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Topic:Biomarkers

Biomarkers in horses are measurable indicators of biological processes, states, or conditions that can be used to assess health and disease. These biomarkers can be identified in various biological samples such as blood, urine, or tissue. They provide valuable information for diagnosing diseases, monitoring health status, and evaluating treatment responses in equine medicine. Common biomarkers in horses include enzymes, hormones, and metabolites, which may change in response to physiological or pathological conditions. This page compiles peer-reviewed research studies and scholarly articles that explore the identification, quantification, and application of biomarkers in equine health and disease management.
Serum proteomic analysis in equine obstructive colic: A prospective observational study.
Veterinary journal (London, England : 1997)    November 4, 2025   Volume 314 106477 doi: 10.1016/j.tvjl.2025.106477
The aim of the study was to identify proteomic signatures from the serum of horses affected by simple obstructive intestinal colic to characterize the pathological process and to assess potential biomarkers for early diagnosis. Seven horses with obstructive colic received venous blood samples for determination of standard hematobiochemical, inflammatory, and lipid profiles at the time of initial clinical examination and after conservative therapy upon recovery. Proteomic profiling was also performed on all samples by means of a within-group analysis (sick horses at discharge vs. sick horses at...
New Model of Disuse-Induced Bone Density Loss in Horses.
Animals : an open access journal from MDPI    October 29, 2025   Volume 15, Issue 21 3137 doi: 10.3390/ani15213137
Micheau L, Audigié F, Moiroud C, Jacquet S.Disuse-induced bone loss during stall confinement and immobilization is a major concern in horses because it impairs recovery and increases susceptibility to further injury. Experimental models are needed to evaluate therapeutic options, but most available equine models rely on cast immobilization, which is technically demanding and may be associated with complications. This study aimed to assess a simpler and less restrictive model to induce a quantifiable decrease in bone density in horses. Six French Standardbred horses underwent eight weeks of stall confinement, with a wooden wedge fitted ...
Does the Relationship Between Microelements (Copper, Zinc and Selenium) and Proinflammatory Proteins (IL-6, IL-8 and Tissue Factor) Have Diagnostic Value in Equine Medicine?
International journal of molecular sciences    October 27, 2025   Volume 26, Issue 21 10429 doi: 10.3390/ijms262110429
Mojsym W, Kowalik S, Chałabis-Mazurek A, Janczarek I, Kędzierski W.Some correlations between serum Cu, Zn and Se and cytokines have been reported in humans. Especially, the Cu:Zn ratio corresponded with inflammation. To date, relationships between microelements and proinflammatory proteins are poorly understood in horses. The aim of the study was to evaluate whether Cu, Zn and Se may influence turnover of IL-6, IL-8 and tissue factor (TF) in breeding and working horses. Blood samples obtained from 66 horses were analysed. There were 37 pregnant broodmares of different breeds, 13 barren broodmares and 16 race Thoroughbred horses. Serum Cu, Zn and Se concentrat...
Serum levels of the myokines receptor activator of nuclear factor κ B ligand, matrix metalloproteinase 2, and irisin in young horses during ontogeny and in response to exercise.
American journal of veterinary research    October 24, 2025   Volume 87, Issue 2 ajvr.25.04.0112 doi: 10.2460/ajvr.25.04.0112
Hammack SM, Moshage SG, Kersh ME, McCoy AM.To quantify circulating levels of myokines with a known role in bone remodeling (receptor activator of nuclear factor κ B ligand [RANK-L], matrix metalloproteinase 2 [MMP-2], and irisin) in foals in response to exercise and over the first year of life. Unassigned: 12 foals were enrolled in the study; 6 underwent an 8-week exercise program, and 6 were nonexercised controls. Blood samples were collected between 2 and 11 months of age. Receptor activator of nuclear factor κ B ligand, MMP-2, and irisin were quantified using equine-specific ELISAs. Unassigned: RANK-L, MMP-2, and irisin did not ch...
Fetometry in Arabian horses.
Frontiers in veterinary science    October 23, 2025   Volume 12 1689769 doi: 10.3389/fvets.2025.1689769
Ali A, Derar DR, Alaeyeari AA, Alharbi YM.This study aimed to monitor intrauterine fetal growth, establish predictive equations for gestational age estimation, and determine the optimal period for fetal sexing in Arabian horses using ultrasonography. Unassigned: Seven Arabian mares were monitored from insemination to parturition using transrectal ultrasonography. The following fetal and embryonic parameters were measured: embryonic vesicle (EV), crown-rump length (CRL), biparietal diameter (BIP), stomach diameter (STD), chest depth (CHD), abdominal diameter (ABD), kidney length (KDL), eyeball diameter (EBD), and eye lens length (ELL)....
