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Topic:Horse Breeds

Horse breeds represent the diverse genetic and phenotypic variations found within the species Equus ferus caballus. These breeds are categorized based on characteristics such as size, conformation, coat color, and temperament, which have been selectively bred over centuries to fulfill specific roles and functions. Common classifications of horse breeds include light horses, draft horses, and ponies, each serving different purposes ranging from riding and racing to work and companionship. This page aggregates peer-reviewed research studies and scholarly articles that explore the genetics, history, and functional attributes of various horse breeds, as well as their impact on equine management and breeding practices.
Inhibition of Na+, K+ -ATPase with ouabain is detrimental to equine blastocysts.
Animal reproduction    January 22, 2020   Volume 17, Issue 1 e20190079 doi: 10.21451/1984-3143-AR2019-0079
do Nascimento AD, Marques JCC, Cezar ARR, Batista AM, Kastelic JP, Câmara DR.Although equine blastocysts ≤ 300 µm in diameter can be successfully vitrified, larger equine blastocysts are not good candidates for cryopreservation. As Na, K-ATPase is involved in maintaining blastocyst expansion, perhaps inhibition of this enzyme would be a viable method of reducing blastocyst diameter prior to cryopreservation. Objectives were to evaluate effects of ouabain-induced inhibition of Na, K-ATPase in equine blastocysts. Sixteen mares were ultrasonographically monitored, given deslorelin acetate to induce ovulation, and inseminated. Embryos (D7 and D9) were harvested and Na, ...
Mitochondrial Profiles of the East Bulgarian and the Pleven Horse Breeds.
Journal of equine veterinary science    January 22, 2020   Volume 88 102933 doi: 10.1016/j.jevs.2020.102933
Hristov P, Yordanov G, Vladov V, Neov B, Palova N, Radoslavov G.It is well known that horse breeding in Bulgaria is a cultural heritage in Bulgaria, dating from prehistoric and historic times. Until now, molecular data on Bulgarian horses from the plain regions of the country were not available. Therefore, for the first time, we have collected genetic information about some modern horse breeds from the plain regions in Bulgaria. A total of 50 horses originating from different families from two different breeds were investigated: the first one was the Pleven horse (n = 11, breeding in the Danubian Plain), and the second one was the East Bulgarian horse bre...
Identification of a novel missense variant in SLC45A2 associated with dilute snowdrop phenotype in Gypsy horses.
Animal genetics    January 21, 2020   Volume 51, Issue 2 342-343 doi: 10.1111/age.12913
Bisbee D, Carpenter ML, Hoefs-Martin K, Brooks SA, Lafayette C.No abstract available
Genomic inbreeding trends, influential sire lines and selection in the global Thoroughbred horse population.
Scientific reports    January 16, 2020   Volume 10, Issue 1 466 doi: 10.1038/s41598-019-57389-5
McGivney BA, Han H, Corduff LR, Katz LM, Tozaki T, MacHugh DE, Hill EW.The Thoroughbred horse is a highly valued domestic animal population under strong selection for athletic phenotypes. Here we present a high resolution genomics-based analysis of inbreeding in the population that may form the basis for evidence-based discussion amid concerns in the breeding industry over the increasing use of small numbers of popular sire lines, which may accelerate a loss of genetic diversity. In the most comprehensive globally representative sample of Thoroughbreds to-date (n = 10,118), including prominent stallions (n = 305) from the major bloodstock regions of the w...
Identification of Novel lncRNAs Differentially Expressed in Placentas of Chinese Ningqiang Pony and Yili Horse Breeds.
Animals : an open access journal from MDPI    January 11, 2020   Volume 10, Issue 1 119 doi: 10.3390/ani10010119
Pu Y, Zhang Y, Zhang T, Han J, Ma Y, Liu X.As a nutrient sensor, the placenta plays a key role in regulating fetus growth and development. Long non-coding RNAs (lncRNAs) have been shown to regulate growth-related traits. However, the biological function of lncRNAs in horse placentas remains unclear. To compare the expression patterns of lncRNAs in the placentas of the Chinese Ningqiang (NQ) and Yili (YL) breeds, we performed a transcriptome analysis using RNA sequencing (RNA-seq) technology. NQ is a pony breed with an average adult height at the withers of less than 106 cm, whereas that of YL is around 148 cm. Based on 813 million high...
