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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
p53 protein expression in conjunctival squamous cell carcinomas of domestic animals.
Veterinary ophthalmology    June 9, 2001   Volume 2, Issue 4 227-231 doi: 10.1046/j.1463-5224.1999.00086.x
Sironi G, Riccaboni P, Mertel L, Cammarata G, Brooks DE.The expression of p53 protein was investigated in eight formalin-fixed, paraffin-embedded conjunctival squamous cell carcinomas of five horses and one cow, dog and cat each by an immunohistochemical procedure in order to evaluate protein overexpression. Anti-human p53 protein mouse monoclonal antibodies known to be cross-reactive with p53 protein of the animal species examined were used. Positive p53 nuclear immunostaining was detected in five equine, one bovine and one feline cases. Conversely, no p53 immunostaining was found in the only canine case examined. These results demonstrate a frequ...
Functional and computer modelling studies of haemoglobin from horse. The haemoglobin system of the Sardinian wild dwarf horse.
European journal of biochemistry    June 8, 2001   Volume 268, Issue 11 3313-3320 doi: 10.1046/j.1432-1327.2001.02235.x
Pellegrini M, Corda M, Manca L, Olianas A, Sanna MT, Fais A, De Rosa MC, Bertonati C, Masala B, Giardina B.A study was made of the haemoglobin (Hb) system from the Sardinian dwarf horse (Equus caballus jara), one of the last surviving wild horse species in Europe. The oxygen binding properties of the whole haemolysate and of the four different horse Hbs, separated by ion-exchange chromatography, were studied with special regard to the effect of chloride, 2,3-diphosphoglycerate and lactate. Results indicate that no significant functional differences exist between the four Hb components of horse haemolysate. Moreover, the molecular basis of the intrinsically low oxygen affinity and of the weak intera...
Characterization of expressed sequence tags generated from skin cDNA clones of Equus caballus by single pass sequencing.
Animal biotechnology    May 24, 2001   Volume 12, Issue 1 87-97 doi: 10.1081/ABIO-100102981
Lieto LD, Cothran EG.A cDNA library was built using RNA extracted from the skin tissue of an adult horse. The library was primed with oligo (dT) and sequences were directionally inserted in order to produce an expression library. The library has 5.8X 10(5) plaque forming units with 99.6% recombinant phage. The average insert size is 1.3 Kbp. Three hundred and thirteen expressed sequence tags (ESTs) were generated from sequencing of the 5 prime end of randomly selected skin cDNA clones. The ESTs were sequenced on an ABI 377 using Big-Dye chemistry. A similarity search was performed on each EST using the NCBI non-re...
Uterocalin, a lipocalin provisioning the preattachment equine conceptus: fatty acid and retinol binding properties, and structural characterization.
The Biochemical journal    May 23, 2001   Volume 356, Issue Pt 2 369-376 doi: 10.1042/0264-6021:3560369
Suire S, Stewart F, Beauchamp J, Kennedy MW.The equine conceptus is surrounded by a fibrous capsule that persists until about day 20 of pregnancy, whereupon the capsule is lost, the conceptus attaches to the endometrium and placentation proceeds. Before attachment, the endometrium secretes in abundance a protein of the lipocalin family, uterocalin. The cessation of secretion coincides with the end of the period during which the conceptus is enclosed in its capsule, suggesting that uterocalin is essential for the support of the embryo before direct contact between maternal and foetal tissues is established. Using recombinant protein and ...
Equine neuronal ceroid lipofuscinosis.
Acta neuropathologica    May 18, 2001   Volume 101, Issue 4 410-414 doi: 10.1007/s004010000298
Url A, Bauder B, Thalhammer J, Nowotny N, Kolodziejek J, Herout N, Fürst S, Weissenböck H.Neuronal ceroid lipofuscinosis (NCL) is an inherited, neurodegenerative disorder with fatal outcome in humans. It has also been described in some animal species; this is the first report of NCL in equines. Three horses showed developmental retardation, slow movements and loss of appetite at the age of six months. Neurological symptoms, as well as visual failure in one case, were noticed at the age of 1 year. Due to slowly progressing deterioration, euthanasia was indicated 1.5 years after onset of conspicuous behavior. At necropsy, slight flattening of the gyri and discoloring of the brain was...
Surface mucus in the non-glandular region of the equine stomach.
