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Topic:Genetics

Genetics in horses encompasses the study of hereditary traits and the genetic makeup that influences various characteristics and health conditions in equine populations. This field involves the analysis of genes and their functions, inheritance patterns, and the impact of genetic variations on traits such as coat color, performance ability, and susceptibility to diseases. Research in equine genetics employs techniques such as genome mapping, sequencing, and genetic testing to identify specific genes and mutations associated with these traits. This page gathers peer-reviewed research studies and scholarly articles that explore the genetic basis of equine traits, the methodologies used in genetic research, and the implications for breeding, health management, and conservation of horse breeds.
[The specific blocks of heterochromatin on metaphase chromosomes of horse and Prjewalski horse detected by in situ digestion with restriction endonucleases].
Tsitologiia    July 13, 2000   Volume 42, Issue 5 502-507 
Deriusheva SE, Loginova IuA, Chiriaeva OG, Iasinetskaia NI, Efimov AM.Restriction endonuclease in situ digestion of metaphase chromosomes gives an opportunity to reveal strips with different structure within GC-rich pericentric heterochromatin of the domestic horse and the wild Przewalski horse. Blocks of heterochromatin, which are insensitive to HaeIII and brightly stained with chromomycin A3 after restriction enzyme digestion, are localized on the border with euchromatin in the majority of chromosomes of Equus caballus and E. przewalskii. In contrast to chromosome 5 of E. caballus, acrocentric chromosomes of E. prezewalskii which are homologous to this chromos...
Recent developments in the epidemiology of virus diseases and BSE.
Infection    July 8, 2000   Volume 27 Suppl 2 S39-S41 doi: 10.1007/BF02561670
Kaaden OR, Truyen U.There is a continuous change in viral epidemics with respect to clinical symptoms, their duration or disappearance and the emergence of new diseases. This can be observed both in human and animal diseases. This evolution of virus diseases is mainly related to three factors: etiological agent, host and environment. As far as genetic alterations of the virus are concerned, two major mechanisms are involved: 1) mutations such as recombination and reassortment; 2) selection for resistance or susceptibility. The epidemiology of newly emerged virus diseases in man and animals, such as AIDS and hemor...
Cytochemical and electrophoretic study of the stallion epididymal glycoproteins.
Journal of submicroscopic cytology and pathology    July 6, 2000   Volume 32, Issue 1 117-130 
Retamal C, Urzúa J, Alves EW, López ML.It has been suggested that proteins produced in specific regions of the epididymis, mostly androgen dependent glycoproteins, are involved in the sperm maturation process. In the present work, the glycoconjugated distribution pattern and the electrophoretic characteristics of the stallion epididymal proteins were examined using lectin probes. The identification in the luminal fluid of some new proteins, probably synthesized and secreted by the epididymis, is an important initial step to investigate their interaction with the stallion sperm membrane. The binding of FITC-lectins (ConA, WGA, LPA, ...
Effects of different activation treatments on fertilization of horse oocytes by intracytoplasmic sperm injection.
Journal of reproduction and fertility    June 24, 2000   Volume 119, Issue 2 253-260 
Li X, Morris LH, Allen WR.The effects of four reagents on the activation and subsequent fertilization of equine oocytes, and the development of these after intracytoplasmic sperm injection, were investigated. Cumulus-oocyte complexes collected from equine ovaries obtained from an abattoir were matured in vitro for 40-44 h in TCM199 medium before being injected, when in metaphase II, with an immobilized stallion spermatozoon. The cumulus-oocyte complexes were then subjected to one of five activation treatments: (a) 10 micromol ionomycin l(-1) for 10 min; (b) 7% (v/v) ethanol for 10 min; (c) 100 micromol thimerosal l(-1)...
Glycosylation in the near-term epitheliochorial placenta of the horse, donkey and camel: a comparative study of interbreeding and non-interbreeding species.
Journal of reproduction and fertility    June 24, 2000   Volume 118, Issue 2 397-405 
Jones CJ, Wooding FB, Abd-Elnaeim MM, Leiser R, Dantzer V, Stoddart RW.Studies from this laboratory have shown great diversity in the glycosylation of tissues comprising the interhaemal barrier of species with different placental types. This diversity may be one of the factors preventing interbreeding between species. Glycan expression within the uterine epithelium and trophoblast of the interhaemal barrier was examined to test this proposition in three species with similar diffuse, microcotyledonary, epitheliochorial allantochorionic types of placenta: the horse (Equus caballus) and donkey (Equus asinus), which can interbreed with each other, and the camel (Came...