Whole-genome sequence analysis reveals candidate genomic footprints and genes associated with reproductive traits in Thoroughbred horse.
Reproduction in domestic animals = Zuchthygiene    January 10, 2020   Volume 55, Issue 2 200-208 doi: 10.1111/rda.13608
Asadollahpour Nanaei H, Ayatollahi Mehrgardi A, Esmailizadeh A.The primary objective of most horse breeding operations was to maximize reproductive efficiency and minimize the cost of producing live foals. Here, we compared individual horses from the Thoroughbred population (n = 17), known as a horse breed with poor reproductive performance, with other six horse populations (n = 28), to detect genomic signatures of positive selection underlying of reproductive traits. A number of protein-coding genes with significant (p-value <.01) higher F values (616 genes) and a lower value for nucleotide diversity (π) (310 genes) were identified. The results of o...
Maternal Recognition of Pregnancy in the Horse: Are MicroRNAs the Secret Messengers?
International journal of molecular sciences    January 9, 2020   Volume 21, Issue 2 419 doi: 10.3390/ijms21020419
Smits K, Gansemans Y, Tilleman L, Van Nieuwerburgh F, Van De Velde M, Gerits I, Ververs C, Roels K, Govaere J, Peelman L, Deforce D, Van Soom A.The signal for maternal recognition of pregnancy (MRP) has still not been identified in the horse. High-throughput molecular biology at the embryo-maternal interface has substantially contributed to the knowledge on pathways affected during MRP, but an integrated study in which proteomics, transcriptomics and miRNA expression can be linked directly is currently lacking. The aim of this study was to provide such analysis. Endometrial biopsies, uterine fluid, embryonic tissues, and yolk sac fluid were collected 13 days after ovulation during pregnant and control cycles from the same mares. Micro...
Single-Layer Colloid Centrifugation as a Method to Process Urine-Contaminated Stallion Semen After Freezing-Thawing.
Journal of equine veterinary science    January 7, 2020   Volume 87 102910 doi: 10.1016/j.jevs.2020.102910
Podico G, Ellerbrock RE, Curcio BR, Cheong SH, Lima FS, Canisso IF.Urospermia is a major ejaculatory dysfunction affecting stallions. It has been thought that urine-contaminated semen should not be cryopreserved; however, on select cases, urine contamination of semen cannot be avoided. A recent study suggested that urospermic semen can be cryopreserved after cushion centrifugation and extension. Thus, this study aimed to assess the use of single-layer colloid centrifugation (SLC) to process frozen-thawed urine-contaminated stallion semen. Raw ejaculates (n = 55) from eight stallions were split into three groups: no urine, low (20%), or high (50%) urine conta...
A novel simple genotyping assay for detection of the ‘Gait keeper’ mutation in DMRT3 and allele frequencies in Azteca and Costa Rican Saddle Horse breeds.
Molecular and cellular probes    January 7, 2020   Volume 50 101506 doi: 10.1016/j.mcp.2019.101506
Ayala-Valdovinos MA, Galindo-García J, Sánchez-Chiprés D, Duifhuis-Rivera T, Anguiano-Estrella R.The 'Gait keeper' mutation in the DMRT3 gene alters locomotion and gait patterns in horses. This mutation (C>A) has been found in all gaited breeds of horses analyzed but is absent in most non-gaited breeds. We developed a new mutagenically separated polymerase chain reaction (MS-PCR) based method for simple detection of horse DMRT3 genotype. Our method was applied in a preliminary study to determine DMRT3 allele frequencies in 78 Azteca horses (AZ) and 53 Costa Rican Saddle Horses (CRSH). We found a wild-type C allele frequency of 100% in the AZ horses. For the CRSH, the wild-type C freque...
[Colonel Hermann Schwyter, equine surgeon, a formative personality of equine medicine].
