Analyze Diet

Topic:Simulation

Simulation and horses involve the use of computational and virtual models to study and analyze equine behavior, physiology, and biomechanics. These simulations can replicate various scenarios, such as movement patterns, training regimens, and environmental interactions, to better understand horse dynamics and performance. Applications of equine simulations include optimizing training programs, improving rehabilitation strategies, and enhancing rider-horse communication. This page gathers peer-reviewed research studies and scholarly articles that explore the development, validation, and applications of simulation models in equine science.
Novel Intracardiac Ultrasound Images Developed on a Cardiac Ultrasound Simulator and Validated in Live Horses.
Journal of veterinary internal medicine    April 24, 2025   Volume 39, Issue 3 e70087 doi: 10.1111/jvim.70087
Vernemmen I, Demeyere M, Van Steenkiste G, Buschmann E, Decloedt A, van Loon G.Ultrasonographic guidance of catheter-based interventions in horses is based primarily on transthoracic echocardiography (TTE). Intracardiac echocardiography (ICE) has the potential to provide detailed imaging of specific cardiac regions. Insight and training in echocardiographic guidance can be acquired using an echocardiography simulator. Objective: Use an echocardiography simulator for horses to determine specific ICE views for catheter-based interventions and validate these in live horses. Methods: Six adult healthy experimental horses. Methods: Observational study. An echocardiographic ph...
Transoral snare removal of subepiglottic cysts.
Journal of the American Veterinary Medical Association    July 3, 2024   Volume 262, Issue 10 1-2 doi: 10.2460/javma.24.01.0061
Coutinho GH, Ragle CA.The objective of this demonstration was to describe and simulate a surgical technique for removing subepiglottic cysts in horses via an oral approach under endoscopic guidance using a cadaver model for simulation and clinical data. The technique aims to provide a minimally invasive method for the removal of these cysts. Methods: 2 clinical case images from the Washington State University Teaching Hospital were used in the video. In a third horse euthanized for reasons unrelated to the study, the procedure was simulated after the head was frozen and transected transversally. Methods: Files from...
Pharmacokinetics/pharmacodynamics cut-off determination for fosfomycin using Monte Carlo simulation in healthy horses.
The Journal of veterinary medical science    February 12, 2024   doi: 10.1292/jvms.23-0476
Kuroda T, Minamijima Y, Niwa H, Mita H, Tamura N, Fukuda K, Toutain PL, Ohta M.Fosfomycin (FOM) is an approved veterinary medicinal product for large animals in Japan, but Clinical breakpoint (CBP) for antimicrobial susceptibility test (AST) is not defined for animals. This study aimed at conducting a pharmacokinetics/pharmacodynamics (PK/PD) analysis to determine the PK/PD cutoff for the CBP in horses. Drug concentrations following single intravenous administration (IV) of 20 mg/kg body weight (BW) FOM in nine horses were measured using liquid chromatography/mass spectrometry. The data were modelled using a nonlinear mixed-effects model, followed by Monte Carlo simulati...
Water stabilizes an alternate turn conformation in horse heart myoglobin.
Scientific reports    April 13, 2023   Volume 13, Issue 1 6094 doi: 10.1038/s41598-023-32821-z
Bronstein A, Marx A.Comparison of myoglobin structures reveals that protein isolated from horse heart consistently adopts an alternate turn conformation in comparison to its homologues. Analysis of hundreds of high-resolution structures discounts crystallization conditions or the surrounding amino acid protein environment as explaining this difference, that is also not captured by the AlphaFold prediction. Rather, a water molecule is identified as stabilizing the conformation in the horse heart structure, which immediately reverts to the whale conformation in molecular dynamics simulations excluding that structur...
Evaluation of an Equine Nasogastric Intubation Model for Training Veterinary Students.
Journal of veterinary medical education    February 21, 2023   e20220127 doi: 10.3138/jvme-2022-0127
Prutton AM, Lenaghan HAH, Baillie S.Simulation in veterinary education is an important means of providing a safe, welfare-friendly way for students to hone their skills prior to performing procedures on live animals. Students may not get many chances to practice passing a nasogastric tube and checking for reflux in live horses during clinical rotations and extra-mural studies. A low-cost equine nasogastric intubation model was created at the University of Surrey, allowing students to practice passing a tube and checking for reflux. Thirty-two equine veterinarians evaluated the model for realism, and its potential usefulness in t...