First comprehensive low-density horse linkage map based on two 3-generation, full-sibling, cross-bred horse reference families.
Genomics    June 22, 2000   Volume 66, Issue 2 123-134 doi: 10.1006/geno.2000.6207
Swinburne J, Gerstenberg C, Breen M, Aldridge V, Lockhart L, Marti E, Antczak D, Eggleston-Stott M, Bailey E, Mickelson J, Røed K, Lindgren G....Two 3-generation full-sibling reference families have been produced and form a unique resource for genetic linkage mapping studies in the horse. The F(2) generations, now comprising 61 individuals, consist of 28- to 32-day-old embryos removed nonsurgically from two pairs of identical twin mares. The same stallion sired all F(2)s such that the two full-sibling families are half-sibling with respect to each other. The families are crossbred to maximize levels of heterozygosity and include Arabian, Thoroughbred, Welsh Cob, and Icelandic Horse breeds. Milligram quantities of DNA have been isolated...
Raman optical activity characterization of native and molten globule states of equine lysozyme: comparison with hen lysozyme and bovine alpha-lactalbumin.
Biopolymers    June 22, 2000   Volume 57, Issue 4 235-248 doi: 10.1002/1097-0282(2000)57:4<235::AID-BIP5>3.0.CO;2-H
Blanch EW, Morozova-Roche LA, Hecht L, Noppe W, Barron LD.Vibrational Raman optical activity (ROA) spectra of the calcium-binding lysozyme from equine milk in native and nonnative states are measured and compared with those of the homologous proteins hen egg white lysozyme and bovine alpha-lactalbumin. The ROA spectrum of holo equine lysozyme at pH 4.6 and 22 degrees C closely resembles that of hen lysozyme in regions sensitive to backbone and side chain conformations, indicating similarity of the overall secondary and tertiary structures. However, the intensity of a strong positive ROA band at approximately 1340 cm(-1), which is assigned to a hydrat...
Comparative aspects of equine embryonic development.
Animal reproduction science    June 14, 2000   Volume 60-61 691-702 doi: 10.1016/s0378-4320(00)00075-0
Betteridge KJ.The developmental changes in the equine conceptus, its maternal environment and their interaction during the first 4 weeks following fertilization are reviewed. Attention is drawn to species-specific events to show why the horse is such a valuable model in which to study early pregnancy.
The early fetal life of the equine conceptus.
Animal reproduction science    June 14, 2000   Volume 60-61 679-689 doi: 10.1016/s0378-4320(00)00138-x
Sharp DC.This paper will discuss development of the equine conceptus, especially from the perspective of the maternal environment in which it develops and to which it has considerable influence.
Use of repetitive sequence-based polymerase chain reaction for molecular epidemiologic analysis of Streptococcus equi subspecies equi.
American journal of veterinary research    June 13, 2000   Volume 61, Issue 6 699-705 doi: 10.2460/ajvr.2000.61.699
Al-Ghamdi GM, Kapur V, Ames TR, Timoney JF, Love DN, Mellencamp MA.To determine whether repetitive sequence-based polymerase chain reaction (rep-PCR) could be used to differentiate Streptococcus equi isolates, to examine S equi isolates from throughout the world, and to determine whether a horse had > 1 subtype of S equi during an outbreak of disease. Methods: An initial group of 32 S equi isolates, 63 S equi isolates from various geographic areas, and 17 S equi isolates obtained during outbreaks of disease. Methods: An aliquot of S equi genomic DNA was amplified, using enterobacterial repetitive intergenic consensus primers. Gel electrophoresis was perfor...
Molten globule structure of equine beta-lactoglobulin probed by hydrogen exchange.
Journal of molecular biology    June 3, 2000   Volume 299, Issue 3 757-770 doi: 10.1006/jmbi.2000.3761
Kobayashi T, Ikeguchi M, Sugai S.The molten globule structure of equine beta-lactoglobulin has been inferred from the hydrogen exchange protection of the backbone amide protons. In order to make it possible to measure the hydrogen exchange kinetics of the individual backbone amide protons, the uniformly (15)N-labeled recombinant protein was expressed in Escherichia coli and the NMR peak assignment was obtained for most of the backbone protons. The chemical shift and NOE results obtained under the condition where the protein assumes the native structure are fully consistent with the known secondary structure of bovine beta-lac...
Insemination of mares with low numbers of either unsexed or sexed spermatozoa.