Locomotory Profile, Heart Rate Variability, and Blood Parameters Reveal Adaptive Responses in Endurance Horses Trained on Deep Sand.
Veterinary sciences    October 23, 2025   Volume 12, Issue 11 1028 doi: 10.3390/vetsci12111028
Training on deep sand is commonly employed in endurance horses, but its physiological adaptation remains poorly characterized. This study aimed to characterize locomotor adaptations during a 7 km controlled-speed canter on deep sand in eighteen endurance horses, to identify heart rate variability (HRV) components, and to investigate changes in hematological variables before and after exercise. Stride frequency (SF) and stride length (SL), HRV, and hematological profiles were recorded during exercise and recovery with a fitness tracker. Associations between maximum speed and locomotor parameter...
Bioanalytical Uncertainty Assessment of Ultra-High-Performance Liquid Chromatography-High Resolution Mass Spectrometry Method for Caffeine and Lidocaine in Equine Antidoping: A Dual Perspective on Bottom-up and Top-Down Approaches.
Journal of separation science    October 23, 2025   Volume 48, Issue 10 e70308 doi: 10.1002/jssc.70308
El-Ghaly W, El Kamli T, Zaari Lambarki L, El Hamdani M, Lahkak FE, Benmoussa A, Balouch L, Bakkali F, Saffaj T, Jhilal F.The quality of quantitative results in bioanalysis requires not only a validated analytical method but also a rigorous estimation of measurement uncertainty. This study examines the challenges associated with the implementation of two distinct approaches in equine anti-doping control for the assessment of uncertainty associated with an ultra-high-performance liquid chromatography-high resolution mass spectrometry quantitative method for caffeine and lidocaine in horse urine. The bottom-up approach, based on the ISO Guide to the Expression of Uncertainty in Measurement (ISO GUM), was compared t...
Lectin Microarray-based Glycomics and Machine Learning Identify Shared Osteoarthritis Biomarkers in Humans, Dogs, and Horses.
bioRxiv : the preprint server for biology    October 17, 2025   2025.10.16.682971 doi: 10.1101/2025.10.16.682971
Peralta AG, Raeisimakiani P, Hayashi K, Mahal LK, Reesink HL.Post-traumatic osteoarthritis (PTOA) is a common sequela to joint injury in both humans and companion animal species such as horses and dogs. Despite the increasing prevalence of osteoarthritis (OA) in humans, investigation of glycosylation changes associated with OA remains in its infancy. Recent advances, such as lectin microarray analysis, now enable detailed glycan profiling in complex biofluids such as synovial fluid. Using lectin microarray technology, this study characterized glycosylation patterns in synovial fluid samples from healthy and OA-affected joints in horses, dogs, and humans...
Expression pattern of the HIFα-family in equine chorioallantois during pregnancy and placental pathology.
Theriogenology    October 16, 2025   Volume 250 117714 doi: 10.1016/j.theriogenology.2025.117714
Boakari Y, El-Sheikh Ali H, Almeida GHDR, Scoggin KE, Fernandes CB, Marchio SP, Troedsson MHT, Carreira ACO.Equine placental dysfunction impairs fetal growth and disrupts pregnancy outcomes. Despite many advances in diagnosis, the molecular pathophysiology of equine placentitis and premature placental separation remains poorly understood. However, the hypoxia-inducible factor (HIF-α) pathway is related to placental hypoxia, and its modulation in placental diseases has been shown in other species. Therefore, we hypothesized that in conditions marked by equine placental dysfunction, oxygen deprivation in the chorioallantois membrane triggers the activation of the HIF-α pathway, which is related to m...
Endothelial glycocalyx damage is associated with small intestinal disease in horses.
American journal of veterinary research    October 14, 2025   Volume 87, Issue 1 ajvr.25.07.0251 doi: 10.2460/ajvr.25.07.0251
Hobbs KJ, Ludwig EK, Martin EM, Bayless R, Bauck AG, Freeman DE, Gonzalez LM.To determine if blood and peritoneal fluid levels of syndecan-1, heparan sulfate, and hyaluronan are elevated in horses with small intestinal disease compared to healthy counterparts. Unassigned: 61 horses were categorized into control (n = 20), inflammatory (11), and strangulating (30) groups. Paired peritoneal fluid and blood samples were obtained from each group from December 2016 through December 2024 and analyzed via equine-validated ELISAs for syndecan-1, heparan sulfate, and hyaluronan concentrations. Patient survival to discharge was recorded for all groups. Immunofluorescence staining...