Schweizer Archiv fur Tierheilkunde    January 4, 2020   Volume 162, Issue 1 53-60 doi: 10.17236/sat00243
Meier H.The biography of Colonel Hermann Schwyter, equine surgeon of the Swiss Army from 1928 to 1937, and the history of training of farriers in Switzerland since the 18th century are presented. Hermann Schwyters dissertation examined the changes of equine hoof confirmation as a result of standing and gait in approximately 2,000 horses and numerous anatomical specimens. He defines the foot placement, describes possible variations, their causes and effects. Significant is also his study of the compression pathology in horses and mules. His recommendations are still valid today. The present article ref...
Equine recombination map updated to EquCab3.0.
Animal genetics    December 30, 2019   Volume 51, Issue 2 341-342 doi: 10.1111/age.12898
Beeson SK, Mickelson JR, McCue ME.No abstract available
Effect of Caffeine and Pentoxifylline Added Before or After Cooling on Sperm Characteristics of Stallion Sperm.
Journal of equine veterinary science    December 26, 2019   Volume 87 102902 doi: 10.1016/j.jevs.2019.102902
Rossi M, Gonzalez-Castro R, Falomo ME.Different additives have been tested in cooled stallion sperm, in order to maintain sperm quality and to ameliorate the decrease in sperm fertility potential. In several species, caffeine and pentoxifylline promote sperm motility by increasing energy production. We evaluate the effects of caffeine and pentoxifylline when added to stallion sperm before or after cooling. Three ejaculates from five stallions each were processed and resuspended in skim milk extender. Caffeine (5 mM), pentoxifylline (3.5 mM), or both additives combined were included to sperm before or after cooling (4°C for 24 ...
Whole-Genome Signatures of Selection in Sport Horses Revealed Selection Footprints Related to Musculoskeletal System Development Processes.
Animals : an open access journal from MDPI    December 26, 2019   Volume 10, Issue 1 53 doi: 10.3390/ani10010053
Salek Ardestani S, Aminafshar M, Zandi Baghche Maryam MB, Banabazi MH, Sargolzaei M, Miar Y.Selective breeding has led to gradual changes at the genome level of horses. Deciphering selective pressure patterns is progressive to understand how breeding strategies have shaped the sport horse genome; although, little is known about the genomic regions under selective pressures in sport horse breeds. The major goal of this study was to shed light on genomic regions and biological pathways under selective pressures in sport horses. In this study, whole-genome sequences of 16 modern sport and 35 non-sport horses were used to investigate the genomic selective signals of sport performance, by...
Brazilian Sport Horse: genetic parameters for approval of Brasileiro de Hipismo stallions.
Tropical animal health and production    December 19, 2019   Volume 52, Issue 4 1669-1680 doi: 10.1007/s11250-019-02168-7
Medeiros BR, Garbade P, Seixas L, Peripolli V, McManus C.The aim of this study was to evaluate genetic parameters for subjective scores given at the Brazilian Sport Horse (BSH) Stallion Approval by estimating heritability (h) for morphological, gait, and jumping traits and genetic correlations (γ) among the functional ones and by verifying selection feasibility. The analysis included 1179 complete evaluations from 294 horses, by 4.26 ± 0.96 judges. Each trait was evaluated using mixed models in SAS® v9.2, considering the individual as a random effect. Variance components and genetic parameters were obtained by single and two-trait animal mode...
The distinct transcriptomes of fast-twitch and slow-twitch muscles in Mongolian horses.
Comparative biochemistry and physiology. Part D, Genomics & proteomics    December 11, 2019   Volume 33 100649 doi: 10.1016/j.cbd.2019.100649
Bao T, Han H, Li B, Zhao Y, Bou G, Zhang X, Du M, Zhao R, Mongke T, Laxima , Ding W, Jia Z, Dugarjaviin M, Bai D.Skeletal muscle is the largest organ system in the mammalian body and plays a key role in locomotion of horses. Fast and slow muscle fibers have different abilities and functions to adapt to exercises. To investigate the RNA and miRNA expression profiles in the muscles with different muscle fiber compositions on Mongolian horses. We examined the muscle fiber type population and produced deep RNA sequencing for different parts of skeletal muscles. And chose two of them with the highest difference in fast and slow muscle fiber population (splenius and gluteus medius) for comparing the gene expre...
