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Topic:Endangered Species

The topic of endangered species and horses explores the intersection of conservation efforts and equine populations that are at risk of extinction. This area of study focuses on identifying horse breeds and wild equine species whose numbers have declined significantly due to factors such as habitat loss, climate change, and human activities. It examines the genetic diversity, population dynamics, and conservation strategies aimed at preserving these at-risk groups. The topic includes research on the ecological roles of these horses, their historical significance, and the challenges involved in their conservation. This page compiles peer-reviewed research studies and scholarly articles that investigate the status, threats, and preservation efforts related to endangered horse species and breeds.
Hormone-responsive organoids from domestic mare and endangered Przewalski’s horse endometrium.
Reproduction (Cambridge, England)    October 29, 2020   Volume 160, Issue 6 819-831 doi: 10.1530/REP-20-0266
Thompson RE, Johnson AK, Dini P, Turco MY, Prado TM, Premanandan C, Burton GJ, Ball BA, Whitlock BK, Pukazhenthi BS.The endometrium, the inner uterine lining, is composed of cell layers that come in direct contact with an embryo during early pregnancy and later with the fetal placenta. The endometrium is responsible for signals associated with normal reproductive cyclicity as well as maintenance of pregnancy. In the mare, functionally competent in vitro models of the endometrium have not been successful. Furthermore, the ability to study various reproductive processes in vitro may allow critical evaluation of signaling pathways involved in the reproductive diseases of animals that cannot be handled frequent...
Factors Affecting Embryo Recovery Rate, Quality, and Diameter in Andalusian Donkey Jennies.
Animals : an open access journal from MDPI    October 26, 2020   Volume 10, Issue 11 doi: 10.3390/ani10111967
Dorado J, Bottrel M, Ortiz I, Díaz-Jiménez M, Pereira B, Consuegra C, Carrasco JJ, Gómez-Arrones V, Domingo A, Hidalgo M.Embryo transfer and the vitrification of embryos could be used for the conservation and recovery of endangered donkey breeds. It is important to develop techniques that optimize recovery rates and the cryotolerance of donkey embryos. This study evaluates factors affecting the recovery rate, quality, and diameter of embryos obtained from donor jennies as a starting point for the use of vitrification and embryo transfer in the conservation of the Andalusian donkey. A total of 100 embryos were recovered out of 124 estrous cycles (80.6%). The donor jenny affected the rates of positive flushings (P...
Genetic variation and selection in the major histocompatibility complex Class II gene in the Guizhou pony.
PeerJ    September 18, 2020   Volume 8 e9889 doi: 10.7717/peerj.9889
Liu C, Lei H, Ran X, Wang J.The Guizhou pony (GZP) is an indigenous species of equid found in the mountains of the Guizhou province in southwest China. We selected four regions of the equine leukocyte antigen (ELA), including , , and and used them to assess the diversity of the major histocompatibility complex (MHC) class II gene using direct sequencing technology. had the lowest / ratio (0.560) compared with the other three loci, indicating that was conserved and could be conserved after undergoing selective processes. Nine , five , nine and seven codons were under significant positive selection at the antigen b...
Horse ooplasm supports in vitro preimplantation development of zebra ICSI and SCNT embryos without compromising YAP1 and SOX2 expression pattern.
PloS one    September 11, 2020   Volume 15, Issue 9 e0238948 doi: 10.1371/journal.pone.0238948
Gambini A, Duque Rodríguez M, Rodríguez MB, Briski O, Flores Bragulat AP, Demergassi N, Losinno L, Salamone DF.Several equids have gone extinct and many extant equids are currently considered vulnerable to critically endangered. This work aimed to evaluate whether domestic horse oocytes support preimplantation development of zebra embryos obtained by intracytoplasmic sperm injection (ICSI, zebroid) and cloning, and to study the Hippo signaling pathway during the lineage specification of trophectoderm cells and inner cell mass cells. We first showed that zebra and horse sperm cells induce porcine oocyte activation and recruit maternal SMARCA4 during pronuclear formation. SMARCA4 recruitment showed to be...
A Genetic Window on Sardinian Native Horse Breeds through Uniparental Molecular Systems.
