Analyze Diet

Topic:Population Dynamics

The population dynamics of horses refers to the study of changes in horse populations over time, influenced by factors such as birth rates, death rates, immigration, and emigration. These dynamics are shaped by environmental conditions, resource availability, predation, and human intervention. Understanding population dynamics is essential for managing wild horse populations and ensuring sustainable practices in breeding and conservation efforts. This page compiles peer-reviewed research studies and scholarly articles that explore the factors affecting horse population dynamics, including genetic diversity, habitat utilization, and the impact of management strategies on population stability and growth.
Methods to estimate effective population size using pedigree data: Examples in dog, sheep, cattle and horse.
Genetics, selection, evolution : GSE    January 2, 2013   Volume 45, Issue 1 1 doi: 10.1186/1297-9686-45-1
Leroy G, Mary-Huard T, Verrier E, Danvy S, Charvolin E, Danchin-Burge C.Effective population sizes of 140 populations (including 60 dog breeds, 40 sheep breeds, 20 cattle breeds and 20 horse breeds) were computed using pedigree information and six different computation methods. Simple demographical information (number of breeding males and females), variance of progeny size, or evolution of identity by descent probabilities based on coancestry or inbreeding were used as well as identity by descent rate between two successive generations or individual identity by descent rate. Results: Depending on breed and method, effective population sizes ranged from 15 to 133 ...
Implementation of Optimum Contributions selection in endangered local breeds: the case of the Menorca Horse population.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    December 27, 2012   Volume 130, Issue 3 218-226 doi: 10.1111/jbg.12023
Solé M, Valera M, Gómez MD, Cervantes I, Fernández J.Limiting the inbreeding rate (∆F) while maximizing genetic gain for any trait of economic interest is especially important in small populations of local breeds, like the Menorca Horse. In this breed, dressage performance is important for the profitability of the breed and should be accounted in the selection criterion. The aim of this study was to assess if a breeding programme aiming at improved dressage performance is feasible in such a small breed. To perform the analysis, animals that were currently available for breeding (between 3 and 20 years) were used. Selection was based on the es...
Transmission of equine influenza virus during an outbreak is characterized by frequent mixed infections and loose transmission bottlenecks.
PLoS pathogens    December 20, 2012   Volume 8, Issue 12 e1003081 doi: 10.1371/journal.ppat.1003081
Hughes J, Allen RC, Baguelin M, Hampson K, Baillie GJ, Elton D, Newton JR, Kellam P, Wood JL, Holmes EC, Murcia PR.The ability of influenza A viruses (IAVs) to cross species barriers and evade host immunity is a major public health concern. Studies on the phylodynamics of IAVs across different scales - from the individual to the population - are essential for devising effective measures to predict, prevent or contain influenza emergence. Understanding how IAVs spread and evolve during outbreaks is critical for the management of epidemics. Reconstructing the transmission network during a single outbreak by sampling viral genetic data in time and space can generate insights about these processes. Here, we ob...
Population genetics of Parascaris equorum based on DNA fingerprinting.
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases    November 17, 2012   Volume 13 236-241 doi: 10.1016/j.meegid.2012.09.022
Tydén E, Morrison DA, Engström A, Nielsen MK, Eydal M, Höglund J.The large roundworm of horses, Parascaris equorum is considered ubiquitous in breeding operations, and is regarded as a most important helminth pathogen of foals. Over the past decade, this parasite has been reported increasingly resistant to anthelmintic drugs worldwide. This paper reports analysis of the population genetic structure of P. equorum. Adult parasites (n=194) collected from Sweden, Norway, Iceland, Germany, Brazil and the USA were investigated by amplified restriction fragment length polymorphism (AFLP) analysis. The genetic variation was low (Hj=0.12-0.4), for the global populat...
Explaining spatial heterogeneity in population dynamics and genetics from spatial variation in resources for a large herbivore.
