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Topic:Heritability

Heritability in horses refers to the proportion of observable variation in traits among individuals that can be attributed to genetic factors. It is a key concept in understanding how traits such as height, coat color, speed, and temperament are passed from one generation to the next. Heritability estimates help in predicting the potential for selective breeding and the likelihood of certain traits being expressed in offspring. These estimates are calculated using statistical methods that analyze the resemblance between relatives. This page aggregates peer-reviewed research studies and scholarly articles that explore the genetic basis of heritable traits in horses, the methodologies for estimating heritability, and the implications for equine breeding and management practices.
Nutritional Influences on Skeletal Muscle and Muscular Disease.
The Veterinary clinics of North America. Equine practice    April 7, 2021   Volume 37, Issue 1 139-175 doi: 10.1016/j.cveq.2020.12.005
Urschel KL, McKenzie EC.Skeletal muscle comprises 40% to 55% of mature body weight in horses, and its mass is determined largely by rates of muscle protein synthesis. In order to support exercise, appropriate energy sources are essential: glucose can support both anaerobic and aerobic exercise, whereas fat can only be metabolized aerobically. Following exercise, ingestion of nonfiber carbohydrates and protein can aid muscle growth and recovery. Muscle glycogen replenishment is slow in horses, regardless of dietary interventions. Several heritable muscle disorders, including type 1 and 2 polysaccharide storage myopath...
Genomics in the Horse Industry: Discovering New Questions at Every Turn.
Journal of equine veterinary science    March 26, 2021   Volume 100 103456 doi: 10.1016/j.jevs.2021.103456
Brooks SA.The sheer diversity of heritable physiological traits, and the ingenuity of genome derived research technologies, extends the study of genetics to impact diverse scientific fields. Equine science is no exception, experiencing a number of genome-enabled discoveries that spur further research in areas like nutrition, reproduction, and exercise physiology. Yet unexpected findings, especially those that over-turn commonly held beliefs in the horse industry, can create challenges in outreach, education and communication with stakeholders. For example, studies of ancient DNA revealed that the oldest...
Suitability of Pedigree Information and Genomic Methods for Analyzing Inbreeding of Polish Cold-Blooded Horses Covered by Conservation Programs.
Genes    March 17, 2021   Volume 12, Issue 3 doi: 10.3390/genes12030429
Polak G, Gurgul A, Jasielczuk I, Szmatoła T, Krupiński J, Bugno-Poniewierska M.Traditionally, pedigree-based relationship coefficients were used to manage inbreeding and control inbreeding depression that occurs within populations. The extensive incorporation of genomic data in livestock breeding creates the opportunity to develop and implement methods to manage populations at the genomic level. Consequently, the realized proportion of the genome that two individuals share can be more accurately estimated instead of using pedigree information to estimate the expected proportion of shared alleles. To make use of this improvement, in this study we evaluated the genomic inb...
Genetic Parameters of Effort and Recovery in Sport Horses Assessed with Infrared Thermography.
Animals : an open access journal from MDPI    March 16, 2021   Volume 11, Issue 3 832 doi: 10.3390/ani11030832
Bartolomé E, Perdomo-González DI, Sánchez-Guerrero MJ, Valera M.The way a horse activates (effort phase-EP) and recovers (recovery phase-RP) during a sport event can affect its sport performance. The aim of this manuscript was to test horses' adaptation to sport performance and its genetic basis, using eye temperature assessed with infrared thermography. EP and RP were measured in 495 Spanish Sport Horses, during a performance test, considering sex (2) and genetic lines (5) as fixed effects. The ranking position obtained on an official sport competition was also collected. Differences in variables due to genetic line and sex effects were found, showing tha...
Influence of coat color on genetic parameter estimates in horses.