Animals : an open access journal from MDPI    September 1, 2020   Volume 10, Issue 9 1544 doi: 10.3390/ani10091544
Sardinia, an island located to the west of Italy in the Mediterranean Sea, boasts three native horse breeds: Giara, Sarcidano, and Sardinian Anglo-Arab. Here, we have investigated for the first time three loci of the non-recombining region of the Y chromosome (NRY) in 34 stallions from these breeds and performed a phylogenetic analysis of the maternal relationships among 178 previously published mitochondrial control regions. We found that the current NRY diversity of Sardinian horse breeds is linked to three haplotypes (HT), all identified within Sarcidano. Each breed showed a typical HT: HT1...
Engage with animal welfare in conservation.
Science (New York, N.Y.)    August 9, 2020   Volume 369, Issue 6504 629-630 doi: 10.1126/science.aba7271
Sekar N, Shiller D.No abstract available
Embryo technologies in donkeys (Equus Asinus).
Theriogenology    July 1, 2020   Volume 156 130-137 doi: 10.1016/j.theriogenology.2020.06.041
Panzani D, Fanelli D, Camillo F, Rota A.In industrialized countries, the donkey population had a dramatic decrease during the last century and this has brought almost all European donkey breeds to risk. Embryo technologies have already been employed as a tool for the conservation of endangered equid species (e.g. Equus Przewalskii). Today it is possible to obtain pregnancies after the transfer of donkey embryos in synchronized recipients, even though embryo transfer is not widely used as a reproductive technique in this species. So far, very few foals are born after transfer of cryopreserved embryos. To date, no pregnancies have bee...
Supportive techniques to investigate in vitro culture and cryopreservation efficiencies of equine ovarian tissue: A review.
Theriogenology    July 1, 2020   Volume 156 296-309 doi: 10.1016/j.theriogenology.2020.06.043
Aguiar FLN, Gastal GDA, Alves KA, Alves BG, Figueiredo JR, Gastal EL.During the reproductive lifespan of a female, only a limited quantity of oocytes are naturally ovulated; therefore, the mammalian ovary possesses a substantial population of preantral follicles available to be handled and explored in vitro. Hence, the manipulation of preantral follicles enclosed in ovarian tissue aims to recover a considerable population of oocytes of high-value animals for potential application in profitable assisted reproductive technologies (ARTs). For this purpose, the technique of preantral follicle in vitro culture (IVC) has been the most common research tool, achievin...
Genetic Diversity and Signatures of Selection in a Native Italian Horse Breed Based on SNP Data.
Animals : an open access journal from MDPI    June 8, 2020   Volume 10, Issue 6 1005 doi: 10.3390/ani10061005
Ablondi M, Dadousis C, Vasini M, Eriksson S, Mikko S, Sabbioni A.Horses are nowadays mainly used for sport and leisure activities, and several local breeds, traditionally used in agriculture, have been exposed to a dramatic loss in population size and genetic diversity. The loss of genetic diversity negatively impacts individual fitness and reduces the potential long-term survivability of a breed. Recent advances in molecular biology and bioinformatics have allowed researchers to explore biodiversity one step further. This study aimed to evaluate the loss of genetic variability and identify genomic regions under selection pressure in the Bardigiano breed ba...
Evaluating Ultrasound as a Noninvasive Technique for Investigating Anatomical Variations of the Equine Nuchal Ligament Lamellae.
Journal of equine veterinary science    April 8, 2020   Volume 90 103017 doi: 10.1016/j.jevs.2020.103017
May-Davis S, Gee C, Brown WY.Ultrasound is a well-established modality in equine investigative and diagnostic procedures. Although to date, it has not been utilized in examining the attachments of the equine nuchal ligament lamellae (NLL) onto the cervical vertebrae, for which a noninvasive technique is currently lacking. This study presents a standardized methodology for investigating the equine NLL using ultrasonography, and further evaluates the ultrasound images against postmortem dissection in two nonrelated horses. The ultrasound images in both horses clearly presented the attachment points of the NLL to the dorsal ...
