WOAH manual. However, the WOAH Reference Laboratory for AHS in the Republic of South Afri...
Umbilical cord torsion abortion: the gross and histological features of affected umbilical cords and fetal membranes.
Theriogenology    November 21, 2025   Volume 252 117771 doi: 10.1016/j.theriogenology.2025.117771
Lawson JM, Verheyen KL, Laroucau K, Bryan JS, Smith KC, Foote AK, de Mestre AM.Umbilical cord torsion (UCT) is the most frequent pathology of the equine umbilical cord (UC) and a prominent cause of abortion, yet objective data on its features remain limited. This study compared UCT with clinically normal pregnancies (CNP) to (i) identify gross and histological features of the UC and fetal membranes, (ii) determine whether UCT is associated with fetal growth restriction, and (iii) rule out infectious aetiologies. Gross and histological features of the UC, chorioallantois and amnion were compared between groups. Fetal weight and crown-rump length were analysed relative to ...
Computed tomographic myelography of the cranial cervical vertebral column in unaffected Warmblood horses – comparison of transverse vertebral ratios in the flexed and neutral cranial cervical vertebral column.
Journal of equine veterinary science    November 20, 2025   Volume 156 105735 doi: 10.1016/j.jevs.2025.105735
Hellige M, Schröder C, Seehusen F, Rohn K, Geburek F.Computed tomographic myelography (CTM) is diagnostic for extradural spinal cord compression but knowledge about vertebral ratios from transverse images in flexion and normal position of unaffected horses is lacking. Objective: To compare the ratios of the cross-sectional areas (CSAs) of the spinal cord, the vertebral canal and of the contrast enhanced dural tube on transverse CTM images at C3-C4 in neutral and flexed positions in unaffected Warmbloods. Methods: CTM was performed in 13 neurologically unaffected Warmbloods in neutral and flexed cervical vertebral column positions. Ratios were ca...
Synovial Fluid and Serum MicroRNA Signatures in Equine Osteoarthritis.
International journal of molecular sciences    November 19, 2025   Volume 26, Issue 22 11190 doi: 10.3390/ijms262211190
Castanheira CIGD, Taylor S, Skiöldebrand E, Rubio-Martinez LM, Hackl M, Clegg PD, Peffers MJ.The aim of this study was to identify differentially expressed microRNAs (miRNAs) in serum and synovial fluid (SF) samples of control horses and those with osteoarthritis (OA) to identify potential candidates for biomarkers of disease. Total RNA was extracted from serum and SF samples of control (n = 4) and OA (n = 9) horses and sequenced. Differential expression analysis, pathway analysis and miRNA target prediction were performed. A group of six miRNAs (eca-miR-199a-3p, eca-miR-148a, eca-miR-99b, eca-miR-146a, eca-miR-423-5p and eca-miR-23b) was selected for validation in an independent coho...
Correction: Integrated molecular and serological survey of Rhodococcus equi in horses from three regions of Kazakhstan.
Frontiers in veterinary science    November 17, 2025   Volume 12 1734084 doi: 10.3389/fvets.2025.1734084
Zanilabdin M, Ilgekbayeva G, Otarbayev B, Nissanova R, Mussayeva G, Takai S, Suzuki Y, Kakuda T, Kurman S, Kassymov Y, Valiyeva B.[This corrects the article DOI: 10.3389/fvets.2025.1650186.].
Review of animal leishmaniosis in Jordan: An alarming discovery with implications for public health and animal welfare.
Veterinary parasitology, regional studies and reports    November 15, 2025   Volume 66 101382 doi: 10.1016/j.vprsr.2025.101382
Hananeh W, Al Rukibat R, Hammad H, Mukbel R.Leishmaniosis is an endemic parasitic infection in Jordan and the Middle East. Despite the endemicity of leishmaniosis in Jordan and frequently reported humancases, no singleclinical case has been documented in animals throughout the country. This report documents the first two animal Leishmania cases in two different animal species with a current literature review. Cutaneous leishmaniosis was diagnosed in an adult horse that presented with multiple variably sized skin nodules, some of which ulcerated. Visceral leishmaniosis was diagnosed in a stray dog. Cytological, histopathological, and mol...
A novel kirkovirus may be associated with equine gastrointestinal disease.
Equine veterinary journal    November 14, 2025   Volume 58, Issue 2 414-422 doi: 10.1111/evj.70121
Haywood LMB, Clark A, Hause B, Sheahan B.Many cases of equine enterocolitis are suspected to be infectious in nature, but no pathogen is identified in many cases. Objective: Perform next-generation sequencing on faeces collected from cases of equine enterocolitis for the presence of novel viruses and determine if an identified novel virus is associated with cases of equine enterocolitis. Methods: Retrospective cohort study. Methods: Next generation sequencing was performed targeting viral genomes from n = 13 pooled faecal samples (n = 5 horses/pool) with enterocolitis. Subsequent qPCR was performed targeting the highly conser...
Fibrocartilaginous Emboli in a 15-Year-Old Pony Mare.
Veterinary medicine and science    November 14, 2025   Volume 11, Issue 6 e70699 doi: 10.1002/vms3.70699
Kyle-LaBell E, Andersson A, Baughman B.Fibrocartilaginous embolic myelopathy (FCE) was diagnosed in a 15-year-old pony mare by histopathologic examination of the spinal cord. The horse was euthanized and submitted for necropsy following focal seizures and lateral recumbency for approximately 12 h. Histopathology of spinal cord segments C5-C7 revealed severe ischemic myelomalacia with intravascular amorphous material that stained positive with Alcian Blue, consistent with cartilaginous matrix. These features in addition to the acute onset of clinical signs are characteristic for FCE. This case report describes the clinical and histo...
Genomic epidemiology of strains currently and formerly classified as Enterobacter spp. recovered from equine necropsy samples.
PloS one    November 13, 2025   Volume 20, Issue 11 e0333701 doi: 10.1371/journal.pone.0333701
Harel B, Sévin C, Le Hello S, Moreau P, Giard JC, Petry S, Gravey F.Enterobacteriaceae are opportunistic pathogens responsible for local or systemic infections in both human and veterinary medicine. To monitor circulating strains in stud farms in Normandy (France), we investigated a collection of Enterobacteriaceae isolated from necropsied equids performed in the region between 1997 and 2020. These strains were initially identified using MALDI-TOF; however, as this method failed to identify some isolates, whole genome sequencing followed by rMLST analysis was subsequently performed. Different genera were identified: Enterobacter spp., Huaxiibacter spp., Lellio...