PloS one    October 31, 2012   Volume 7, Issue 10 e47858 doi: 10.1371/journal.pone.0047858
Contasti AL, Tissier EJ, Johnstone JF, McLoughlin PD.Fine-scale spatial variation in genetic relatedness and inbreeding occur across continuous distributions of several populations of vertebrates; however, the basis of observed variation is often left untested. Here we test the hypothesis that prior observations of spatial patterns in genetics for an island population of feral horses (Sable Island, Canada) were the result of spatial variation in population dynamics, itself based in spatial heterogeneity in underlying habitat quality. In order to assess how genetic and population structuring related to habitat, we used hierarchical cluster analys...
The human and animal health impacts of introduction and spread of an exotic strain of West Nile virus in Australia.
Preventive veterinary medicine    October 23, 2012   Volume 109, Issue 3-4 186-204 doi: 10.1016/j.prevetmed.2012.09.018
Hernández-Jover M, Roche S, Ward MP.Vector-borne diseases can have substantial impacts on human and animal health, including major epidemics. West Nile virus (WNV) is of particular international importance due to its recent emergence and impact in the Western Hemisphere. Despite the presence of a sub-type of WNV (Kunjin virus, KUN) in Australia, a potential ecological niche could be occupied by an exotic strain of WNV of the North American type. This study assesses the probability an exotic strain of WNV enters Australia via an infected mosquito in an aircraft from the United States (U.S.) landing at Sydney airport, the probabil...
The association of age at first start with career length in the Australian Thoroughbred racehorse population.
Equine veterinary journal    September 26, 2012   Volume 45, Issue 4 410-413 doi: 10.1111/j.2042-3306.2012.00651.x
Velie BD, Knight PK, Thomson PC, Wade CM, Hamilton NA.Studies of Thoroughbred racing populations have provided evidence of a positive effect on racing careers for horses that commence racing as 2-year-olds. Currently, research investigating the presence of this effect in the Australian Thoroughbred racing population is limited. Objective: To investigate the association between age at first start and career length in the Australian Thoroughbred population and estimate the risk of racing retirement for horses racing in Australia based on age at first start, career earnings, number of starts as a 2-year-old and distance raced. Methods: Data were col...
The feral horse foot. Part A: observational study of the effect of environment on the morphometrics of the feet of 100 Australian feral horses.
Australian veterinary journal    September 21, 2012   Volume 91, Issue 1-2 14-22 doi: 10.1111/j.1751-0813.2012.00995.x
Hampson BA, de Laat MA, Mills PC, Pollitt CC.To better understand the morphology of, and the effect of different travel patterns and varying substrate environments on, the feral horse foot to better manage the feet of domestic horses. Methods: The left forefeet of 20 adult feral horses from each of five geographically separated populations in Australia (n = 100) were investigated. Populations were selected on the basis of substrate hardness under foot and the amount of travel typical for the population. Feet were radiographed and photographed and 40 morphometric measurements of each foot were obtained. Results: Of the 40 parameters, 37 d...
The potential of embryo transfer in a German horse-breeding programme.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    September 7, 2012   Volume 130, Issue 3 199-208 doi: 10.1111/jbg.12003
Sitzenstock F, Rathke I, Ytournel F, Simianer H.A reference horse-breeding programme with 13500 foals each year was modelled with ZPLAN+. This new software for the optimization of the structures in breeding programmes is based on ZPLAN. In two scenarios, the implementation of a rigorous selection of mares was implemented. In scenario I, the mare performance test was the point of selection, while in scenario II, further information on 20 competitions in two more years is available. These selected mares were used for embryo transfer (ET), partly in combination with multiple ovulation (MOET). The selection intensity and the number of foals out...
Genetic diversity and population structure of Chinese pony breeds using microsatellite markers.