Gut Microbiomes of Endangered Przewalski’s Horse Populations in Short- and Long-Term Captivity: Implication for Species Reintroduction Based on the Soft-Release Strategy.
Frontiers in microbiology    March 12, 2020   Volume 11 363 doi: 10.3389/fmicb.2020.00363
Tang L, Li Y, Srivathsan A, Gao Y, Li K, Hu D, Zhang D.Captivity maybe the only choice for survival of many endangered vertebrates, and understanding its broad effects is important for animal management and conservation, including breeding endangered species for subsequent release. Extreme environmental changes during captivity may influence survival ability in the wild. Captivity decreases gut bacterial diversity in a wide range of animals. However, most studies directly compare animals living in captivity with those in the wild, and there is a lack of understanding of effects of gradient shift in lifestyle during species reintroduction based on ...
Decreased genetic diversity in Kiso horses revealed through annual microsatellite genotyping.
The Journal of veterinary medical science    March 9, 2020   Volume 82, Issue 4 503-540 doi: 10.1292/jvms.19-0535
Nakamura M, Tozaki T, Kakoi H, Nakamura K, Rajabi-Toustani R, Ohba Y, Matsubara T, Takasu M.The Kiso horse is native to Japan and is on the verge of extinction. Here, we used microsatellites to characterize changes in their genetic diversity over time. We divided a population of Kiso horses that genotyped during 2007-2017 into three groups based on birth year: Group 1, 1980-1998 (70 horses); Group 2, 1999-2007 (61 horses); and Group 3, 2008-2017 (42 horses). We genotyped 31 microsatellites to calculate average number of alleles, observed heterozygosity, and expected heterozygosity. All indicators decreased across age groups. The results indicate that Kiso horses have been experiencin...
Molecular sexing and preliminary assessment of population sex ratio of the endangered Malayan tapir (Tapirus indicus) in Peninsular Malaysia.
Scientific reports    March 4, 2020   Volume 10, Issue 1 3973 doi: 10.1038/s41598-020-60552-y
Lim QL, Tan YL, Ng WL, Yong CSY, Ismail A, Rovie-Ryan JJ, Rosli N, Annavi G.A molecular sexing method by polymerase chain reaction (PCR) amplification of a portion of the sex-determining region Y (SRY) and the zinc finger (ZF) gene, as well as six equine Y-chromosome-specific microsatellite markers, were tested in the Malayan tapir (Tapirus indicus). While the microsatellite markers did not yield any male-specific amplicons for sex-typing, the SRY/ZF marker system produced reliable molecular sexing results by accurately sex-typing 31 reference Malayan tapirs, using whole blood, dried blood spot (DBS), or tissue samples as materials for DNA extraction. The marker syste...
SNPs analysis of height traits in Ningqiang pony.
Animal biotechnology    February 24, 2020   Volume 32, Issue 5 566-572 doi: 10.1080/10495398.2020.1728288
Bai H, Lu H, Wang L, Wang S, Zeng W, Zhang T.Ningqiang pony is one of the five pony breeds in China and is listed as a rare species. It is, therefore, meaningful to conduct stature research on this breed for its efficient reproduction, utilization and protection. This study is based on four SNP variants of adjacent LCORL/NCAPG, HMGA2, ZFAT and LASP1 genes, which have been found to be associated with horse height, and then, the 4 SNP loci in 22 Ningqiang ponies were analyzed. The results showed that there were genetic variations at the four loci in Ningqiang pony, there was a SNP on LCORL/NCAPG, HMGA2 and ZFAT gene all including T allele ...
Drug Efficacy of Ivermectin Against Primary Nematodes Parasitizing Captive Przewalski’s Horse (Equus Ferus Przewalskii) after Ten Years of Annually Treatment.
Helminthologia    January 25, 2020   Volume 57, Issue 1 57-62 doi: 10.2478/helm-2020-0004
Tang L, Xiu Y, Yan L, Cui Y, Ma X, Ente M, Zhang Y, Li K, Zhang D.Reintroduction of endangered species to natural habitat is considered as an important tool for conservation. The effect of drug management on captive population of reintroduced species is largely neglected. Decreased drug efficacy could pose a substantial threat to health of animals. More importantly, captive population without proper drug administration could act as transmission medium of resistance nematodes to wild population, making it important to delay the occurrence of drug resistance in captive population. Ivermectin have been used in captive Przewalski's horse () to eradicate intestin...