Journal of applied genetics    February 19, 2021   Volume 62, Issue 2 297-306 doi: 10.1007/s13353-021-00616-5
Junqueira GSB, Diaz IDPS, da Cruz VAR, de Araújo Oliveira CA, de Godoi FN, de Camargo GMF, Costa RB.The aim of this study was to verify the effect of the inclusion of coat color on the genetic parameter estimation for linear measurements in Campolina horses. Two models (1 and 2) were applied. For model 1, coat color effect was not included as variable of the contemporary group formation; in model 2, it was included. Model 2 presented the best fitting with a Deviance Information Criterion (DIC) of -979,459.020 compared with -1,818,458.572 DIC from model 1. The average of heritability estimates ranged from low to high magnitude (0.15 to 0.53) for model 1 and from moderate to high magnitude for...
Genetic parameters for canalization analysis of morphological traits in the Pura Raza Español horse.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    February 1, 2021   Volume 138, Issue 4 482-490 doi: 10.1111/jbg.12537
Poyato-Bonilla J, Sánchez-Guerrero MJ, Cervantes I, Gutiérrez JP, Valera M.Measurements from 13 different morphological traits of importance in the Pura Raza Español (PRE) horse were used to estimate genetic and environmental parameters following a heteroscedastic model in which data were assigned to stallions. Data sets used ranged from 20,610 (height at withers) to 48,486 measurements (length of shoulder), and the number of animals analysed in the pedigrees varied from 17,662 (height at withers) to 23,962 (dorsal-sternal diameter). Results of heritabilities of the traits varied from 0.09 (width of chest and upper neck line) to 0.30 (muscular development). Further,...
Genomic Correlations Between the Gaits of Young Horses Measured by Accelerometry and Functional Longevity in Jumping Competition.
Frontiers in genetics    January 29, 2021   Volume 12 619947 doi: 10.3389/fgene.2021.619947
Dugué M, Dumont Saint Priest B, Crichan H, Danvy S, Ricard A.Functional longevity is essential for the well-being of horses and the satisfaction of riders. Conventional selection using longevity breeding values calculated from competition results is not efficient because it takes too long to obtain reliable information. Therefore, the objective was to identify early criteria for selection. We assessed two types of early criteria: gait traits of young horses and QTLs. Thus, our aim was to estimate the genetic correlation between gait traits and longevity and to perform a genome-wide association study (GWAS) for longevity. Measurements of gaits by acceler...
Genetic consistency between gait analysis by accelerometry and evaluation scores at breeding shows for the selection of jumping competition horses.
PloS one    December 16, 2020   Volume 15, Issue 12 e0244064 doi: 10.1371/journal.pone.0244064
Ricard A, Dumont Saint Priest B, Chassier M, Sabbagh M, Danvy S.The aim was to assess the efficiency of gaits characteristics in improving jumping performance of sport horses and confront accelerometers and judge scores for this purpose. A sample of 1,477 young jumping horses were measured using accelerometers for walk, trot, and canter. Of these, 702 were genotyped with 541,175 SNPs after quality control. Dataset of 26,914 horses scored by judges in breeding shows for gaits and dataset of 142,682 horses that performed in jumping competitions were used. Analysis of accelerometric data defined three principal components from 64% to 89% of variability explai...
The Genetic Basis of Obesity and Related Metabolic Diseases in Humans and Companion Animals.
Genes    November 20, 2020   Volume 11, Issue 11 1378 doi: 10.3390/genes11111378
Wallis N, Raffan E.Obesity is one of the most prevalent health conditions in humans and companion animals globally. It is associated with premature mortality, metabolic dysfunction, and multiple health conditions across species. Obesity is, therefore, of importance in the fields of medicine and veterinary medicine. The regulation of adiposity is a homeostatic process vulnerable to disruption by a multitude of genetic and environmental factors. It is well established that the heritability of obesity is high in humans and laboratory animals, with ample evidence that the same is true in companion animals. In this r...