Theriogenology    June 1, 2000   Volume 53, Issue 6 1333-1344 doi: 10.1016/S0093-691X(00)00276-4
Buchanan BR, Seidel GE, McCue PM, Schenk JL, Herickhoff LA, Squires EL.Two experiments were conducted to determine pregnancy rates in mares inseminated 1) with 5, 25 and 500 x 10(6) progressively motile spermatozoa (pms), or 2) with 25 x 10(6) sex-sorted cells. In Experiment 1, mares were assigned to 1 of 3 treatments: Group 1 (n=20) was inseminated into the uterine body with 500 x 10(6) pms. Group 2 (n=21) and Group 3 (n=20) were inseminated into the tip of the uterine horn ipsilateral to the preovulatory follicle with 25 and 5 x 10(6) pms, respectively. Mares in all 3 groups were inseminated either 40 (n=32) or 34 h (n=29) after GnRH administration. More mares ...
Cross reactivity between human erythropoietin antibody and horse erythropoietin.
Electrophoresis    June 1, 2000   Volume 21, Issue 8 1454-1457 doi: 10.1002/(SICI)1522-2683(20000501)21:83.0.CO;2-G
Kearns CF, Lenhart JA, McKeever KH.Erythropoietin (EPO) is the primary hormone of erythropoiesis. Administration of recombinant human erythropoietin (rhuEPO) to improve racing performance in the horse represents a new form of blood doping, which has been associated with increased mortality. While immunoassay kits have become plentiful, very few commercial hormone assays are made specifically for equine research. There is a strong degree of sequence homology reported for EPO among species, which has allowed antibodies designed for human EPO research to be used to determine EPO concentration in other species. The objective of the...
Effect of PGF2alpha and 13,14-dihydro-15-keto-PGF2alpha (PGFM) on corpora luteal function in nonpregnant mares.
Theriogenology    June 1, 2000   Volume 53, Issue 6 1263-1271 doi: 10.1016/S0093-691X(00)00270-3
Vanderwall DK, Betschart RW, Squires EL.The objective of this study was to determine if the primary circulating metabolite of PGF2alpha, 13,14-dihydro-15-keto-PGF2alpha (PGFM), is biologically active and would induce luteolysis in nonpregnant mares. On Day 9 after ovulation, mares (n = 7/group) were randomly assigned to receive: 1) saline control, 2) 10 mg PGF2alpha or 3) 10 mg PGFM in 5 mL 0.9% sterile saline i.m. On Days 0 through 16, blood was collected for progesterone analysis. In addition, blood was collected immediately prior to treatment, hourly for 6 h, and then at 12 and 24 h after treatment for progesterone and PGFM analy...
Horse conceptuses secrete insulin-like growth factor-binding protein 3.
Biology of reproduction    May 20, 2000   Volume 62, Issue 6 1804-1811 doi: 10.1095/biolreprod62.6.1804
Herrler A, Pell JM, Allen WR, Beier HM, Stewart F.Insulin-like growth factor-I (IGF-I) promotes early embryonic development in several species. In the rabbit, IGF-I binds to the embryonic coats from Day 3 of development onward by a 38-kDa protein that is probably insulin-like growth factor-binding protein 3 (IGFBP3). In the present study, ligand, Western, and Northern blot analyses were used to demonstrate the presence of IGF-I-binding activity, several immunoreactive IGFBP3 proteins, and IGFBP3 mRNA in horse conceptuses with particularly large amounts of immunoreactive IGFBP3 in the conceptus capsule. In addition, immunoprecipitation of radi...
Direct MS-MS identification of isoxsuprine-glucuronide in post-administration equine urine. Bosken JM, Lehner AF, Hunsucker A, Harkins JD, Woods WE, Karpiesiuk W, Carter WG, Boyles J, Fisher M, Tobin T.Isoxsuprine is routinely recovered from enzymatically-hydrolyzed, post-administration urine samples as parent isoxsuprine in equine forensic science. However, the specific identity of the material in horse urine from which isoxsuprine is recovered has never been established, although it has long been assumed to be a glucuronide conjugate (or conjugates) of isoxsuprine. Using ESI/MS/MS positive mode as an analytical tool, urine samples collected 4-8 h after isoxsuprine administration yielded a major peak at m/z 554 that was absent from control samples and resisted fragmentation to daughter ions...
The predicted metal-binding region of the arterivirus helicase protein is involved in subgenomic mRNA synthesis, genome replication, and virion biogenesis.