Challenges on the conservation of traditional orchards: Tree damage as an indicator of sustainable grazing.
Journal of environmental management    December 23, 2019   Volume 257 110010 doi: 10.1016/j.jenvman.2019.110010
López-Sánchez A, Perea R, Roig S, Isselstein J, Schmitz A.Traditional orchard meadows are among the most valuable cultural and agricultural systems for nature conservation in Europe. They comprise scattered fruit trees over a highly diverse herbaceous layer and provide a wide range of ecosystem services. However, they are strongly endangered due to farmland intensification and abandonment. Livestock grazing is known to promote grassland diversity but it may also cause tree damage through debarking. In this study, we evaluated the effect of different grazers (cattle, horse and sheep) on fruit trees in 42 traditional orchards of the Rhenish uplands (Ge...
Ancient Genomes Reveal Unexpected Horse Domestication and Management Dynamics.
BioEssays : news and reviews in molecular, cellular and developmental biology    December 6, 2019   Volume 42, Issue 1 e1900164 doi: 10.1002/bies.201900164
Orlando L.The horse was essential to past human societies but became a recreational animal during the twentieth century as the world became increasingly mechanized. As the author reviews here, recent studies of ancient genomes have revisited the understanding of horse domestication, from the very early stages to the most modern developments. They have uncovered several extinct lineages roaming the far ends of Eurasia some 4000 years ago. They have shown that the domestic horse has been significantly reshaped during the last millennium and experienced a sharp decline in genetic diversity within the last...
Investigation of biochemical and physiological parameters of the newborn Saiga antelope (Saiga tatarica) in Gansu Province, China.
PloS one    November 26, 2019   Volume 14, Issue 11 e0224822 doi: 10.1371/journal.pone.0224822
Liu X, Mawolo JB, Du X, Zhou Y, Wang H, Liu F, He Z, Marela HA.The Saiga antelope (Saiga tatarica) is a critically endangered species, and there has been limited success in restoring the population by captive breeding. This study assessed the biochemical and physiological parameters of newborn Saiga antelope to provide reference information that can be used to evaluate their health. Comparisons have been made with parameters for horses and closely related members of the Bovidae family but there are no reference values for the newborn Saiga antelope. Biochemical and physiological parameters were measured in 61 animals. An automatic analyzer (Hitachi Ltd. 7...
Horse phenotyping based on video image analysis of jumping performance for conservation breeding.
PeerJ    August 9, 2019   Volume 7 e7450 doi: 10.7717/peerj.7450
Lewczuk D, Metera-Zarzycka E.Many horse breeds in the world are reserved as genetic resources; however, their characteristics seem to be insufficiently clarified, especially in terms of horse performance. Two jumping ability evaluation methods have been used to compare different types of performance breeds and on this basis their applicability for precision phenotyping has been determined. Methods: Jumping data of 186 young Polish Warmblood stallions (27 with an endangered status) bred for sport and multipurpose use was collected during their performance tests organised under identical environmental conditions following t...
Community Composition and Diversity of Intestinal Microbiota in Captive and Reintroduced Przewalski’s Horse (Equus ferus przewalskii).
Frontiers in microbiology    August 7, 2019   Volume 10 1821 doi: 10.3389/fmicb.2019.01821
Li Y, Zhang K, Liu Y, Li K, Hu D, Wronski T.Large and complex intestinal microbiota communities in hosts have profound effects on digestion and metabolism. To better understand the community structure of intestinal microbiota in Przewalski's horse () under different feeding regimes, we compared bacterial diversity and composition between captive and reintroduced Przewalski's horses, using high-throughput 16S-rRNA gene sequencing for identification. Reintroduced Przewalski's horses were sampled in two Chinese nature reserves, i.e., Dunhuang Xihu Nature Reserve (DXNR; = 8) in Gansu Province and Kalamaili Nature Reserve (KNR; = 12) in Xi...