Principal components for morphometric traits in Campolina horses.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    November 2, 2020   Volume 138, Issue 2 179-187 doi: 10.1111/jbg.12521
Solar Diaz IDP, Strauss Borges Junqueira G, Aparecida Rocha Cruz V, Albano Araújo de Oliveira C, Nunes de Oliveira H, Miguel Ferreira de Camargo G....Principal component analysis (PCA) was applied to evaluate the genetic variability and relationship between 15 morphometric traits in 91,483 Campolina horses, as well as to propose an index based on an aggregate genotype that promotes a particular selection objective. PCA was applied to the genetic (co)variance matrix among variables. After calculation of the principal components, the breeding values were estimated to obtain an index related to the component that explained most of the variation. The first principal component (PC1) accounted for 97.8% of the total additive genetic variance of t...
De novo mutation of KIT causes extensive coat white patterning in a family of Berber horses.
Animal genetics    October 28, 2020   Volume 52, Issue 1 135-137 doi: 10.1111/age.13017
Martin K, Patterson Rosa L, Vierra M, Foster G, Brooks SA, Lafayette C.No abstract available
Genetic inbreeding depression load for morphological traits and defects in the Pura Raza Española horse.
Genetics, selection, evolution : GSE    October 20, 2020   Volume 52, Issue 1 62 doi: 10.1186/s12711-020-00582-2
Poyato-Bonilla J, Perdomo-González DI, Sánchez-Guerrero MJ, Varona L, Molina A, Casellas J, Valera M.Inbreeding is caused by mating between related individuals and is associated with reduced fitness and performance (inbreeding depression). Several studies have detected heterogeneity in inbreeding depression among founder individuals. Recently, a procedure was developed to predict hidden inbreeding depression load that is associated with founders using the Mendelian sampling of non-founders. The objectives of this study were to: (1) analyse the population structure and general inbreeding, and (2) test this recent approach for predicting hidden inbreeding depression load for four morphological ...
Genetic parameters of morphometric measurements in Criollo horses.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    October 3, 2020   Volume 138, Issue 2 174-178 doi: 10.1111/jbg.12503
Müller V, Moraes BDSS, Carvalho IR, Wendt CG, Patten RD, Nogueira CEW.The aim of this study was to estimate the genetic parameters for the morphometric measurements of withers height (WH), thoracic circumference (TC) and cannon bone circumference (CBC) of Criollo horses, stratified for maternal and paternal effects. Statistical genetic design of factor crossings was used to evaluate the offspring of full siblings and half-siblings. Fifty stallions were selected (n = 50) who had been crossed with six mares each (n = 6), to provide 300 parental pairings in which two offspring were born per mare (n = 600). WH in females and TC in males were highly influenced ...
Survey of Risk Factors and Genetic Characterization of Ewe Neck in a World Population of Pura Raza Español Horses.
Animals : an open access journal from MDPI    October 1, 2020   Volume 10, Issue 10 1789 doi: 10.3390/ani10101789
Ripolles M, Sánchez-Guerrero MJ, Perdomo-González DI, Azor P, Valera M.Ewe Neck is a relatively common morphological defect in Pura Raza Español (PRE) horses and other Baroque type horse breeds, which adversely affects the breeding industry; (1) objectives: to establish the within-breed prevalence, possible associated factors, and heritability of Ewe Neck in PRE horses; (2) methods: the database included evaluations of 35,267 PRE horses. The Ewe Neck defect, 16 morphological traits, and 4 body indices were recorded. A Bayesian genetic animal model included the following systematic effects: sex, age, coat color, geographical area of the stud, and birth stud size ...
Family aggregation analysis shows a possible heritable background of equine grass sickness (dysautonomia) in a Hungarian stud population.
Acta veterinaria Hungarica    September 30, 2020   Volume 68, Issue 3 263-268 doi: 10.1556/004.2020.00038
Vincze B, Varga M, Kutasi O, Zenke P, Szenci O, Baska F, Bartels A, Spisák S, Cseh S, Solymosi N.Equine grass sickness (also known as dysautonomia) is a life-threatening polyneuropathic disease affecting horses with approx. 80% mortality. Since its first description over a century ago, several factors, such as the phenotype, intestinal microbiome, environment, management and climate, have been supposed to be associated with the increased risk of dysautonomia. In this retrospective study, we examined the possible involvement of genetic factors. Medical and pedigree datasets regarding 1,233 horses with 49 affected animals born during a 23-year period were used in the analysis. Among the des...