Research in veterinary science    May 18, 2001   Volume 70, Issue 2 149-155 doi: 10.1053/rvsc.2001.0455
Bullimore SR, Corfield AP, Hicks SJ, Goodall C, Carrington SD.In horses, ulceration of the non-glandular region of the stomach is common and has been attributed to the lack of a protective mucus covering. This study aimed to determine whether the non-glandular region is covered by a mucus layer. A mixture of antibodies raised against human gastric mucin (MUC 5 AC) showed a tissue distribution in the glandular region of the equine stomach similar to that seen in humans. Dot blots of mucus from the glandular and non-glandular regions showed cross-reactivity with these antibodies. Various histological fixation and processing techniques were compared for the...
The role of the horse in Europe. Proceedings of the WALTHAM Symposium.
Equine veterinary journal. Supplement    May 17, 2001   Issue 28 1-72 
No abstract available
Confocal microscopy of germinal vesicle-stage equine oocytes.
Theriogenology    May 17, 2001   Volume 55, Issue 7 1417-1430 doi: 10.1016/s0093-691x(01)00491-5
Gable TL, Woods GL.The objectives were to compare cumulus type with nucleus form in equine cumulus oocyte complexes (COCs), to define the percentage of germinal vesicle (GV)-stage oocytes within a population of mares, and to further define GV nucleus shapes of equine oocytes. Cumulus types were as follows: 1) compact (56/208, 26.9%), 2) slightly expanded (37/208, 17.8%), 3) moderately expanded (27/208, 13.0%), 4) greatly expanded (15/208, 7.2%), or 5) denuded (73/208, 35.1%). One hundred thirty of 208 COCs (62.5%) were GV-stage, 21/208 (10.1%) were condensed chromatin-stage, 8/208 (3.8%) were polar body-stage, 4...
Increasing culture time from 48 to 96 or 144 hours increases the proportions of equine cumulus oocyte complexes with negative or fragmented nucleus morphology.
Theriogenology    May 17, 2001   Volume 55, Issue 7 1549-1560 doi: 10.1016/s0093-691x(01)00501-5
Gable TL, Woods GL.The objective was to test the hypothesis that increasing equine oocyte culture time from 48 to 96 or 144 h increases nucleus maturation of equine oocytes. The hypothesis was not supported because condensed chromatin-stage oocytes decreased (P<0.01) from 33/126 (26.2%) at 48 h or 34/95 (35.8%) at 96 h to 11/117 (9.4%) at 144 h, and polar body-stage oocytes decreased (P<0.01) from 65/126 (51.6%) at 48 h to 25/95 (26.3%) at 96 h and (P<0.01) to 1/117 (0.9%) at 144 h. Negative (non-staining) oocytes increased (P<0.01) from 16/126 (12.7%) at 48 h or 15/95 (15.8%) at 96 h to 39/117 (33.3%) at 144 h....
Mutations in the agouti (ASIP), the extension (MC1R), and the brown (TYRP1) loci and their association to coat color phenotypes in horses (Equus caballus).
Mammalian genome : official journal of the International Mammalian Genome Society    May 16, 2001   Volume 12, Issue 6 450-455 doi: 10.1007/s003350020017
Rieder S, Taourit S, Mariat D, Langlois B, Guérin G.Coat color genetics, when successfully adapted and applied to different mammalian species, provides a good demonstration of the powerful concept of comparative genetics. Using cross-species techniques, we have cloned, sequenced, and characterized equine melanocortin-1-receptor (MC1R) and agouti-signaling-protein (ASIP), and completed a partial sequence of tyrosinase-related protein 1 (TYRP1). The coding sequences and parts of the flanking regions of those genes were systematically analyzed in 40 horses and mutations typed in a total of 120 horses. Our panel represented 22 different horse breed...
Organisation of uterine innervation in the mare: distribution of immunoreactivities for the general neuronal markers protein gene product 9.5 and PAN-N.
Equine veterinary journal    May 16, 2001   Volume 33, Issue 3 323-325 doi: 10.2746/042516401776249624
Bae SE, Corcoran BM, Watson ED.No abstract available
PCR detection of bovine papilloma virus DNA in superficial swabs and scrapings from equine sarcoids.