The metabolomic profile of a high starch versus no starch diet in athletic horses.
Scientific reports    October 13, 2025   Volume 15, Issue 1 35576 doi: 10.1038/s41598-025-23422-z
Nilsson E, Moazzami AA, Lindberg JE, Jansson A.Feeding a high amount of starch-rich grains is common practice for performance horses even though the horse has evolved to eat a grass based, i.e. low starch diet. To our knowledge, there are no studies using metabolomics to investigate the effects of a high-starch diet in horses. In this study we investigated differences in the plasma metabolic profile of 6 Standardbred horses fed a no-starch, forage-only (F) diet or a high-starch forage-concentrate (FC) diet for 29 days, respectively in a cross-over design. Postprandial plasma samples were collected on the morning of day 25 of each dietary ...
Glycan Signatures on Neutrophils in an Equine Model for Autoimmune Uveitis.
Biomolecules    October 12, 2025   Volume 15, Issue 10 1444 doi: 10.3390/biom15101444
Sprenzel CJ, Amann B, Deeg CA, Degroote RL.Glycosylation of surface proteins is a crucial post-translational modification that reflects the activation status of neutrophils, the predominant leukocyte subset in humans and horses. Neutrophils have emerged as active contributors to diseases mediated by the adaptive immune system, such as equine recurrent uveitis (ERU), a sight-threatening disease in horses and a unique model for studying the pathogenesis of autoimmune uveitis in humans. Since changes in surface glycosylation can impact neutrophil function, we were interested in the surface glycosylation landscape on neutrophils from healt...
Methodologies to Identify Metabolic Pathway Differences Between Emaciated and Moderately Conditioned Horses: A Review of Multiple Gene Expression Techniques.
Animals : an open access journal from MDPI    October 10, 2025   Volume 15, Issue 20 2933 doi: 10.3390/ani15202933
Austin MMP, Ivey JLZ, Shepherd EA, Myer PR.Starvation in horses presents critical welfare, economic, and management challenges with underlying molecular mechanisms of metabolic modification and recovery left poorly defined. Prolonged caloric deprivation induces significant systemic shifts in carbohydrate, protein, and lipid metabolism, reflected in coordinated changes in tissue-specific gene expression. This review synthesizes current knowledge on equine metabolic responses to starvation, emphasizing pathways found through RNA sequencing (RNA-seq) and real-time quantitative polymerase chain reaction (RT-qPCR) studies. Molecular investi...
Equine Asthma Is Characterised by Severity-Dependent Correlations Between Blood Neutrophil Cholesterol Content and NET Formation.
European journal of immunology    October 7, 2025   Volume 55, Issue 10 e70072 doi: 10.1002/eji.70072
Meiseberg LK, Mergani A, Delarocque J, Imker R, Köhn D, Wanes D, Bonilla MC, Veldhuizen EJA, von Köckritz-Blickwede M, Ohnesorge B, de Buhr N.Equine asthma (EA) is the most prevalent chronic lung disease in horses. Neutrophils are the main effector cells in severe EA. Neutrophil extracellular traps (NETs) have been described as contributors to severity in human asthma and chronic obstructive pulmonary disease. Thus, we aimed to investigate if NET-related factors in equine neutrophils, blood and bronchoalveolar lavage fluid (BALF) allow us to differentiate EA severities and to identify NET-related mechanistic insights in EA. We quantified NETs and NET-related factors in the blood and BALF of eight healthy horses and 18 horses with di...
Prediction Values for the Influence of Fetal Sex on Plasma Progesterone Concentration in Crioulo Breed Mares: A Preliminary Investigation.
Reproduction in domestic animals = Zuchthygiene    October 7, 2025   Volume 60, Issue 10 e70131 doi: 10.1111/rda.70131
de Lara NSS, Weiss RR, Oba E, Kozicki LE, Souza FA, Bergstein-Galan TG, Muehlbauer E, Silvestri M, de Lima PHL, Vaz ES.In equine reproduction, determining foetal sex is of economic and strategic importance, but currently available methods are often invasive, costly, or require specialised expertise. This study aimed to assess whether plasma progesterone concentrations could serve as a predictive tool for foetal sex determination in Criollo mares between the 4th and 8th months of gestation and to determine whether these measurements could identify foetal sex. Blood samples were collected at 30-day intervals from 17 Crioula mares between 114 days and 240 days of gestation. Maternal plasma progesterone concen...