Genetics and molecular research : GMR    August 16, 2012   Volume 11, Issue 3 2629-2640 doi: 10.4238/2012.June.25.4
Xu LX, Yang SL, Lin RY, Yang HB, Li AP, Wan QS.China is one of the principal origins of ponies in the world. We made a comprehensive analysis of genetic diversity and population structure of Chinese ponies based on 174 animals of five indigenous Chinese pony breeds from five provinces using 13 microsatellite markers. One hundred and forty-four alleles were detected; the mean number of effective alleles among the pony breeds ranged from 5.38 (Guizhou) to 6.78 (Sichuan); the expected heterozygosity ranged from 0.82 (Guizhou) to 0.85 (Debao, Sichuan). Although abundant genetic variation was found, the genetic differentiation was low between t...
Profiling the careers of Thoroughbred horses racing in Australia between 2000 and 2010.
Equine veterinary journal    August 1, 2012   Volume 45, Issue 2 182-186 doi: 10.1111/j.2042-3306.2012.00614.x
Velie BD, Wade CM, Hamilton NA.Research investigating trends in racehorse careers require a benchmark for accurate comparison. Currently little whole population data exists for horses racing in Australia. Objective: To determine the range and variation in career length and number of career starts for horses racing in Australia. To document and provide evidence regarding the current differences between the sexes for career length and careers starts. Methods: Racing data were collected for Thoroughbreds over a 10-year period. Career length, number of career starts and spells per year were evaluated. Statistical analyses were ...
Similar slow down in running speed progression in species under human pressure.
Journal of evolutionary biology    July 11, 2012   Volume 25, Issue 9 1792-1799 doi: 10.1111/j.1420-9101.2012.02563.x
Desgorces FD, Berthelot G, Charmantier A, Tafflet M, Schaal K, Jarne P, Toussaint JF.Running speed in animals depends on both genetic and environmental conditions. Maximal speeds were here analysed in horses, dogs and humans using data sets on the 10 best performers covering more than a century of races. This includes a variety of distances in humans (200-1500 m). Speed has been progressing fast in the three species, and this has been followed by a plateau. Based on a Gompertz model, the current best performances reach 97.4% of maximal velocity in greyhounds to 100.3 in humans. Further analysis based on a subset of individuals and using an 'animal model' shows that running spe...
A description of the demographic characteristics of the New Zealand non-commercial horse population with data collected using a generalised random-tessellation stratified sampling design.
Preventive veterinary medicine    July 4, 2012   Volume 107, Issue 3-4 242-252 doi: 10.1016/j.prevetmed.2012.05.016
Rosanowski SM, Cogger N, Rogers CW, Benschop J, Stevenson MA.We conducted a cross-sectional survey to determine the demographic characteristics of non-commercial horses in New Zealand. A sampling frame of properties with non-commercial horses was derived from the national farms database, AgriBase™. Horse properties were stratified by property size and a generalised random-tessellated stratified (GRTS) sampling strategy was used to select properties (n=2912) to take part in the survey. The GRTS sampling design allowed for the selection of properties that were spatially balanced relative to the distribution of horse properties throughout the country. Th...
Mitochondrial DNA D-loop sequence variation in maternal lineages of Iranian native horses.
Animal genetics    June 26, 2012   Volume 44, Issue 2 209-213 doi: 10.1111/j.1365-2052.2012.02389.x
Moridi M, Masoudi AA, Vaez Torshizi R, Hill EW.To understand the origin and genetic diversity of Iranian native horses, mitochondrial DNA (mtDNA) D-loop sequences were generated for 95 horses from five breeds sampled in eight geographical locations in Iran. Sequence analysis of a 247-bp segment revealed a total of 27 haplotypes with 38 polymorphic sites. Twelve of 19 mtDNA haplogroups were identified in the samples. The most common haplotypes were found within haplogroup X2. Within-population haplotype and nucleotide diversities of the five breeds ranged from 0.838 ± 0.056 to 0.974 ± 0.022 and 0.011 ± 0.002 to 0.021 ± 0.001 res...
Pedigrees as a source of information in mtDNA studies of dogs and horses.