Veterinary journal (London, England : 1997)    May 16, 2001   Volume 161, Issue 3 280-286 doi: 10.1053/tvjl.2000.0524
Martens A, De Moor A, Ducatelle R.The purpose of this study was to examine if bovine papilloma virus (BPV) DNA can be detected in superficial swabs or scrapings from equine sarcoids. Samples were obtained from 92 sarcoids and 20 non-sarcoidal control lesions. The polymerase chain reaction technique was used with a first primer set to check whether DNA extraction was successful, and with a second primer set specific for BPV-DNA. DNA isolation was successful in 88% of the swabs and 93% of the scrapings. All control lesions were negative for BPV-DNA.
Phylogenetic characterisation of the G(L) sequences of equine arteritis virus isolated from semen of asymptomatic stallions and fatal cases of equine viral arteritis in Denmark.
Veterinary microbiology    May 12, 2001   Volume 80, Issue 4 339-346 doi: 10.1016/s0378-1135(01)00323-6
Larsen LE, Storgaard T, Holm E.The study describes for the first time the phylogenetic relationship between equine arteritis virus (EAV) isolated from asymptomatic virus-shedding stallions and fatal cases of equine viral arteritis (EVA) in an European country. EAV was isolated from three dead foals and an aborted foetus during three different outbreaks of EVA. From these fatalities, the complete open reading frame 5, encoding the EAV G(L) protein, was amplified by reverse transcription-polymerase chain reaction and subjected to nucleotide sequence analysis. Furthermore, DNA sequences were obtained from virus isolated from s...
Ovulation rate and distribution in the thoroughbred mare, as determined by ultrasonic scanning: the effect of age.
Animal reproduction science    May 10, 2001   Volume 66, Issue 1-2 59-70 doi: 10.1016/s0378-4320(01)00092-6
Davies Morel MC, O'Sullivan JA.Ovarian activity was monitored in 2181 oestrous cycles from 1136 thoroughbred brood mares to accurately determine overall ovulation rate, the relative distribution of ovulations between left and right ovary, whether mare age had an effect on these parameters and whether ovulation pattern in one cycle affected the pattern within the next. Ultrasonic scanning was used in preference to rectal palpation and slaughterhouse material due to its greater accuracy. Mare's ages ranged from 3 to 22 years. The results obtained indicated a similar incidence of ovulation occurring on the right (49.5% of all ...
Bovine papillomavirus DNA in neoplastic and nonneoplastic tissues obtained from horses with and without sarcoids in the western United States.
American journal of veterinary research    May 9, 2001   Volume 62, Issue 5 741-744 doi: 10.2460/ajvr.2001.62.741
Carr EA, Théon AP, Madewell BR, Griffey SM, Hitchcock ME.To determine the incidence of bovine papillomavirus (BPV) type 1 or 2 in sarcoids and other samples of cutaneous tissues collected from horses in the western United States. Methods: 55 horses with sarcoids and 12 horses without sarcoids. Methods: Tissue samples (tumor and normal skin from horses with sarcoids and normal skin, papillomas, and nonsarcoid cutaneous neoplasms from horses without sarcoids) were collected. Tissue samples were analyzed for BPV-1 or -2 DNA, using a polymerase chain reaction (PCR) and restriction fragment length polymorphism. The PCR products from 7 sarcoid-affected ho...
Detection of horses infected naturally with equine infectious anemia virus by nested polymerase chain reaction.
Journal of virological methods    May 5, 2001   Volume 94, Issue 1-2 97-109 doi: 10.1016/s0166-0934(01)00283-x
Nagarajan MM, Simard C.A nested polymerase chain reaction (PCR) amplifying a region of the gag gene of equine infectious anemia virus (EIAV) was developed for the rapid and direct detection of proviral DNA from the peripheral blood of naturally infected horses and was compared with the Coggins test. DNA prepared from white blood cells of 122 field horses from 15 stables with reported cases of EIAV and one seronegative stable were analysed. Amplifications of expected size fragments were obtained by nested PCR for 88 horses using two different sets of primers targeting the gag region. The specificity of the amplified ...
Genetic parameters of eventing horse competition in France.