Intraday and Interday Evaluation of pH and Hydrogen Peroxide in the Exhaled Breath Condensate of Horses Using A Portable Device.
ACS omega    October 6, 2025   Volume 10, Issue 41 48412-48417 doi: 10.1021/acsomega.5c05941
Barbosa B, Santi TF, Rodak AC, Nogara MF, Leite LMB, Weber SH, Niels C, Daros RR, Michelotto PV.The analysis of equine exhaled breath condensate (EBC) lacks standardized methodology, and current collection devices are often adapted for research. This study evaluates a novel horse-specific EBC collector and assesses the variability of EBC pH and hydrogen peroxide (HO) levels, exploring potential correlations with bronchoalveolar lavage (BAL) and tracheal wash (TW) cytology. Eleven healthy mixed-breed mares from a teaching herd, with no evidence of airway abnormalities, were included in this randomized observational study. The collection efficiency of the proposed device was assessed, and ...
Selected microRNAs as biomarkers in sarcoid-affected horses under immunotherapy with a mistletoe extract. Beermann A, Hamza E, Reinhard S, Koch C, Oberhänsli T, Unger L.We investigated microRNAs (miRNAs) as potential prognostic biomarkers for equine sarcoid (ES) disease. In a breed-, age-, and sex-matched case-controlled study involving 45 ES-affected and 15 control horses, we assessed the diagnostic, prognostic, and theragnostic value of 3 miRNAs (eca-miR-127, eca-miR-379, eca-miR-432) in horses treated with European mistletoe () extract versus placebo. Whole-blood miRNA concentrations were measured using reverse-transcription quantitative real-time PCR (RT-qPCR) at 3 different times. We found that eca-miR-432 expression was lower in ES-affected (median =â...
Exploring the Abnormal Characteristics of the Ovaries During the Estrus Period of Kazakh Horses Based on Single-Cell Transcriptome Technology.
Biology    October 2, 2025   Volume 14, Issue 10 1351 doi: 10.3390/biology14101351
Ren W, Zhou J, Zhu J, Zhang J, Zhao X, Yao X.The ovary is among the earliest organs to undergo age-related degeneration, limiting the reproductive potential of elite horses and constraining the growth of the equine industry. Follicular development during estrus is a key determinant of fertility, yet the molecular mechanisms underlying its decline, particularly at the level of specific ovarian cell types, remain poorly understood in equids. Here, we constructed a single-cell transcriptomic atlas to investigate ovarian changes in Kazakh horses. Using single-cell RNA sequencing (scRNA-seq), we profiled 112,861 cells from follicle-containing...
Comparative analysis of miRNA expression in Yili horses pre- and post-5000-m race.
Frontiers in genetics    October 1, 2025   Volume 16 1676558 doi: 10.3389/fgene.2025.1676558
Ma S, Ren W, Li Z, Li L, Wang R, Su Y, Huang Q, Dehaxi S, Wang J.Equine athletic performance is modulated by both genetic and epigenetic mechanisms. As dynamic regulators of gene expression, MicroRNAs (miRNAs) play a central role in the physiological response to exercise-induced stress18. This study focused on the top three elite Yili horses from a 5000-m race, collecting peripheral blood samples pre-race (group B) and post-race (group A). A longitudinal comparative analysis integrating miRNA omics profiling and target gene functional enrichment was performed. Nineteen miRNAs exhibited significant differential expression (10 upregulated, 9 downregulated), w...
Proteoglycan 4 is expressed in equine flexor tendons and tendon sheaths, with greater synovial fluid lubricin in tendon sheaths with tendon injury.
American journal of veterinary research    October 1, 2025   Volume 86, Issue 12 ajvr.25.07.0237.xml doi: 10.2460/ajvr.25.07.0237
Woodman MJ, Thomas MA, Colville MJ, Durgam S, McDonough SP, Reesink HL.To describe proteoglycan 4 (PRG4) expression, lubricin tissue distribution, and lubricin synovial fluid concentrations in healthy and injured equine flexor tendons and tenosynovial structures. Unassigned: Synovial fluid and tissues were collected over the span of 1 year. Proteoglycan 4 expression was quantified using quantitative real-time PCR, lubricin synovial fluid concentrations were measured using ELISAs, and lubricin tissue distribution was evaluated with immunohistochemistry. Histology and quantitative real-time PCR data for healthy samples were analyzed using paired t tests, repeated-m...