Rational determination of cefazolin dosage regimen in horses based on pharmacokinetics/pharmacodynamics principles and Monte Carlo simulations.
Journal of veterinary pharmacology and therapeutics    October 17, 2022   Volume 46, Issue 1 62-67 doi: 10.1111/jvp.13099
Kuroda T, Minamijima Y, Mita H, Tamura N, Fukuda K, Kuwano A, Toutain PL, Sato F.A pharmacokinetics/pharmacodynamics (PK/PD) approach was used to determine the best empirical dosage regimen of cefazolin (CEZ) after intramuscular (IM) administration of CEZ in horses. Seven horses received a single IM or intravenous (IV) administration of CEZ of 5 mg/kg bodyweight (BW) according to a crossover design. CEZ plasma concentrations were measured using LC-MS/MS. The plasma concentrations in these seven horses and those of six other horses obtained in a previous study with an IV CEZ dose of 10 mg/kg were modelled simultaneously using NonLinear Mixed-Effect modelling followed by M...
A Computerized Simulation of the Occlusal Surface in Equine Cheek Teeth: A Simplified Model.
Frontiers in veterinary science    January 3, 2022   Volume 8 789133 doi: 10.3389/fvets.2021.789133
Sterkenburgh T, Schulz-Kornas E, Nowak M, Staszyk C.Equine mastication, as well as dental wear patterns, is highly important for the development of treatments in equine dentistry. During the last decades, the stress and strain distributions of equine teeth have been successfully simulated using finite element analysis. Yet, to date, there is no simulation available for dental tooth wear in equines. In this study, we developed a simplified two-dimensional computer simulation of dental wear. It provides a first tentative explanation for the development of the marked physiological inclination of the occlusal surface and for pathological conditions...
Medication control of flunixin in racing horses: Possible detection times using Monte Carlo simulations.
Equine veterinary journal    November 25, 2021   Volume 54, Issue 5 979-988 doi: 10.1111/evj.13532
Kuroda T, Minamijima Y, Nomura M, Yamashita S, Yamada M, Nagata S, Mita H, Tamura N, Fukuda K, Kuwano A, Kusano K, Toutain PL, Sato F.For medication control in several jurisdictions, withdrawal time is the period of refrain from racing after drug administration. It is set by adding a safety period to an experimental detection time. However, there are no reports of statistical analyses of detection time for the determination of withdrawal time in flunixin meglumine-treated horses. Objective: To analyse the population pharmacokinetics of flunixin in horses through the generation of a dataset for detection time statistical analysis and predictions via Monte Carlo simulation. Methods: Experimental study. Methods: Drug plasma and...
Computational insights into differential interaction of mammalian angiotensin-converting enzyme 2 with the SARS-CoV-2 spike receptor binding domain.
Computers in biology and medicine    November 3, 2021   Volume 141 105017 doi: 10.1016/j.compbiomed.2021.105017
Lupala CS, Kumar V, Su XD, Wu C, Liu H.The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the causative agent of the COVID-19 pandemic. Angiotensin-converting enzyme 2 (ACE2) has been identified as the host cell receptor that binds to the receptor-binding domain (RBD) of the SARS-COV-2 spike protein and mediates cell entry. Because the ACE2 proteins are widely available in mammals, it is important to investigate the interactions between the RBD and the ACE2 of other mammals. Here we analyzed the sequences of ACE2 proteins from 16 mammals, predicted the structures of ACE2-RBD complexes by homology modeling, and refi...
Design and Evaluation of a Novel Haptic Interface for Horse-Drawn Carriage Simulation.
IEEE transactions on haptics    September 9, 2021   Volume 14, Issue 3 491-502 doi: 10.1109/TOH.2021.3052151
Chardonnet JR, Ryard J, Secheppet M, Benezet C, Azema G, Leblanc S.Animal welfare has become an increasingly important concern in the sports field. Learning horse-drawn carriage driving requires much time and effort for both the drivers and the horses because the associated gestures to avoid harming the horses are difficult to acquire. This raises the need to develop realistic simulation environments for future drivers. To this end, two haptic interface prototypes were designed, coupled with dedicated simulation software. The first was developed based on a SPIDAR haptic device and implemented simple behaviors of the carriage. A user study demonstrated interes...