Journal of virology    May 9, 2000   Volume 74, Issue 11 5213-5223 doi: 10.1128/jvi.74.11.5213-5223.2000
van Dinten LC, van Tol H, Gorbalenya AE, Snijder EJ.Equine arteritis virus (EAV), the prototype Arterivirus, is a positive-stranded RNA virus that expresses its replicase in the form of two large polyproteins of 1,727 and 3,175 amino acids. The functional replicase subunits (nonstructural proteins), which drive EAV genome replication and subgenomic mRNA transcription, are generated by extensive proteolytic processing. Subgenomic mRNA transcription involves an unusual discontinuous step and generates the mRNAs for structural protein expression. Previously, the phenotype of mutant EAV030F, which carries a single replicase point mutation (Ser-2429...
Identification and phylogenetic comparison of Salem virus, a novel paramyxovirus of horses.
Virology    May 4, 2000   Volume 270, Issue 2 417-429 doi: 10.1006/viro.2000.0305
Renshaw RW, Glaser AL, Van Campen H, Weiland F, Dubovi EJ.A virus that could not be identified as a previously known equine virus was isolated from the mononuclear cells of a horse. Electron microscopy revealed enveloped virions with nucleocapsid structures characteristic of viruses in the Paramyxoviridae family. The virus failed to hemabsorb chicken or guinea pig red blood cells and lacked neuraminidase activity. Two viral genes were isolated from a cDNA expression library. Multiple sequence alignments of one gene indicated an average identity of 45% as compared to Morbillivirus N protein sequences. A weaker relationship was found with Tupaia paramy...
Sequence analysis of trinucleotide repeat microsatellites from an enrichment library of the equine genome.
Genome    May 3, 2000   Volume 43, Issue 2 354-365 
Tozaki T, Inoue S, Mashima S, Ohta M, Miura N, Tomita M.Microsatellites are useful tools for the construction of a linkage map and parentage testing of equines, but only a limited number of equine microsatellites have been elucidated. Thus, we constructed the equine genomic library enriched for DNA fragments containing (CAG)n repeats. The enriched method includes hybridization-capture of repeat regions using biotin-conjugated oligonucleotides, nucleotide substrate-biased polymerase reaction with the oligonucleotides and subsequent PCR amplification, because these procedures are useful for the cloning of less abundant trinucleotide microsatellites. ...
Primary nucleotide structure of predominant and alternate splice forms of equine insulin-like growth factor I and their gene expression patterns in tissues.
American journal of veterinary research    May 3, 2000   Volume 60, Issue 10 1234-1241 
Nixon AJ, Brower-Toland BD, Sandell LJ.To isolate, clone, and determine primary nucleotide sequence of equine insulin-like growth factor I (IGF-I) and to examine IGF-I gene expression in tissues and cartilage from horses. Methods: Horses of various ages. Methods: Total RNA was isolated from tissues and purified. Complementary DNA (cDNA) was derived by reverse transcription and polymerase chain reaction (PCR) amplification and subcloned to plasmid vectors for sequencing and comparison with other species. Total RNA from various tissues was probed with radiolabeled cDNA or complimentary RNA constructs by use of northern blotting, tube...
Ten equine dinucleotide microsatellite repeats HTG18-19, HTG22-24, HTG26-27, HGT29-30 and HTG32.
Animal genetics    April 27, 2000   Volume 31, Issue 2 145-146 doi: 10.1046/j.1365-2052.2000.00585.x
Lindgren G.No abstract available
Twenty-one new equine dinucleotide repeat microsatellites.
Animal genetics    April 27, 2000   Volume 31, Issue 2 141 doi: 10.1046/j.1365-2052.2000.00574.x
Roberts MC, Murtaugh J, Valberg SJ, Mickelson JR, Alexander LJ.No abstract available
Two polymorphic markers for the horse SLC11A1 (NRAMP1) gene.
Animal genetics    April 27, 2000   Volume 31, Issue 2 152 doi: 10.1046/j.1365-2052.2000.00599.x
Horín P, Matiasovic J.No abstract available
Polymorphic microsatellites associated with the equine CKM and CMA1 genes.
Animal genetics    April 27, 2000   Volume 31, Issue 2 141-142 doi: 10.1046/j.1365-2052.2000.00577.x
Caetano AR, Murray JD, Bowling AT.No abstract available
The isolation and characterization of 18 equine microsatellite loci, TKY272-TKY289.