Proteomic profiling of endometrial tissue and plasma from mares with endometrial fibrosis†.
Biology of reproduction    September 27, 2025   Volume 114, Issue 1 158-173 doi: 10.1093/biolre/ioaf217
Muderspach ND, Daucke R, Nielsen MW, Scoggin KE, Fedorka CE, Miller LMJ, May MG, Troedsson MHT, Ferreira-Dias G, Agerholm JS, Schoof EM....Endometrial fibrosis leads to subfertility when periglandular fibrosis impairs endometrial gland function. Identifying distinct protein expressions in mares suffering from this condition is essential for understanding the pathogenesis and developing treatments to delay fibrotic progression. To gain a better understanding of protein dynamics underlying this condition, Data-Independent Acquisition Mass Spectrometry was utilized to comprehensively characterize and compare the equine endometrial and plasma proteome from mares with different severities of endometrial fibrosis. Mares in diestrus wer...
Exploratory Metabolomic Fingerprinting of Aqueous Humor in Healthy Horses and Donkeys, and in Horses with Ocular Pathologies.
Animals : an open access journal from MDPI    September 26, 2025   Volume 15, Issue 19 2810 doi: 10.3390/ani15192810
Corradini I, Jose-Cunilleras E, Nolis P, López-Murcia MM, Mayordomo-Febrer A.This study aims to generate foundational metabolomic data of aqueous humor (AH) in healthy horses and donkeys, and to investigate potential changes or trends in the metabolomic profile associated with age, sex or ocular pathology in horses. The AH metabolomic fingerprint from 5 donkeys and 35 equine eyes (17 controls, 8 with cataracts, 6 with retinal disease and 4 with anterior chamber disease (ACD)) were analyzed using nuclear magnetic resonance (NMR) spectroscopy. A linear mixed-effects model, with individual horse as a random effect and group as a fixed effect, with multiple testing correct...
Analysis of IgG responses to Sarcocystis neurona in horses with equine protozoal myeloencephalitis (EPM) suggests a Th1-biased immune response.
Veterinary immunology and immunopathology    September 24, 2025   Volume 289 111009 doi: 10.1016/j.vetimm.2025.111009
Angwin CJ, de Assis Rocha I, Reed SM, Morrow JK, Graves A, Howe DK.Equine protozoal myeloencephalitis (EPM) caused by Sarcocystis neurona is one of the most important neurological diseases of horses in the Americas. While seroprevalence of S. neurona in horses is high, clinical manifestation of EPM occurs in less than 1 % of infected horses. Antemortem diagnosis has proven challenging as serum antibodies against S. neurona are an indicator of infection but not necessarily disease. Factors governing the occurrence of EPM are largely unknown, although horse immunity might contribute to EPM pathogenesis. Immunoglobulin G is the predominant antibody class in eq...
Identification of Candidate Biomarkers Detected in the Urine of Racehorses After Anabolic Agent Administration: Use of Orthogonal Methods for Structural Elucidation.
Drug testing and analysis    September 18, 2025   Volume 17, Issue 12 2411-2420 doi: 10.1002/dta.3951
Cloteau C, Delcourt V, Loup B, Chabot B, Pescher M, Susdorf E, Kaabia Z, Garcia P, Popot MA, Le Bizec B, Dervilly G, Bailly-Chouriberry L.Biomarker identification by mass spectrometry represents a key step in the workflow of nontargeted metabolomic studies. Given the complexity of the data, this step, which must be carried out by a trained specialist, is time-consuming, and the biomarkers discovered are not always identified. While this stage is not an obstacle to the development of new screening and classification tools, it is nonetheless crucial to a better understanding of the results obtained. For this reason, the aim of this study was to perform structural elucidation of candidate biomarkers, which had previously been displ...
Isolation and Characterization of Equine Lymph Node Endothelial Cells.
Veterinary sciences    September 18, 2025   Volume 12, Issue 9 905 doi: 10.3390/vetsci12090905
Lugo T, Myers S, Nguyen TA.In vitro models have revolutionized our understanding of biological pathways and mechanisms, offering a viable alternative to direct patient testing. However, there is a significant lack of models for different animals, particularly equine models. This study presents a novel primary cell culture extracted from a 3-year-old horse diagnosed with multisystemic eosinophilic epitheliotropic disease. Tissue samples were collected from lymph nodes at various locations. Growth curves of extracted primary cells were analyzed and the optimal conditions were assessed. Biomarkers, such as CD31, ZO-1, CD79...