Genetic analysis of Taishu horses on and off Tsushima Island: Implications for conservation.
Journal of equine science    July 3, 2019   Volume 30, Issue 2 33-40 doi: 10.1294/jes.30.33
Tezuka A, Takasu M, Tozaki T, Nagano AJ.Taishu horses are a native Japanese breed, of which only 41 individuals remained on Tsushima Island in 2018. Their genetic diversity is considered lower than that of other Japanese native horse breeds; thus, it needs to be investigated for sustainable conservation of this breed. Historical records revealed that several Taishu individuals were released areas off-Tsushima Island in mid-1980s. At present, Taishu horses living outside of Tsushima Island, hereafter referred to as Non-Tsushima Taishus (NTTs), are tagged. However, the genetic structure of the NTT individuals remains unclear, and such...
Molecular identification of late and terminal Pleistocene Equus ovodovi from northeastern China.
PloS one    May 16, 2019   Volume 14, Issue 5 e0216883 doi: 10.1371/journal.pone.0216883
Yuan JX, Hou XD, Barlow A, Preick M, Taron UH, Alberti F, Basler N, Deng T, Lai XL, Hofreiter M, Sheng GL.The extant diversity of horses (family Equidae) represents a small fraction of that occurring over their evolutionary history. One such lost lineage is the subgenus Sussemionus, which is thought to have become extinct during the Middle Pleistocene. However, recent molecular studies and morphological analysis have revealed that one of their representatives, E. ovodovi, did exist in Siberia during the Late Pleistocene. Fossil materials of E. ovodovi have thus far only been found in Russia. In this study, we extracted DNA from three equid fossil specimens excavated from northeastern China dated a...
Ancient genomes shed light on dark horses.
Nature reviews. Genetics    May 12, 2019   Volume 20, Issue 7 374-375 doi: 10.1038/s41576-019-0136-0
Wrighton KH.No abstract available
Whole genome sequencing analysis of horse populations inhabiting the Korean Peninsula and Przewalski’s horse.
Genes & genomics    April 2, 2019   Volume 41, Issue 6 621-628 doi: 10.1007/s13258-019-00795-w
Seong HS, Kim NY, Kim DC, Hwang NH, Son DH, Shin JS, Lee JH, Chung WH, Choi JW.The Jeju horse is an indigenous horse breed in Korea. However, there is a severe lack of genomic studies on Korean horse breeds. The objective of this study was to report genomic characteristics of domestic horse populations that inhabit South Korea (Jeju, Jeju crossbred, and Thoroughbred) and a wild horse breed (Przewalski's horse). Using the equine reference genome assembly (EquCab 2.0), more than ~ 6.5 billion sequence reads were successfully mapped, which generated an average of 40.87-fold coverage throughout the genome. Using these data, we detected a total of 12.88 million SNPs, of w...
First reports of nasal and traumatic myiasis infection in endangered Przewalski’s horses (Equus ferus przewalskii).
International journal for parasitology. Parasites and wildlife    March 24, 2019   Volume 9 21-24 doi: 10.1016/j.ijppaw.2019.03.018
Yan L, Zhang M, Tang L, Ente M, Ma X, Chu H, Li K, Hu D, Zhang D.Myiasis has great economic and medical importance. However, myiasis in wildlife that is caused by oestroid flies is relatively rarely recorded compared with that in humans and domestic animals. Recently, during our research on the conservation of Przewalski's horse (PH), we observed two new records of oestroid flies parasitizing wildlife in China. The first is the horse nasal bot fly, Rhinoestrus sp. (Diptera: Oestridae), found in a dead PH from Kalamaili Nature Reserve. One morphotype (R. purpureus-like) was identified. The second is the Wohlfahrt's wound myiasis fly, Wohlfahrtia magnifica (S...
Animal and environmental factors associated with gestation length in the endangered Old Kladruber horse.