Genetics, selection, evolution : GSE    May 3, 2001   Volume 33, Issue 2 175-190 doi: 10.1186/1297-9686-33-2-175
Ricard A, Chanu I.Genetic parameters of eventing horse competitions were estimated. About 13 000 horses, 30 000 annual results during 17 years and 110 000 starts in eventing competitions during 8 years were recorded. The measures of performance were logarithmic transformations of annual earnings, annual earnings per start, and annual earnings per place, and underlying variables responsible for ranks in each competition. Heritabilities were low (0.11 / 0.17 for annual results, 0.07 for ranks). Genetic correlations between criteria were high (greater than 0.90) except between ranks and earnings per place (0.58) o...
Mapping of 31 horse genes in BACs by FISH. Lear TL, Brandon R, Piumi F, Terry RR, Guérin G, Thomas S, Bailey E.No abstract available
New approaches for validation of lethal phenotypes and genetic reversion in Helicobacter pylori.
Helicobacter    May 1, 2001   Volume 6, Issue 1 15-23 doi: 10.1046/j.1523-5378.2001.00001.x
McDaniel TK, Dewalt KC, Salama NR, Falkow S.Because of limited genetic tools for use in Helicobacter pylori, tests routinely applied in other bacteria for demonstrating a gene's role in viability and other phenotypes have not been applied to this organism. In a mutational study of putative response regulator genes, we aimed to develop such tools for H. pylori. Methods: We attempted to mutate five response regulator genes by allelic exchange insertional mutagenesis. For genes that yielded no viable mutants, a second copy of the gene was inserted into the chromosome via a suicide vector, and it was seen if providing the second copy would ...
Regulation of ovarian follicular dynamics in farm animals. Implications for manipulation of reproduction.
Theriogenology    May 1, 2001   Volume 55, Issue 6 1211-1239 doi: 10.1016/s0093-691x(01)00479-4
Driancourt MA.In this review, the main features of folliculogenesis are summarized and compared among species. In the past few years, ultrasonography has clarified follicle growth patterns, and our understanding of follicle maturation has improved considerably. As the follicles develop towards the ovulatory stage, three features appear to be highly conserved across all species: 1) the sequence of events (recruitment, selection and dominance); 2) the sequential need for gonadotropins (FSH for recruitment, LH for dominance) and 3) the large variability of numerical parameters (number of waves per cycle, numbe...
SRY-negative XX sex reversal in a pony: a case report.
Theriogenology    April 27, 2001   Volume 55, Issue 5 1051-1057 doi: 10.1016/s0093-691x(01)00465-4
Vaughan L, Schofield W, Ennis S.A three year old pony with sexually ambiguous external genitalia was found to have a normal female karyotype (64, XX) and bilateral inguinal testes. The PCR analysis of blood samples revealed the absence of the Y chromosome sequences SRY, eTSPY and ZFY. No Y chromosome sequences were identified in DNA extracted from the gonads. The mechanism whereby XX sex reversal occurs in the absence of SRY is unknown.
Effects of ovarian input on GnRH and LH secretion immediately postovulation in pony mares.
Theriogenology    April 27, 2001   Volume 55, Issue 5 1095-1106 doi: 10.1016/s0093-691x(01)00469-1
Greaves HE, Kalariotes V, Cleaver BD, Porter MB, Sharp DC.The potential involvement of ovarian factors in regulating GnRH and LH postovulation was studied in ovarian intact (Group 1; n=3) and ovariectomized (OVX; Group 2; n=3) mares (OVX within 12 hr of ovulation). Blood samples were collected every 10 min for 6 hr from jugular vein (JV) and intercavernous sinus (ICS) during estrus and on Day 8 postovulation for LH and GnRH analysis. Additionally, JV samples were collected twice daily (12-hr intervals) for 30 days for LH and progesterone (P4) analysis. A significant treatment x day effect (P<0.0001) describes declining plasma LH concentrations in ...
Epidemiology of Rhodococcus equi strains on Thoroughbred horse farms.
Applied and environmental microbiology    April 25, 2001   Volume 67, Issue 5 2167-2175 doi: 10.1128/AEM.67.5.2167-2175.2001
Morton AC, Begg AP, Anderson GA, Takai S, Lämmler C, Browning GF.Pulsed-field gel electrophoresis of restriction endonuclease-digested genomic DNA from a large collection of clinical isolates of Rhodococcus equi, an important pathogen of foals, was used to compare strain distribution between farms and over time. Forty-four strains were found among 209 isolates, with 5 of these accounting for over half the isolates and the 22 strains isolated more than once accounting for 90% of the isolates. The average genotypic diversity on each farm and in each year was found to be less than the genotypic diversity of the isolates taken as a whole, with 5.2% of the total...