Animal genetics    June 21, 2012   Volume 44, Issue 2 227-230 doi: 10.1111/j.1365-2052.2012.02388.x
Głażewska I, Prusak B, Gralak B.The goal of this study was to demonstrate the usefulness of pedigree data in studies of mitochondrial DNA diversity in dogs and horses. Pedigree information allows for precisely choosing animals with distinct haplotypes for analysis, makes it possible to find rare haplotypes present exclusively in single individuals and helps to evaluate haplotype frequencies at the present and in the past. Estimating founder contributions to gene pools enables evaluating the parts of gene pools observed with the help of mtDNA analysis. An important aspect is also the financial benefits: using pedigree data, r...
Autosomal genetic diversity in non-breed horses from eastern Eurasia provides insights into historical population movements.
Animal genetics    May 21, 2012   Volume 44, Issue 1 53-61 doi: 10.1111/j.1365-2052.2012.02371.x
Warmuth V, Manica A, Eriksson A, Barker G, Bower M.Many events in the history of eastern Eurasia, including the process of domestication itself, the initial spread of domestic horses and subsequent movements, are believed to have affected the genetic structure of domestic horse populations in this area. We investigated levels of within- and between-population genetic diversity in 'non-breed horses' (working horses sampled in remote areas) from 17 locations in Asia and parts of Eastern Europe, using 26 autosomal microsatellite loci. Non-breed horses have not been subject to the same intensity of artificial selection and closed breeding as have ...
Genome-wide association study of insect bite hypersensitivity in Dutch Shetland pony mares.
Animal genetics    May 14, 2012   Volume 44, Issue 1 44-52 doi: 10.1111/j.1365-2052.2012.02368.x
Schurink A, Ducro BJ, Bastiaansen JW, Frankena K, van Arendonk JA.Insect bite hypersensitivity (IBH) is the most common allergic disease present in horses worldwide. It has been shown that IBH is under genetic control, but the knowledge of associated genes is limited. We conducted a genome-wide association study to identify and quantify genomic regions contributing to IBH in the Dutch Shetland pony population. A total of 97 cases and 91 controls were selected and matched on withers height, coat colour and pedigree to minimise the population stratification. A blood sample was collected from participating Shetland pony mares, their IBH phenotype was scored and...
Vaccine could reduce wild horse overpopulation.
Journal of the American Veterinary Medical Association    May 12, 2012   Volume 240, Issue 8 921-922 
Cima G.No abstract available
Reconstructing the origin and spread of horse domestication in the Eurasian steppe.
Proceedings of the National Academy of Sciences of the United States of America    May 7, 2012   Volume 109, Issue 21 8202-8206 doi: 10.1073/pnas.1111122109
Warmuth V, Eriksson A, Bower MA, Barker G, Barrett E, Hanks BK, Li S, Lomitashvili D, Ochir-Goryaeva M, Sizonov GV, Soyonov V, Manica A.Despite decades of research across multiple disciplines, the early history of horse domestication remains poorly understood. On the basis of current evidence from archaeology, mitochondrial DNA, and Y-chromosomal sequencing, a number of different domestication scenarios have been proposed, ranging from the spread of domestic horses out of a restricted primary area of domestication to the domestication of numerous distinct wild horse populations. In this paper, we reconstruct both the population genetic structure of the extinct wild progenitor of domestic horses, Equus ferus, and the origin and...
Evaluation of basal plasma α-melanocyte-stimulating hormone and adrenocorticotrophic hormone concentrations for the diagnosis of pituitary pars intermedia dysfunction from a population of aged horses.
Equine veterinary journal    May 6, 2012   Volume 45, Issue 1 66-73 doi: 10.1111/j.2042-3306.2012.00575.x
Mc Gowan TW, Pinchbeck GP, Mc Gowan CM.The sensitivity and specificity of basal plasma α-melanocyte-stimulating hormone (α-MSH) and adrenocorticotrophic hormone (ACTH) for the diagnosis of pituitary pars intermedia dysfunction (PPID) has not been evaluated in a population-based study. Objective: To evaluate basal plasma α-MSH and ACTH concentrations for the diagnosis of PPID in a population of horses aged ≥ 15 years. Methods: Owner-reported data were obtained using a postal questionnaire distributed to an equestrian group. A subgroup of surveyed owners was visited and veterinary examination performed on horses aged ≥ 15 year...