Theriogenology    February 20, 2019   Volume 129 116-120 doi: 10.1016/j.theriogenology.2019.02.013
Malinska M, Havlicek Z, Koru E, Rezac P.Little is known about factors influencing gestation length in heavier types of horses. The objective was to assess the effects of the weight and age of mares, weight and sex of foals, lactation, month and year of conception, month of foaling, stallion and mare on gestation length in the endangered Old Kladruber breed that once served as a heavy coach horse for ceremonies of the Imperial Court in Vienna. The study was performed at the stud farm Slatinany, Czech Republic and reports data from foaling seasons between 2001 and 2018. A total of 649 gestations were included in the study. Gestation i...
ECHINOCOCCUS EQUINUS HYDATID CYST IN THE LIVER OF A PRZEWALSKI’S HORSE ( EQUUS PRZEWALSKII) IN A CANADIAN ZOO.
Journal of zoo and wildlife medicine : official publication of the American Association of Zoo Veterinarians    December 29, 2018   Volume 49, Issue 4 1047-1050 doi: 10.1638/2018-0072.1
Milnes E, Delnatte P, Dutton CJ, Brouwer E, Cai HY, Smith DA, Peregrine AS.A 23-yr-old captive-born Przewalski's horse mare ( Equus przewalskii) was euthanized at a Canadian zoo because of severe colic resulting from rupture of a jejunal pseudodiverticulum. An incidental finding of an encysted larval cestode within a hepatic granuloma was diagnosed on histopathology. Gel-based polymerase chain reaction (PCR) on liver tissue was positive for Echinococcus granulosus sensu lato, and deoxyribonucleic acid sequencing of the PCR product was 100% homologous with Echinococcus equinus. This appears to be the first molecular confirmation of E. equinus in North America, and the...
Genetic analyses for conservation of the traditional Tokara horse using 31 microsatellite markers.
Journal of equine science    December 18, 2018   Volume 29, Issue 4 97-104 doi: 10.1294/jes.29.97
Senokuchi A, Ishikawa S, Tozaki T, Takasu M, Kakoi H, Misumi K, Hobo S.In order to promote conservation of the traditional Tokara horse in its remaining three breeding areas in Japan (Nakanoshima, Kaimondake, and Iriki), we genotyped 123 horses using 31 microsatellite markers and determined their genetic diversity. On average, the number of alleles (N), observed heterozygosity (H), expected heterozygosity (H), and inbreeding coefficient (F) among all horses were 3.0, 0.424, 0.481, and 0.108, respectively. Compared with other endangered horse breeds, we found that, even though the size of the Tokara horse population has recently increased, the N, H, and H of Tokar...
First attempts for vitrification of immature oocytes in donkey (Equus asinus): Comparison of two vitrification methods.
Theriogenology    December 18, 2018   Volume 126 261-265 doi: 10.1016/j.theriogenology.2018.12.030
Douet C, Reigner F, Barrière P, Blard T, Deleuze S, Goudet G.Most wild donkey breeds are severely threatened by poaching for meat, habitat loss, and competition with livestock for food resources. Moreover, due to the mechanization in agriculture and in transport, most domestic donkey breeds are at risk of extinction. Considering the importance of biodiversity and preservation of genetic resources, the creation of genetic banks for endangered donkey breeds is urgently needed. Cryopreservation of immature jennies oocytes would be an efficient tool to allow storage of female genetics. The aim of the present study was to establish conditions for immature do...
Improvement in Semen Conservation of the Indigenous Czech Endangered Old Kladruber Horse: Special Focus on the Type of Extender and Packaging System.
Journal of equine veterinary science    November 3, 2018   Volume 72 101-107 doi: 10.1016/j.jevs.2018.10.026
Šichtař J, Šimoník O, Bubeníčková F, Svobodová J, Nehasilová A.The aim of our study was to investigate the effect of two freezing extenders and two packaging systems on motility, plasma membrane (PM) integrity, and the apoptotic status of frozen-thawed (F-T) spermatozoa of the endangered Old Kladruber stallions. The collected semen (n = 6 stallions, three collections each) was diluted either with Gent or Lactose-EDTA (Lact) extender. Two aliquots of semen from each collection diluted in this way were prepared and then loaded into 5-mL aluminum tubes or 0.5-mL plastic straws. After thawing and then at 15 minutes intervals within 1 hour, the samples were ...