Impact of the event effect in genetic evaluation for ranking traits in horses.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie    September 8, 2021   Volume 139, Issue 1 13-25 doi: 10.1111/jbg.12645
Arias KD, Cervantes I, Gutiérrez JP.In genetic evaluation of horses, the genetic trend does not correspond into a phenotypic trend when using ranking as a phenotype due to its uniform distribution, and some other effects might be absorbing that trend. From a founder population, a further four discrete generations of 100 individuals were simulated under random mating. Then, ten additional discrete generations were simulated by selecting the best 10% of the animals. Likewise, an underlying variable with heritability 0.1 or 0.2, affected by an event environmental influence, generation and permanent environment, was simulated to est...
Kinetic disposition of diazepam and its metabolites after intravenous administration of diazepam in the horse: Relevance for doping control.
Journal of veterinary pharmacology and therapeutics    June 11, 2021   Volume 44, Issue 5 733-744 doi: 10.1111/jvp.12991
Schenk I, Machnik M, Broussou D, Meuly A, Roques BB, Lallemand E, Düe M, Röttgen H, Lagershausen H, Toutain PL, Thevis M.In horses, the benzodiazepine diazepam (DIA) is used as sedative for pre-medication or as an anxiolytic to facilitate horse examinations. As the sedative effects can also be abused for doping purposes, DIA is prohibited in equine sports. DIA is extensively metabolized to several active metabolites such as nordazepam, temazepam and oxazepam (OXA). For veterinarians, taking into account the detection times of DIA and its active metabolites is needed for minimizing the risk of an anti-doping rule violation. Therefore, a pharmacokinetic study on 6 horses was conducted using a single intravenous (...
Amiridine-piperazine hybrids as cholinesterase inhibitors and potential multitarget agents for Alzheimer’s disease treatment.
Bioorganic chemistry    May 21, 2021   Volume 112 104974 doi: 10.1016/j.bioorg.2021.104974
Makhaeva GF, Lushchekina SV, Kovaleva NV, Yu Astakhova T, Boltneva NP, Rudakova EV, Serebryakova OG, Proshin AN, Serkov IV, Trofimova TP, Tafeenko VA....We synthesized eleven new amiridine-piperazine hybrids 5a-j and 7 as potential multifunctional agents for Alzheimer's disease (AD) treatment by reacting N-chloroacetylamiridine with piperazines. The compounds displayed mixed-type reversible inhibition of acetylcholinesterase (AChE) and butyrylcholinesterase (BChE). Conjugates were moderate inhibitors of equine and human BChE with negligible fluctuation in anti-BChE activity, whereas anti-AChE activity was substantially dependent on N4-substitution of the piperazine ring. Compounds with para-substituted aromatic moieties (5g, 5h, and bis-amirid...
A deterministic simulation model for the evaluation of reproductive performance in Thoroughbred mares.
Theriogenology    December 11, 2020   Volume 161 237-242 doi: 10.1016/j.theriogenology.2020.12.012
Mure S, Oishi K, Hirooka H.The objective of the present study was to develop a deterministic simulation model for evaluating the reproductive performance of Thoroughbred mares. As an application, the model was used to estimate the herd level asymptotic foaling percentage (AFP) for evaluating the performance of mares in stabilized mare herds using the convergent method for estimating a steady-state distribution of mares. In this model, it was assumed that the mares were mated only during the breeding season. The effects of early pregnancy loss and fetal loss on reproductive performance were investigated. The sensitivitie...
Determination of the pharmacokinetic-pharmacodynamic cut-off values of marbofloxacin in horses to support the establishment of a clinical breakpoint for antimicrobial susceptibility testing.
Equine veterinary journal    December 4, 2020   Volume 53, Issue 5 1047-1055 doi: 10.1111/evj.13385
Bousquet-Mélou A, Schneider M, El Garch F, Broussou DC, Ferran AA, Lallemand EA, Triboulloy C, Damborg P, Toutain PL.Marbofloxacin (MBX), a fluoroquinolone (FQ), is considered as a critical antibiotic requiring antimicrobial susceptibility testing (AST) for prudent use. No clinical breakpoint (CBP) currently exists to interpret the results of such tests in horses. Objective: To compute PK/PD cut-offs (PK/PDCO ) that is one of the three minimum inhibitory concentrations (MICs) considered establishing a CBP for antimicrobial susceptibility test interpretation. Methods: A meta-analysis conducted by combining five sets of previously published pharmacokinetic data, obtained in clinical and nonclinical settings. M...