Estimating transmission potential in gastrointestinal nematodes (order: Strongylida).
The Journal of parasitology    April 25, 2001   Volume 87, Issue 2 442-445 doi: 10.1645/0022-3395(2001)087[0442:ETPIGN]2.0.CO;2
Medica DL, Sukhdeo MV.Microparasite virulence (the potential to cause harm in the host) is thought to be regulated by a direct trade-off with pathogen transmission potential, but it is unclear whether similar trade-offs occur in macroparasites (helminths). In this analysis, the transmission potentials of 5 nematode species (order Strongylida), known to differ in their virulence, were estimated using an index based on egg production and larval survivability. Virulence estimates were based on the minimum number of worms that cause host death. In nematode species where mature adults cause pathology (trichonematidic de...
Myofibroblasts in the mucosal layer of the uterine tube.
Italian journal of anatomy and embryology = Archivio italiano di anatomia ed embriologia    April 24, 2001   Volume 103, Issue 4 Suppl 1 259-266 
Walter I.Uterine tubes from cow, sheep, horse, pig, dog, cat, rabbit, and guinea pig were examined immunohistochemically for presence and distribution of contractile cells in the mucosal lamina propria. We tested for the presence of alpha-smooth muscle actin, tropomyosin, desmin, smooth muscle myosin (heavy chain) and cytoskeletal proteins vimentin and cytokeratin. Immunostaining for alpha-smooth muscle actin showed two distribution patterns: either positive cells were freely dispersed in the mucosal lamina propria or a distinct subepithelial layer of positive cells was seen. The first distribution pat...
Separating zebras from horses.
The Journal of the American Board of Family Practice    April 21, 2001   Volume 14, Issue 2 162 
Gordon SF.No abstract available
Investigating the origins of horse domestication.
Equine veterinary journal. Supplement    April 21, 2001   Issue 28 6-14 doi: 10.1111/j.2042-3306.1999.tb05149.x
Levine MA.Before the development of firearms, the horse was crucial to warfare and, before the invention of the steam engine, it was the fastest and most reliable form of land transport. It is crucial to the life of nomadic pastoralists on the Eurasian steppe and played a major role in the evolution of human society during the Bronze Age and Iron Age. Understanding the human past requires knowledge of the origins and development of horse husbandry. The problem of being able to identify the early stages of horse domestication is one that many researchers have grappled with for the most part unsuccessfull...
Equine infectious anemia virus genomic evolution in progressor and nonprogressor ponies.
Journal of virology    April 20, 2001   Volume 75, Issue 10 4570-4583 doi: 10.1128/JVI.75.10.4570-4583.2001
Leroux C, Craigo JK, Issel CJ, Montelaro RC.A primary mechanism of lentivirus persistence is the ability of these viruses to evolve in response to biological and immunological selective pressures with a remarkable array of genetic and antigenic variations that constitute a perpetual natural experiment in genetic engineering. A widely accepted paradigm of lentivirus evolution is that the rate of genetic variation is correlated directly with the levels of virus replication: the greater the viral replication, the more opportunities that exist for genetic modifications and selection of viral variants. To test this hypothesis directly, we ex...
Tales from the DNA of domestic horses.
Science (New York, N.Y.)    April 18, 2001   Volume 292, Issue 5515 218-219 doi: 10.1126/science.292.5515.218
Lister AM.No abstract available
Isolation, characterization and FISH assignments of horse BAC clones containing type I and II markers.
Cytogenetics and cell genetics    April 18, 2001   Volume 92, Issue 1-2 144-148 doi: 10.1159/000056886
Mariat D, Oustry-Vaiman A, Cribiu EP, Raudsepp T, Chowdhary BP, Guérin G.In order to increase the number of markers on the horse cytogenetic map and expand the integration with the linkage map, an equine BAC library was screened for genes and for microsatellites. Eighty-nine intra-exon primers were designed from consensus gene sequences in documented species. After PCR screening, 38 clones containing identified genes were isolated and FISH mapped. These data allowed us to refine the available Zoo-FISH results, to define ten new conserved cytogenetic segments and expand two others, thus leading to the identification of a total of 26 conserved segments between horse ...