Historical Changes and Description of the Current Hungarian Hucul Horse Population.
Animals : an open access journal from MDPI    July 21, 2020   Volume 10, Issue 7 1242 doi: 10.3390/ani10071242
Posta J, Somogyvári E, Mihók S.Gene conservation and management of small populations requires proper knowledge of the background and history of the breed. The aim of the study was the evaluation of population structure and changes of the Hungarian Hucul horse population. Population changes were described for the actual breeding stock as well as for groups of 10-year epochs reflecting major periods of change in the breed. Pedigree data of the registered population were analyzed using Endog and GRain software. The average value of equivalent complete generations was above nine for the actual breeding population. The longest g...
Elo Method and Race Traits: A New Integrated System for Sport Horse Genetic Evaluation.
Animals : an open access journal from MDPI    July 6, 2020   Volume 10, Issue 7 1145 doi: 10.3390/ani10071145
Giontella A, Sarti FM, Biggio GP, Giovannini S, Cherchi R, Silvestrelli M, Pieramati C.This first survey on Sardinian Anglo-Arab horse (SAA) race traits highlights important aspects for the breeding purpose of this population. The heritability of the race traits were estimated through a trivariate model; the estimates were 0.39, 0.33, and 0.30 for the number of placings, total earnings and Elo rating, respectively. The genetic progress could be improved by using an MT genetic evaluation of stallions and mares, combining information from competition traits.
Genetics of equine bleeding disorders.
Equine veterinary journal    June 23, 2020   Volume 53, Issue 1 30-37 doi: 10.1111/evj.13290
Dahlgren AR, Tablin F, Finno CJ.Genetic bleeding disorders can have a profound impact on a horse's health and athletic career. As such, it is important to understand the mechanisms of these diseases and how they are diagnosed. These diseases include haemophilia A, von Willebrand disease, prekallikrein deficiency, Glanzmann's Thrombasthenia and Atypical Equine Thrombasthenia. Exercise-induced pulmonary haemorrhage also has a proposed genetic component. Genetic mutations have been identified for haemophilia A and Glanzmann's Thrombasthenia in the horse. Mutations are known for von Willebrand disease and prekallikrein deficienc...
Combining Threshold, Thurstonian and Classical Linear Models in Horse Genetic Evaluations for Endurance Competitions.
Animals : an open access journal from MDPI    June 22, 2020   Volume 10, Issue 6 1075 doi: 10.3390/ani10061075
Cervantes I, Gutiérrez JP, García-Ballesteros S, Varona L.The racing time and rank at finish traits are commonly used for endurance horse breeding programs as a measure of their performance. Even so, given the nature of endurance competitions, many horses do not finish the race. However, the exclusion of non placed horses from the dataset could have an influence on the prediction of individual breeding values. The objective of the present paper was to develop a multitrait model including race time (T), rank (R) and placing (P), with different methodologies, to improve the genetic evaluation in endurance competitions in Spain. The database contained 6...
Genetics of Equine Endocrine and Metabolic Disease.
The Veterinary clinics of North America. Equine practice    June 11, 2020   Volume 36, Issue 2 341-352 doi: 10.1016/j.cveq.2020.03.011
Norton E, McCue ME.A role for a genetic contribution to equine metabolic syndrome (EMS) and pars pituitary intermedia dysfunction (PPID) has been hypothesized. Heritability estimates of EMS biochemical measurements were consistent with moderately to highly heritable traits. Further, genome-wide association analyses have identified hundreds of regions of the genome contributing to EMS and candidate variants have been identified. The genetics of PPID has not yet been proven. Continued research for the specific genetic risk factors for both EMS and PPID is crucial for gaining a better understanding of the pathophys...