Evaluation of Structural Anisotropy in a Porous Titanium Medium Mimicking Trabecular Bone Structure Using Mode-Converted Ultrasonic Scattering.
IEEE transactions on ultrasonics, ferroelectrics, and frequency control    January 10, 2020   Volume 67, Issue 5 1017-1024 doi: 10.1109/TUFFC.2019.2963162
Du H, Yousefian O, Horn T, Muller M.The mode-converted (longitudinal to transverse, L-T) ultrasonic scattering method was utilized to characterize the structural anisotropy of a phantom mimicking the structural properties of trabecular bone. The sample was fabricated using metal additive manufacturing from high-resolution computed tomography (CT) images of a sample of trabecular horse bone with strong anisotropy. Two focused transducers were used to perform the L-T ultrasonic measurements. A normal incidence transducer was used to transmit longitudinal ultrasonic waves into the sample, while the scattered transverse signals were...
The neurocognitive gains of diagnostic reasoning training using simulated interactive veterinary cases.
Scientific reports    December 27, 2019   Volume 9, Issue 1 19878 doi: 10.1038/s41598-019-56404-z
Nassar M.The present longitudinal study ascertained training-associated transformations in the neural underpinnings of diagnostic reasoning, using a simulation game named "Equine Virtual Farm" (EVF). Twenty participants underwent structural, EVF/task-based and resting-state MRI and diffusion tensor imaging (DTI) before and after completing their training on diagnosing simulated veterinary cases. Comparing playing veterinarian versus seeing a colorful image across training sessions revealed the transition of brain activity from scientific creativity regions pre-training (left middle frontal and temporal...
Various 3D printed materials mimic bone ultrasonographically: 3D printed models of the equine cervical articular process joints as a simulator for ultrasound guided intra-articular injections.
PloS one    August 6, 2019   Volume 14, Issue 8 e0220332 doi: 10.1371/journal.pone.0220332
Beaulieu A, Linden AZ, Phillips J, Arroyo LG, Koenig J, Monteith G.In the equine racehorse industry, reduced athletic performance due to joint injury and lameness has been extensively reviewed. Intra-articular injections of glucocorticoids are routinely used to relieve pain and inflammation associated with osteoarthritis. Intra-articular injections of pharmaceutical agents require practice for precise needle placement and to minimize complications. Training on simulators or models is a viable alternative for developing these technical skills. The purpose of this study was to compare the qualitative ultrasonographic characteristics of three-dimensional (3D) pr...
Finite Element Modelling Simulated Meniscus Translocation and Deformation during Locomotion of the Equine Stifle.
Animals : an open access journal from MDPI    July 31, 2019   Volume 9, Issue 8 502 doi: 10.3390/ani9080502
Zellmann P, Ribitsch I, Handschuh S, Peham C.We developed a finite element model (FEM) of the equine stifle joint to identify pressure peaks and simulate translocation and deformation of the menisci. A series of sectional magnetic resonance images (1.5 T) of the stifle joint of a 23 year old Shetland pony gelding served as basis for image segmentation. Based on the 3D polygon models of femur, tibia, articular cartilages, menisci, collateral ligaments and the meniscotibial ligaments, an FEM model was generated. Tissue material properties were assigned based on data from human (Open knee(s) project) and bovine femoro-tibial joint available...
Face, construct, and concurrent validity of a simulation model for laparoscopic ovariectomy in standing horses.
Journal of the American Veterinary Medical Association    June 19, 2018   Volume 253, Issue 1 92-100 doi: 10.2460/javma.253.1.92
Elarbi MM, Ragle CA, Fransson BA, Farnsworth KD.OBJECTIVE To develop and validate a simulation model for laparoscopic ovariectomy in standing horses. DESIGN Prospective cohort study. SAMPLE 15 third-year veterinary students and 4 equine surgeons with experience in laparoscopy. PROCEDURES A simulation model that mimicked laparoscopic ovariectomy in standing horses was developed. Face validity of the model was determined with a questionnaire completed by the equine surgeons. Construct validity was determined by comparing performance scores (based on time to completion and accuracy completing various operative tasks) for simulated laparoscopic...