Maternal lineages in native Canadian equine populations and their relationship to the Nordic and Mountain and Moorland pony breeds.
The Journal of heredity    April 13, 2012   Volume 103, Issue 3 380-390 doi: 10.1093/jhered/ess003
Prystupa JM, Hind P, Cothran EG, Plante Y.A 378-bp section of the mitochondrial displacement loop was used to estimate genetic diversity in the native Canadian equine populations. The inclusion of 10 Mountain and Moorland, 3 Nordic pony breeds, 2 feral populations, and 5 horse breeds were also investigated as they may have influenced the development (or rejuvenation) of the native Canadian populations. A total of 281 samples were sequenced, which produced 75 haplotypes derived from 54 informative sites. On further investigation, 36 of these 75 haplotypes were found to be previously unreported. Overall, total diversity was lowest in th...
Comparison of continuous infusion with intermittent bolus administration of cefotaxime on blood and cavity fluid drug concentrations in neonatal foals.
Journal of veterinary pharmacology and therapeutics    April 11, 2012   Volume 36, Issue 1 68-77 doi: 10.1111/j.1365-2885.2012.01394.x
Hewson J, Johnson R, Arroyo LG, Diaz-Mendez A, Ruiz-López JA, Gu Y, del Castillo JR.Healthy neonatal foals were treated with cefotaxime by bolus (40 mg/kg i.v. q6h for 12 doses; n=10) or by infusion (loading dose of 40 mg/kg i.v. followed by continuous infusion of a total daily dose of 160 mg/kg per 24 h for 3 days; n=5). Population pharmacokinetics was determined, and concentrations in cavity fluids were measured at steady state (72 h). Highest measured serum drug concentration in the bolus group was 88.09 μg/mL and minimum drug concentration (C(min)) was 0.78 μg/mL at 6-h postadministration (immediately before each next dose), whereas infusion resulted in a steady-state c...
Genetic variability in local Brazilian horse lines using microsatellite markers.
Genetics and molecular research : GMR    April 10, 2012   Volume 11, Issue 2 881-890 doi: 10.4238/2012.April.10.4
Silva AC, Paiva SR, Albuquerque MS, Egito AA, Santos SA, Lima FC, Castro ST, Mariante AS, Correa PS, McManus CM.Genetic variability at 11 microsatellite markers was analyzed in five naturalized/local Brazilian horse breeds or genetic groups. Blood samples were collected from 328 animals of the breeds Campeira (Santa Catarina State), Lavradeira (Roraima State), Pantaneira (Pantanal Mato-Grossense), Mangalarga Marchador (Minas Gerais State), as well as the genetic group Baixadeiro (Maranhão State), and the exotic breeds English Thoroughbred and Arab. We found significant genetic variability within evaluated microsatellite loci, with observed heterozygosis varying between 0.426 and 0.768 and polymorphism ...
Summary of current knowledge of the size and spatial distribution of the horse population within Great Britain.
BMC veterinary research    April 4, 2012   Volume 8 43 doi: 10.1186/1746-6148-8-43
Boden LA, Parkin TD, Yates J, Mellor D, Kao RR.Robust demographic information is important to understanding the risk of introduction and spread of exotic diseases as well as the development of effective disease control strategies, but is often based on datasets collected for other purposes. Thus, it is important to validate, or at least cross-reference these datasets to other sources to assess whether they are being used appropriately. The aim of this study was to use horse location data collected from different contributing industry sectors ("Stakeholder horse data") to calibrate the spatial distribution of horses as indicated by owner lo...