Ancient Genomes Reveal Unexpected Horse Domestication and Management Dynamics.
BioEssays : news and reviews in molecular, cellular and developmental biology    December 6, 2019   Volume 42, Issue 1 e1900164 doi: 10.1002/bies.201900164
Orlando L.The horse was essential to past human societies but became a recreational animal during the twentieth century as the world became increasingly mechanized. As the author reviews here, recent studies of ancient genomes have revisited the understanding of horse domestication, from the very early stages to the most modern developments. They have uncovered several extinct lineages roaming the far ends of Eurasia some 4000 years ago. They have shown that the domestic horse has been significantly reshaped during the last millennium and experienced a sharp decline in genetic diversity within the last...
Nursing Theory Informs Dressage.
Nursing science quarterly    December 5, 2019   Volume 33, Issue 1 35-37 doi: 10.1177/0894318419881799
Clarke PN.Application of nursing theory in daily life by applying elements of Parse's paradigm allowed for a more expansive view of the dressage experience by focusing on the paradox of visible-invisible in the unique rhythmic-patterns of the horse-rider team. The study of classical nursing theory has diminished in a similar pattern as classical dressage. The importance of studying the classics in any field is emphasized along with concerns about the future of nursing and healthcare.
Needs Assessment: What Are the Barriers to Use of Equine Genetic Testing?
Journal of equine veterinary science    December 4, 2019   Volume 85 102876 doi: 10.1016/j.jevs.2019.102876
Hammons V, Brooks SA, Wickens C.Genetic testing offers precise and accurate data to horse owners concerning their horse's health and offers potential economic value increases of foal crops via genome-assisted selection. Despite availability of at least 96 commercially available markers, fewer than 20 are commonly used. This project seeks to identify the barriers to the incorporation of genomic tools in diverse equine operations. Based on studies examining public opinion of human medical testing, we expected that lack of genetic education and few industry requirements for testing may contribute to neutral or negative opinions...
Genetic investigation of equine recurrent uveitis in Appaloosa horses.
Animal genetics    December 2, 2019   Volume 51, Issue 1 111-116 doi: 10.1111/age.12883
Rockwell H, Mack M, Famula T, Sandmeyer L, Bauer B, Dwyer A, Lassaline M, Beeson S, Archer S, McCue M, Bellone RR.Equine recurrent uveitis (ERU) is characterized by intraocular inflammation that often leads to blindness in horses. Appaloosas are more likely than any other breed to develop insidious ERU, distinguished by low-grade chronic intraocular inflammation, suggesting a genetic predisposition. Appaloosas are known for their white coat spotting patterns caused by the leopard complex spotting allele (LP) and the modifier PATN1. A marker linked to LP on ECA1 and markers near MHC on ECA20 were previously associated with increased ERU risk. This study aims to further investigate these loci and identify a...
Stage-specific metabolomic changes in equine oviductal fluid: New insights into the equine fertilization environment.
Theriogenology    November 30, 2019   Volume 143 35-43 doi: 10.1016/j.theriogenology.2019.11.035
González-Fernández L, Sánchez-Calabuig MJ, Calle-Guisado V, García-Marín LJ, Bragado MJ, Fernández-Hernández P, Gutiérrez-Adán A....A repeatable protocol for equine in vitro fertilization (IVF) has remained elusive. This is likely, in part, due to suboptimal composition of capacitation or IVF media that are currently in use. Hence, we aimed to analyse the metabolome of equine oviductal fluid (OF) at the pre- (PRE) and immediate post-ovulatory (PST) stages using proton magnetic resonance spectroscopy (H NMR). Oviductal fluid from eight PRE and six PST mares were used to prepare a total of five samples per group. A total of 18 metabolites were identified. The five metabolites with the highest concentrations in the OF sample...
Genomic Divergence in Swedish Warmblood Horses Selected for Equestrian Disciplines.