A comparison of methods for estimating substitution rates from ancient DNA sequence data.
BMC evolutionary biology    May 16, 2018   Volume 18, Issue 1 70 doi: 10.1186/s12862-018-1192-3
Tong KJ, Duchêne DA, Duchêne S, Geoghegan JL, Ho SYW.Phylogenetic analysis of DNA from modern and ancient samples allows the reconstruction of important demographic and evolutionary processes. A critical component of these analyses is the estimation of evolutionary rates, which can be calibrated using information about the ages of the samples. However, the reliability of these rate estimates can be negatively affected by among-lineage rate variation and non-random sampling. Using a simulation study, we compared the performance of three phylogenetic methods for inferring evolutionary rates from time-structured data sets: regression of root-to-tip...
Using a computer simulation model to examine the impact of biosecurity measures during a facility-level outbreak of equine influenza.
Canadian journal of veterinary research = Revue canadienne de recherche veterinaire    May 15, 2018   Volume 82, Issue 2 89-96 doi: 10.1016/j.vetmic.2013.03.029
Spence KL, O'Sullivan TL, Poljak Z, Greer AL.On-farm biosecurity measures are an important part of a control plan to minimize the introduction and spread of infectious diseases, such as equine influenza, in an equine facility. It can be challenging, however, to evaluate the efficacy of biosecurity measures under field conditions. We used an agent-based computer simulation model to describe the impact of: i) preventive vaccination; ii) reduced horse-to-horse contact; and iii) a combination of vaccination and reduced contact during an outbreak of equine influenza in a simulated horse facility. The model demonstrated that the most effective...
Estimating the potential for disease spread in horses associated with an equestrian show in Ontario, Canada using an agent-based model.
Preventive veterinary medicine    December 22, 2017   Volume 151 21-28 doi: 10.1016/j.prevetmed.2017.12.013
Spence KL, O'Sullivan TL, Poljak Z, Greer AL.Participation in equestrian shows provides opportunities for contact between horses, increasing the risk of disease introduction and spread within the population. The magnitude of a potential outbreak, and the impact of disease prevention and control strategies, can be estimated using simulation modeling. The objectives of this study were to (1) examine the potential spread of equine influenza in a network of horses associated with a 2-day equestrian show in Ontario, Canada; and (2) determine the effectiveness of several interventions during a simulated outbreak. A discrete-event, continuous-t...
Equine Exercise in Younger and Older Adults: Simulated Versus Real Horseback Riding.
Perceptual and motor skills    October 26, 2017   Volume 125, Issue 1 93-108 doi: 10.1177/0031512517736463
Kim MJ, Kim T, Oh S, Yoon B.Horseback riding is an effective exercise for improving postural control and balance. To reduce costs and improve accessibility, simulated horseback riding has been developed; but no differential effects of simulated and real horseback riding on muscle activation patterns in older adults have been studied. Thus, we compared muscle activation patterns for older and younger adults engaged in real and simulated horseback riding exercises, using surface electromyography recordings of the erector spinae, rectus abdominis, internal oblique abdominis, and rectus femoris muscles. We recorded muscle ac...
Modelling the effect of race surface and racehorse limb parameters on in silico fetlock motion and propensity for injury.
Equine veterinary journal    March 9, 2017   Volume 49, Issue 5 681-687 doi: 10.1111/evj.12672
Symons JE, Hawkins DA, Fyhrie DP, Upadhyaya SK, Stover SM.The metacarpophalangeal joint (fetlock) is the most commonly affected site of racehorse injury, with multiple observed pathologies consistent with extreme fetlock dorsiflexion. Race surface mechanics affect musculoskeletal structure loading and injury risk because surface forces applied to the hoof affect limb motions. Race surface mechanics are a function of controllable factors. Thus, race surface design has the potential to reduce the incidence of musculoskeletal injury through modulation of limb motions. However, the relationship between race surface mechanics and racehorse limb motions is...
A galloping quadruped model using left-right asymmetry in touchdown angles.