Founder and present maternal diversity in two endangered Spanish horse breeds assessed via pedigree and mitochondrial DNA information.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    March 28, 2012   Volume 129, Issue 4 271-279 doi: 10.1111/j.1439-0388.2012.00995.x
Álvarez I, Fernández I, Lorenzo L, Payeras L, Cuervo M, Goyache F.Pedigree information and 179 mtDNA sequences from two endangered Spanish horse breeds, the Asturcón pony (143) and the Mallorquí horse (36), were analysed to asses: (i) the pedigree and molecular maternal genetic diversity of the two breeds; (ii) the concordance between the dam lines recorded in the corresponding studbooks and the mtDNA haplotypes identified; and (iii) to assess the losses of maternal genetic variability occurred from the foundation of the studbooks to present. Up to 50 Asturcón and 18 Mallorquí founder dam lines were identified in the studbooks analysed. Up to 315 Asturc...
Number of females in cattle, sheep, pig, goat and horse breeds predicted from a single year’s registration data.
Animal : an international journal of animal bioscience    March 24, 2012   Volume 5, Issue 6 980-985 doi: 10.1017/S1751731110002752
Hall SJ.An objective and accountable method is needed for deducing the number of registered animals in a breed from registration data. By following the principle that individual breeders register sufficient young females to be certain of having enough replacements for their current breeding stock, the ratios were calculated of the number of adult females in a breed to the number of female registrations, in a given year. Number of breeds considered were 8 cattle, 16 sheep, 8 pigs, 1 goat and 2 equines, all in the United Kingdom or Ireland. This yielded multipliers (4.4 for cattle, 3.3 for sheep, 3.1 fo...
Genetic diversity and admixture among Canadian, Mountain and Moorland and Nordic pony populations.
Animal : an international journal of animal bioscience    March 23, 2012   Volume 6, Issue 1 19-30 doi: 10.1017/S1751731111001212
Prystupa JM, Juras R, Cothran EG, Buchanan FC, Plante Y.As part of the requirements of the Convention on Biological Diversity, Canada has been investigating the genetic diversity of its native equine and pony populations. Along with examining four indigenous Canadian equine populations (Canadian horse, Lac La Croix pony, Newfoundland pony and Sable Island population), another 10 Mountain and Moorland, three Nordic, four horse and two feral equine populations (thought to have influenced some pony breeds) were also investigated. In total, 821 individuals were genotyped at 38 microsatellite loci. Results of the analysis of molecular variance indicated...
Genetic mapping of recurrent exertional rhabdomyolysis in a population of North American Thoroughbreds.
Animal genetics    March 23, 2012   Volume 43, Issue 6 730-738 doi: 10.1111/j.1365-2052.2012.02351.x
Fritz KL, McCue ME, Valberg SJ, Rendahl AK, Mickelson JR.Recurrent exertional rhabdomyolysis is a heritable disorder that results in painful skeletal muscle cramping with exercise in up to 10% of all Thoroughbred racehorses. Here, we report a genome-wide association study with 48 282 SNPs analyzed among 48 case and 37 control Thoroughbreds. The most significant SNPs spanned approximately 13 Mb on ECA16, and the P-value of the most significant SNP after correcting for population structure was 8.0 × 10(-6) . This region on ECA16 was further evaluated by genotyping 247 SNPs in both the initial population and a second population of 34 case and 98 contr...
Controlling pony numbers on Dartmoor.
The Veterinary record    March 20, 2012   Volume 170, Issue 11 276 doi: 10.1136/vr.e2031
No abstract available
Microsatellite markers based genetic diversity and bottleneck studies in Zanskari pony.
Gene    March 13, 2012   Volume 499, Issue 2 357-361 doi: 10.1016/j.gene.2012.03.008
Gupta AK, Chauhan M, Bhardwaj A, Tandon SN.Genetic diversity in Zanskari pony breed was evaluated at 48 microsatellite loci using fifty adult, healthy and unrelated animals. Allele frequency data was used to detect genetic diversity and bottleneck. The estimated average number of alleles (±s.e.) was 8.5208±2.5010 with a total of 409 alleles. A high level of genetic diversity within this breed was observed in terms of number of alleles, observed heterozygosity (0.6763±0.1704), expected Leven's heterozygosity (0.7724±0.795), expected Nei's heterozygosity (0.7644±0.0787) and polymorphism information content (>0.5). In-breeding coe...
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