Genes    November 27, 2019   Volume 10, Issue 12 doi: 10.3390/genes10120976
Ablondi M, Eriksson S, Tetu S, Sabbioni A, Viklund Å, Mikko S.The equestrian sport horse Swedish Warmblood (SWB) originates from versatile cavalry horses. Most modern SWB breeders have specialized their breeding either towards show jumping or dressage disciplines. The aim of this study was to explore the genomic structure of SWB horses to evaluate the presence of genomic subpopulations, and to search for signatures of selection in subgroups of SWB with high or low breeding values (EBVs) for show jumping. We analyzed high density genotype information from 380 SWB horses born in the period 2010-2011, and used Principal Coordinates Analysis and Discriminant...
Expression Quantitative Trait Loci in Equine Skeletal Muscle Reveals Heritable Variation in Metabolism and the Training Responsive Transcriptome.
Frontiers in genetics    November 26, 2019   Volume 10 1215 doi: 10.3389/fgene.2019.01215
Farries G, Bryan K, McGivney CL, McGettigan PA, Gough KF, Browne JA, MacHugh DE, Katz LM, Hill EW.While over ten thousand genetic loci have been associated with phenotypic traits and inherited diseases in genome-wide association studies, in most cases only a relatively small proportion of the trait heritability is explained and biological mechanisms underpinning these traits have not been clearly identified. Expression quantitative trait loci (eQTL) are subsets of genomic loci shown experimentally to influence gene expression. Since gene expression is one of the primary determinants of phenotype, the identification of eQTL may reveal biologically relevant loci and provide functional links ...
Factors Affecting the Rate and Measurement of Feed Intake for a Cereal-Based Meal in Horses.
Journal of equine veterinary science    November 22, 2019   Volume 84 102869 doi: 10.1016/j.jevs.2019.102869
Campbell TE, Doughty H, Harris PA, de Laat MA, Sillence MN.The rapid intake of high-cereal, low-roughage meals may cause gastrointestinal and behavioral disorders. We investigated some of the factors that can affect the rate of intake (ROI) in four separate studies. Study 1 investigated the effect of chaff length and addition rate on the ROI of oats. The ROI decreased as more chaff was added to the diet, attaining significance (P < .05, n = 6) at levels above 15% addition and reaching a plateau at ∼50%. This was independent of stalk length (1.4 cm vs. 4.1 cm). Study 2 showed that meal size (varying from 0.5 to 4 g/kg BW) did not affect the RO...
Changes of sires in a breeding farm enables maintenance of DNA-level genetic variation in a produced herd of Hokkaido Native Horses.
Animal science journal = Nihon chikusan Gakkaiho    November 21, 2019   Volume 91, Issue 1 e13318 doi: 10.1111/asj.13318
Amano T, Tozaki T, Takasu M, Onogi A, Yamada F, Kawai M, Ueda J.We investigated whether regular changes of the sire in a breeding farm of Hokkaido Native Horses (HKDs) enables the DNA-level genetic variation of the produced animals to be maintained. The genotypes of 31 microsatellite markers were identified and analyzed in 207 animals produced in a breeding farm in which the sire was replaced every 3 to 5 years. The mean allele number indicating the degree of genetic variation was 5.97 and was similar to those reported previously. The mean observed heterozygosity was 0.74 and was higher than the expected heterozygosity, 0.69; F was -0.07, indicating that ...
Time of first polar body extrusion affects the developmental competence of equine oocytes after intracytoplasmic sperm injection.
Reproduction, fertility, and development    November 21, 2019   Volume 31, Issue 12 1805-1811 doi: 10.1071/RD19248
Rodríguez MB, Gambini A, Clérico G, Ynsaurralde-Rivolta AE, Briski O, Largel H, Sansinena M, Salamone DF.Assisted reproduction techniques (ARTs) have become widespread in the equine breeding industry. In particular, the combination of oocyte recovery from live mares followed by IVM and intracytoplasmic sperm injection (ICSI) has increased markedly among the ARTs used with valuable or low-fertility animals. There is currently no consensus among research groups regarding the optimal oocyte maturation period to produce high-quality embryos. In this study, we report the maturation dynamics of equine oocytes at different time points, from 20 to 40h (Experiment 1). In addition, in Experiment 2, equine ...
Redox Regulation and Oxidative Stress: The Particular Case of the Stallion Spermatozoa.