Unraveling the Genetics Behind Equid Cardiac Disease.
The Veterinary clinics of North America. Equine practice    June 10, 2020   Volume 36, Issue 2 235-241 doi: 10.1016/j.cveq.2020.03.004
Fousse SL, Stern JA.There have been some advances in understanding the genetic contribution to ventricular septal defects in Arabians, sudden death in racehorses, and atrial fibrillation in racehorses. No genetic analyses have been published for aortic rupture in Friesians or atrioventricular block in donkeys despite strong evidence for a genetic cause. To date, no genetic mutation has been identified for any equid cardiac disease. With the advancement of genetic tools and resources, we are moving closer to discoveries that may explain the heritable basis of inherited equid cardiac disease.
Assessing the Influence of Buried Archaeology on Equine Locomotion Comparison with Ground Penetrating Radar Results.
Sensors (Basel, Switzerland)    May 22, 2020   Volume 20, Issue 10 doi: 10.3390/s20102938
Linford N, MacKechnie-Guire R, Cassar M.The aim of this trial project was to identify whether buried archaeological remains may have an influence on equine locomotion, through comparison with a non-invasive Ground Penetrating Radar (GPR) survey. This study was conducted at the world-renowned Burghley Horse Trials site, near Stamford, City of Peterborough, U.K. that has a diverse range of heritage assets throughout the wider park land centred on the Grade 1 listed Elizabethan Burghley House. The initial aim of the research was to first use geophysical survey to identify and characterise archaeological remains, and then to determine a...
Accelerometers Provide Early Genetic Selection Criteria for Jumping Horses.
Frontiers in genetics    May 19, 2020   Volume 11 448 doi: 10.3389/fgene.2020.00448
Ricard A, Dumont Saint Priest B, Danvy S, Barrey E.The aim of this study was to evaluate the genetic component of the locomotor jumping ability, via a wearable accelerometer sensor, and to estimate the genetic correlation with performance in competition, to introduce such criteria in selection schema. A sample of 1,056 young 3-year-old horses were equipped with a 3-dimensional accelerometer during a free jumping test, in regular breeding shows from 2015 to 2017. Seven variables were extracted from the dorso-ventral acceleration curve for the last three jumps over a double bar obstacle of 1.15 m for the front pole and 1.20 m for the back pole w...
Genetic Parameters and Inbreeding Effect of Morphological Traits in Sardinian Anglo Arab Horse.
Animals : an open access journal from MDPI    May 2, 2020   Volume 10, Issue 5 791 doi: 10.3390/ani10050791
Giontella A, Sarti FM, Biggio GP, Giovannini S, Cherchi R, Pieramati C, Silvestrelli M.The purpose of this study was to estimate the heritability and genetic correlations of four biometric measurements and an overall score (OS) in the Sardinian Anglo-Arab horse (SAA); moreover, the effect of inbreeding on these traits was investigated. A dataset with 43,624 horses (27,052 females and 16,572 males) was provided by the Agricultural Research Agency of Sardinia (AGRIS). Cannon bone circumference (BC), chest girth (CG), shoulder length (SL), and withers height (WH) were measured on 6033 SAA horses born in Sardinia between 1967 and 2005; beside the measurements, an overall score (OS) ...
Challenging the selection for consistency in the rank of endurance competitions.
Genetics, selection, evolution : GSE    April 10, 2020   Volume 52, Issue 1 20 doi: 10.1186/s12711-020-00539-5
Cervantes I, Bodin L, Valera M, Molina A, Gutiérrez JP.Control of the environmental variability by genetic selection offers possibilities for new selection objectives for productive traits. This methodology aims at reducing heterogeneity in productive traits and has been applied to several traits and species for which animal homogeneity is profitable. In horse breeding programmes, rank in competitions is a common selection objective but has been challenging to model. In this study, the parameters of environmental variability for the rank of a horse were computed to analyse the capability of a horse to maintain the best ranking across competitions ...