Mechanisms of Variation in Abdominal Adipose Color Among Male Kazakh Horses Through Non-Coding RNA Sequencing.
Biology    September 17, 2025   Volume 14, Issue 9 1285 doi: 10.3390/biology14091285
Zhou Y, Yao X, Meng J, Wang J, Zeng Y, Li L, Ren W.The Kazakh horse is a highly valuable indigenous Chinese breed known for its use in both milk and meat production. However, the mechanisms underlying color variation in the abdominal adipose tissue of this breed remain poorly understood. In this study, the sequencing of non-coding RNAs (ncRNAs) was conducted on abdominal adipose tissue of different colors from Kazakh horses, with the aim of investigating the molecular mechanisms responsible for this variation. A total of 205 differentially expressed long non-coding RNAs (DELncRNAs) including , , and ; 52 differentially expressed microRNAs (DEm...
Preliminary insights on the daily rhythm of CRP and IL-6 in athletic horses.
Journal of equine veterinary science    September 10, 2025   Volume 154 105702 doi: 10.1016/j.jevs.2025.105702
Aragona F, Rizzo M, Arfuso F, Arrigo F, Fazio F, Giudice E, Faggio C, Piccione G, Giannetto C.Homeostasis and inflammation are two opposing physiological processes that are driven by the circadian clock. Objective: The study aim was to investigate the biological rhythm of the C-reactive protein (CRP) and Interleukin-6 (IL-6) in horses. Methods: Eight clinically healthy Italian saddle gelding horses, housed in individual boxes and subjected to a natural 12/12 L/D cycle, were enrolled. Blood samples were performed every 4 hours over a 48-hour period. Results: A positive correlation was found between CRP and IL-6 on both days of monitoring. Both parameters showed a daily rhythm; CRP acrop...
Unveiling the Xianbei cavalry: a multidisciplinary approach to restore and analyse the first horse-cavalry armour set in China.
Proceedings. Biological sciences    September 10, 2025   Volume 292, Issue 2054 20251705 doi: 10.1098/rspb.2025.1705
Yang S, Xiao J, Mu L, Li C, Dai S, Li S, Cui Y, Xu Y.Between the third and sixth centuries AD (Anno Domini), the Xianbei emerged as a dominant nomadic power in the Eastern Eurasian Steppe, distinguished by their exceptional equestrian culture and the pivotal role of cavalry in warfare. Despite their historical significance, detailed knowledge of their cavalry's weaponry and equipment-particularly armour-remains fragmentary. As a critical element of military technology, armour offers valuable insights into ancient combat strategies and cultural practices. However, research on early Chinese cavalry armour has been constrained by limited textual re...
The potential value of cytokine, cortisol and vitamin D profiles in foals from birth to weaning for respiratory disease prediction on a farm endemic for Rhodococcus equi pneumonia.
Equine veterinary journal    September 9, 2025   Volume 58, Issue 2 359-371 doi: 10.1111/evj.70093
Berghaus LJ, Venner M, Helbig H, Hildebrandt D, Hart K.Rhodococcus equi causes pneumonia in young foals, but disease susceptibility and severity vary. Cortisol and vitamin D modulate immune responses and cytokine production during bacterial infection, and altered concentrations are associated with sepsis in neonatal foals. We hypothesised an age and disease effect on circulating steroid hormone concentrations in foals, and that differences in cytokines and steroid hormone concentrations would predict disease severity in pneumonic foals. Objective: To investigate circulating concentrations of various cytokines, cortisol and vitamin D as predictors ...
Charting the equine miRNA landscape: An integrated pipeline and browser for annotating, quantifying, and visualizing expression.
PLoS genetics    September 5, 2025   Volume 21, Issue 9 e1011835 doi: 10.1371/journal.pgen.1011835
Cullen JN, Cieslak J, Petersen JL, Bellone RR, Finno CJ, Kalbfleisch TS, Calloe K, Capomaccio S, Cappelli K, Coleman SJ, Distl O, Durward-Akhurst SA....MicroRNAs (miRNAs) are essential regulators of gene expression, yet few comprehensive databases exist for miRNA expression in non-model species, limiting our ability to characterize their roles in gene regulation, development, and disease. Similarly, isomiRs - length and sequence isoforms of canonical miRNAs with potentially altered regulatory targets and functions - have received even less attention in non-model species, including the horse, leaving a critical gap in our understanding of their biological significance. To address these challenges, we developed an open-source, containerized pip...