Animal genetics    April 27, 2000   Volume 31, Issue 2 149-150 doi: 10.1046/j.1365-2052.2000.00596.x
Tozaki T, Kakoi H, Mashima S, Hirota K, Hasegawa T, Ishida N, Miura N, Tomita M.No abstract available
[Health aspects and the duty of care in the rearing of young horses].
DTW. Deutsche tierarztliche Wochenschrift    April 25, 2000   Volume 107, Issue 3 104-106 
Ahlswede L.Future competition horses may suffer from health impairments due to complex or partial genetic components as well as to management faults in respects to keeping, feeding and health prophylaxis against infectious diseases. This health risks exist during the whole rearing period: from late pregnancy till far beyond weaning. Health impairments reduce trade value and practical use, and interfere with aspects of animal protection. In the field of breeding permission, first in stallions, applied research ist needed. For horse farms a praxis-oriented comprehensive advisory service should be establish...
Tissue-specific localization of cytochrome P450 aromatase in the equine embryo by in situ hybridization and immunocytochemistry.
Biology of reproduction    April 25, 2000   Volume 62, Issue 5 1141-1145 doi: 10.1095/biolreprod62.5.1141
Walters KW, Corbin CJ, Anderson GB, Roser JF, Conley AJ.Estrogen production by the preimplantation equine embryo is presumed to be important in maternal-conceptus communication in the mare. The synthesis of C(18) estrogens from C(19) androgens requires cytochrome P450 aromatase (P450(arom)) in the conceptus, but little information is available on the specific tissue location or potential developmental patterns of expression for the horse. The goal of this research was to localize P450(arom) in the equine conceptus by immunocytochemistry and in situ hybridization. Intact blastocyst-stage embryos were collected by nonsurgical flush on Days 12-15 of p...
Binding of equine infectious anemia virus rev to an exon splicing enhancer mediates alternative splicing and nuclear export of viral mRNAs.
Molecular and cellular biology    April 25, 2000   Volume 20, Issue 10 3550-3557 doi: 10.1128/MCB.20.10.3550-3557.2000
Belshan M, Park GS, Bilodeau P, Stoltzfus CM, Carpenter S.In addition to facilitating the nuclear export of incompletely spliced viral mRNAs, equine infectious anemia virus (EIAV) Rev regulates alternative splicing of the third exon of the tat/rev mRNA. In the presence of Rev, this exon of the bicistronic RNA is skipped in a fraction of the spliced mRNAs. In this report, the cis-acting requirements for exon 3 usage were correlated with sequences necessary for Rev binding and transport of incompletely spliced RNA. The presence of a purine-rich exon splicing enhancer (ESE) was required for exon 3 recognition, and the addition of Rev inhibited exon 3 sp...
Genetic manipulation of equine arteritis virus using full-length cDNA clones: separation of overlapping genes and expression of a foreign epitope.
Virology    April 25, 2000   Volume 270, Issue 1 84-97 doi: 10.1006/viro.2000.0245
de Vries AA, Glaser AL, Raamsman MJ, de Haan CA, Sarnataro S, Godeke GJ, Rottier PJ.Equine arteritis virus (EAV) is an enveloped, positive-stranded RNA virus belonging to the family Arteriviridae of the order Nidovirales. The unsegmented, infectious genome of EAV is 12,704 nt in length [exclusive of the poly(A) tail] and contains eight overlapping genes that are expressed from a 3'-coterminal nested set of seven leader-containing mRNAs. To investigate the importance of the overlapping gene arrangement in the viral life-cycle and to facilitate the genetic manipulation of the viral genome, a series of mutant full-length cDNA clones was constructed in which either EAV open readi...
Meiotic competence in horse oocytes: interactions among chromatin configuration, follicle size, cumulus morphology, and season.
Biology of reproduction    April 25, 2000   Volume 62, Issue 5 1402-1408 doi: 10.1095/biolreprod62.5.1402
Hinrichs K, Schmidt AL.Horse oocytes were collected from an abattoir over a 15-mo period. After classification of follicle size and cumulus morphology, oocytes were either fixed immediately (0 h) or matured in vitro (24 h). There was no effect of season on the number of antral follicles present on the ovaries, or on oocyte maturation rate for any class of oocyte. The proportion of oocytes having condensed chromatin at 0 h increased with increasing follicle size. The oocyte maturation rate also increased with follicle size, and for follicles </= 20-mm diameter, was higher for oocytes initially having expanded cumu...