The effects of inbreeding on covering success, gestation length and foal sex ratio in Australian thoroughbred horses.
BMC genetics    April 8, 2020   Volume 21, Issue 1 41 doi: 10.1186/s12863-020-00847-1
Todd ET, Hamilton NA, Velie BD, Thomson PC.Horses produce only one foal from an eleven-month gestation period, making the maintenance of high reproductive rates essential. Genetic bottlenecks and inbreeding can increase the frequency of deleterious variants, resulting in reduced reproductive levels in a population. In this study we examined the influence of inbreeding levels on foaling rate, gestation length and secondary sex ratio in Australian Thoroughbred mares. We also investigated the genetic change in these traits throughout the history of the breed. Phenotypic data were obtained from 27,262 breeding records of Thoroughbred mares...
Heterozygotes for ACAN dwarfism alleles in horses have reduced stature.
Animal genetics    February 17, 2020   Volume 51, Issue 3 420-422 doi: 10.1111/age.12921
Graves KT, Eberth JE, Bailey E.Homozygous and compound heterozygous Miniature horses for ACAN alleles D1, D2, D3* and D4 exhibit chondrodysplastic dwarfism (OMIA 001271-9796). In a previous study, the carrier rate for these four alleles, combined, was 26.2%. The purpose of this study was to investigate whether carriers of these dwarfism-causing alleles had a shorter withers height than non-carriers. A total of 245 Miniature horses were tested for these four ACAN alleles and also were measured for withers height. Of these horses, 98 were carriers and 147 were non-carriers. A statistically significant difference of 1.43 inche...
Phenotypic and genetic analysis of reproductive traits in horse populations with different breeding purposes.
Animal : an international journal of animal bioscience    February 6, 2020   Volume 14, Issue 7 1351-1361 doi: 10.1017/S1751731120000087
Reproductive traits have a major influence on the economic effectiveness of horse breeding. However, there is little information available. We evaluated the use of reproductive traits as selection criteria in official breeding programs to increase the reproductive efficiency of breeding studs, analysing 696 690 records from the pedigree data of eight Spanish horse populations, with different breeding purposes. The reproductive parameters studied in both sexes were age at first foaling (AFF), age at last foaling, average reproductive life and generational interval. In the females, the average ...
Industry Perceptions of HERDA in Performance Horses.
Journal of equine veterinary science    January 29, 2020   Volume 88 102939 doi: 10.1016/j.jevs.2020.102939
Walker NL, Patout AR, Cater M.Hereditary equine regional derma asthenia (HERDA), an autosomal-recessive trait, found in Quarter Horses, causes abnormal collagen structure. Owing to current breeding practices, 3.5% of registered quarter horses and 28.3% of the cow horse population are heterozygote carriers. Research demonstrated homozygote horses develop hyperextensible skin susceptible to injury and other abnormal tissues containing high fibrillar collagen content. No research exists determining the effects of the disease in heterozygote carriers. Currently, 30% of cutting sires are HERDA carriers, potentially increasing t...
Brazilian Sport Horse: genetic parameters for approval of Brasileiro de Hipismo stallions.
Tropical animal health and production    December 19, 2019   Volume 52, Issue 4 1669-1680 doi: 10.1007/s11250-019-02168-7
Medeiros BR, Garbade P, Seixas L, Peripolli V, McManus C.The aim of this study was to evaluate genetic parameters for subjective scores given at the Brazilian Sport Horse (BSH) Stallion Approval by estimating heritability (h) for morphological, gait, and jumping traits and genetic correlations (γ) among the functional ones and by verifying selection feasibility. The analysis included 1179 complete evaluations from 294 horses, by 4.26 ± 0.96 judges. Each trait was evaluated using mixed models in SAS® v9.2, considering the individual as a random effect. Variance components and genetic parameters were obtained by single and two-trait animal mode...