Journal of biomechanics    June 27, 2015   Volume 48, Issue 12 3383-3389 doi: 10.1016/j.jbiomech.2015.06.003
Tanase M, Ambe Y, Aoi S, Matsuno F.Among quadrupedal gaits, the galloping gait has specific characteristics in terms of locomotor behavior. In particular, it shows a left-right asymmetry in gait parameters such as touchdown angle and the relative phase of limb movements. In addition, asymmetric gait parameters show a characteristic dependence on locomotion speed. There are two types of galloping gaits in quadruped animals: the transverse gallop, often observed in horses; and the rotary gallop, often observed in dogs and cheetahs. These two gaits have different footfall sequences. Although these specific characteristics in quadr...
Biomechanical modelling of impact-related fracture characteristics and injury patterns of the cervical spine associated with riding accidents.
Clinical biomechanics (Bristol, Avon)    June 24, 2015   Volume 30, Issue 8 795-801 doi: 10.1016/j.clinbiomech.2015.06.011
Jauch SY, Wallstabe S, Sellenschloh K, Rundt D, Püschel K, Morlock MM, Meenen NM, Huber G.Horse-related injuries are manifold and can involve the upper and lower limbs, the trunk, spine or head. Cervical spine injuries are not among the most common injuries. However, they can be fatal and often result in neurological symptoms. This study investigated the influence of the posture of the cervical spine on the ultimate strength and the pattern of vertebrae failure with the aim to provide some guidance for protective clothing design. Methods: Eighteen human cervical spines, each divided into two specimens (three vertebrae each), were subjected to a simulator test designed to mimic a sp...
A comparison of methods for whole-genome QTL mapping using dense markers in four livestock species.
Genetics, selection, evolution : GSE    February 12, 2015   Volume 47, Issue 1 6 doi: 10.1186/s12711-015-0087-7
Legarra A, Croiseau P, Sanchez MP, Teyssèdre S, Sallé G, Allais S, Fritz S, Moreno CR, Ricard A, Elsen JM.With dense genotyping, many choices exist for methods to detect quantitative trait loci (QTL) in livestock populations. However, no across-species study has been conducted on the performance of different methods using real data. We compared three methods that correct for relatedness either implicitly or explicitly: linkage and linkage disequilibrium haplotype-based analysis (LDLA), efficient mixed-model association (EMMA) analysis, and Bayesian whole-genome regression (BayesC). We analyzed one chromosome in each of five datasets (dairy cattle, beef cattle, sheep, horses, and pigs) using real g...
Evaluating the Effectiveness of Strategies for the Control of Equine Influenza Virus in the New Zealand Equine Population.
Transboundary and emerging diseases    October 7, 2014   Volume 63, Issue 3 321-332 doi: 10.1111/tbed.12277
Rosanowski SM, Cogger N, Rogers CW, Stevenson MA.New Zealand has never experienced an equine influenza (EI) outbreak. The 2007 outbreak of EI in Australia showed that in a naïve population EI spreads rapidly and substantial efforts (in terms of movement restrictions, mass vaccination and post-vaccination surveillance) were required to achieve eradication. To control EI, it is essential that animal health authorities have well-defined strategies for containment, control and eradication in place before an incursion occurs. A spatially explicit stochastic simulation model, InterSpread Plus, was used to evaluate EI control strategies for the Ne...
Pharmacokinetics of danofloxacin and N-desmethyldanofloxacin in adult horses and their concentration in synovial fluid.
Journal of veterinary pharmacology and therapeutics    September 16, 2014   Volume 38, Issue 2 123-129 doi: 10.1111/jvp.12152
Lopez BS, Giguère S, Berghaus LJ, Mullins MA, Davis JL.The objectives of this study were to investigate the pharmacokinetics of danofloxacin and its metabolite N-desmethyldanofloxacin and to determine their concentrations in synovial fluid after administration by the intravenous, intramuscular or intragastric routes. Six adult mares received danofloxacin mesylate administered intravenously (i.v.) or intramuscularly (i.m.) at a dose of 5 mg/kg, or intragastrically (IG) at a dose of 7.5 mg/kg using a randomized Latin square design. Concentrations of danofloxacin and N-desmethyldanofloxacin were measured by UPLC-MS/MS. After i.v. administration, da...