Antioxidants (Basel, Switzerland)    November 19, 2019   Volume 8, Issue 11 567 doi: 10.3390/antiox8110567
Peña FJ, O'Flaherty C, Ortiz Rodríguez JM, Martín Cano FE, Gaitskell-Phillips GL, Gil MC, Ortega Ferrusola C.Redox regulation and oxidative stress have become areas of major interest in spermatology. Alteration of redox homeostasis is recognized as a significant cause of male factor infertility and is behind the damage that spermatozoa experience after freezing and thawing or conservation in a liquid state. While for a long time, oxidative stress was just considered an overproduction of reactive oxygen species, nowadays it is considered as a consequence of redox deregulation. Many essential aspects of spermatozoa functionality are redox regulated, with reversible oxidation of thiols in cysteine resid...
Clock Genes Expression in Peripheral Leukocytes and Plasma Melatonin Daily Rhythm in Horses.
Journal of equine veterinary science    November 14, 2019   Volume 84 102856 doi: 10.1016/j.jevs.2019.102856
Giannetto C, Fazio F, Alberghina D, Giudice E, Piccione G.In mammals, behavioral and physiological processes display 24-hour rhythms that are regulated by the circadian system. In the present study, we investigated clock gene expression in peripheral leukocytes in horses. For this purpose, 10 Italian Saddle gelding horses (9-11 years old; 475 ± 28 Kg) were housed in individual boxes under natural photoperiod and natural environmental temperature. Blood samples were collected at 4-hour intervals over a 48-hour period. The day before the start of sampling, left jugular furrow of each horse was cannulated for the blood sample collection performed in ...
Rare Finding of a Full Nuchal Ligament Lamellae With Attachment Points From C2-C7 in One Australian Stock Horse.
Journal of equine veterinary science    November 14, 2019   Volume 84 102847 doi: 10.1016/j.jevs.2019.102847
May-Davis S, Vermeulen Z, Hunter R, Brown W.For over 200 years, equine anatomic literature has chiefly portrayed the attachment points of the nuchal ligament lamellae (NLL) from the second to the seventh cervical vertebrae (C2-C7). However, recent studies have shown that the modern domestic horse, Equus caballus, primarily exhibits the attachments points from C2-C5. Here we present the rare finding of a complete NLL attached from C2-C7 in one Australian Stock Horse (ASH) and discuss the potential implications of these findings. Previously, this trait has only been confirmed among close descendants of Equus ferus ferus; namely the primi...
The Level of Prolactin, Serum Amyloid A, and Selected Biochemical Markers in Mares Before and After Parturition and Foal Heat.
Journal of equine veterinary science    November 14, 2019   Volume 84 102854 doi: 10.1016/j.jevs.2019.102854
Krakowski L, Brodzki P, Krakowska I, Opielak G, Marczuk J, Piech T.The aim of the study was to determine the level of prolactin (PRL), serum amyloid A (SAA), and selected biochemical markers (T-Chol, AST, TP, Mg, P, and Ca) in the blood of mares during the perinatal period. The study involved 14 mares of the Polish Coldblood Horse breed, which were in the third trimester of pregnancy. Blood was collected for testing 2 weeks before parturition and then 24 hours after delivery and in the foal heat (9 days) and 9 days after ovulation and breeding. The research revealed significant differences in the level of PRL and SAA before and after delivery. The highest...
Characterization of the placental transcriptome through mid to late gestation in the mare.
PloS one    November 14, 2019   Volume 14, Issue 11 e0224497 doi: 10.1371/journal.pone.0224497
Loux SC, Dini P, El-Sheikh Ali H, Kalbfleisch T, Ball BA.The placenta is a dynamic organ which undergoes extensive remodeling throughout pregnancy to support, protect and nourish the developing fetus. Despite the importance of the placenta, very little is known about its gene expression beyond very early pregnancy and post-partum. Therefore, we utilized RNA-sequencing to characterize the transcriptome from the fetal (chorioallantois) and maternal (endometrium) components of the placenta from mares throughout gestation (4, 6, 10, 11 m). Within the endometrium, 47% of genes changed throughout pregnancy, while in the chorioallantois, 29% of genes under...
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