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Topic:Breed Differences

Breed differences in horses encompass variations in physical characteristics, behavior, and physiological traits among different horse breeds. These differences arise from selective breeding practices aimed at enhancing specific attributes such as speed, endurance, strength, or temperament. Physical attributes can include variations in size, coat color, and conformation, while behavioral traits may involve differences in temperament and trainability. Physiological differences can affect metabolism, disease susceptibility, and performance capabilities. This topic includes peer-reviewed research studies and scholarly articles that explore the genetic, environmental, and historical factors contributing to breed differences, as well as their implications for equine management, health, and performance.
Quantitative modeling reveals prolonged lactate clearance in young and unraced Jeju horses following high-intensity exercise under passive recovery conditions.
American journal of veterinary research    August 6, 2025   1-9 doi: 10.2460/ajvr.25.02.0062
Sohn Y, An SJ, Forbes E, Yoon J, Kim BS, Kim JG, Ryu SH.To model lactate recovery kinetics in relation to sex, age, running speed, and racing experience, and to estimate blood lactate clearance time under passive recovery conditions that reflect current management practices in Jeju horses, a less well-characterized pony-sized indigenous breed. Unassigned: From October through December 2022, BLC was measured at baseline, 10 minutes after 800-m barrier trials (time [T]-1), and 50 minutes (T2) after 800-m barrier trials in 40 race-trained Jeju horses (2 to 4 years old). Lactate clearance was modeled using nonlinear regression with an exponential decay...
Variation in Four Horse Gait Categories Illustrated by Quantitative Analysis With ANALOC-E.
Veterinary medicine international    August 6, 2025   Volume 2025 4906015 doi: 10.1155/vmi/4906015
Staiger EA, Pereira de Toledo A, Rizzato Paschoal V, Patterson Rosa L.Horse gaits are a trait highly selected and prized in diverse breeds. Meanwhile, gait classification relies mostly on subjective visual observations by evaluators. Noninvasive equipment able to track locomotion in horses and output quantitative gait parameters is not only helpful in evaluating locomotion but also in designating gait types and its variations. Equine locomotion pattern designation based solely on observer evaluation can be subjective; therefore, utilizing tools that provide quantitative results and track individual limb movements, especially during intermediate-speed gaits, can ...
Population structure and signature of selection for body size in some Iranian and exotic horse breeds.
Journal of equine veterinary science    July 29, 2025   Volume 152 105658 doi: 10.1016/j.jevs.2025.105658
Bazvand B, Rashidi A, Zandi MB, Moradi MH, Rostamzadeh J, Mahmoudi P.Iran is home to genetically distinct horse breeds shaped by geography and history. Breeds like the Kurdish, Caspian pony, and Turkmen reflect deep-rooted diversity and unique adaptive traits. Objective: This study aimed to identify genomic regions exhibiting signatures of selection and to detect candidate genes and biological pathways related to body size that may influence performance in various Iranian and exotic horse breeds. Methods: Samples were collected from three Iranian native breeds (Caspian pony, Turkmen, and Kurdish) and three exotic breeds (Fell pony, Arabian, and Akhal-Teke) orig...
Reference Intervals for Biochemical Analytes in Clinically Healthy Adult Lusitano Horses.
Veterinary sciences    July 11, 2025   Volume 12, Issue 7 656 doi: 10.3390/vetsci12070656
Pires MJ, Cotovio M, Queiroga F, Pires CA, Silvestre-Ferreira AC.To date, serum biochemical analytes reference intervals (RIs) in Lusitano horses have not been studied. This study aimed to establish the RIs for biochemical analytes following the American Society of Veterinary Clinical Pathology guidelines and to compare them with the general equine population's RIs. Blood samples were collected from 76 clinically healthy adult Lusitano horses, and RIs of 22 biochemical variables were determined using Reference Value Advisor software. Lusitano horse-specific RIs are proposed for the following variables: total protein (3.9-7.0 g/dL), albumin (2.5-3.8 g/dL), g...
An iterative approach to identify key predictive features of fear reactivity and fearfulness in horses (Equus caballus).
Scientific reports    July 9, 2025   Volume 15, Issue 1 24590 doi: 10.1038/s41598-025-10725-4
Gobbo E, Topal O, Novalija I, Mladenić D, Zupan Šemrov M.This study extends previous findings by applying artificial intelligence (AI) methods to a larger dataset to identify key features that predict fear reactivity (i.e., immediate reaction to fear inducing stimuli) and fearfulness (i.e., a stable personality trait) in 101 Lipizzan horses. The analysis included 221 morphological, kinematic, behavioral and management measurements per horse. Previous findings were confirmed, as body and head size were identified as promising predictors of aspects of fear-related trait. Using an iterative AI approach, six key features for fear reactivity and nine for...
Epidemiological Patterns of Gastrointestinal Parasitic Infections in Equine Populations from Urumqi and Ili, Xinjiang, China.
Veterinary sciences    July 6, 2025   Volume 12, Issue 7 644 doi: 10.3390/vetsci12070644
Lu Y, Ru P, Qin S, Zhang Y, Fu E, Cai M, Tuohuti N, Wu H, Zhang Y, Zhang Y.Gastrointestinal parasitic diseases pose significant health risks to equine populations. This study investigated the epidemiological patterns of equine gastrointestinal parasites in Xinjiang by analyzing 83 fecal samples collected from Ili ( = 62) and Urumqi ( = 21) between August and November 2024. The modified McMaster technique was employed to quantify fecal egg counts (EPG) and was complemented by morphological identification to assess infection dynamics related to geography, breed specificity, and management practices. The results demonstrated an overall infection prevalence of 66.3% (55/...
Physiological response to weight carrying and associations with conformation traits in Icelandic horses used for tour riding.
Acta veterinaria Scandinavica    June 19, 2025   Volume 67, Issue 1 35 doi: 10.1186/s13028-025-00818-5
Söderroos D, Stefánsdóttir GJ, Ragnarsson S, Gunnarsson V, Jansson A.Weight carrying capacity is an important trait in riding horses and it may be associated with conformation. This study examined the physiological response to a ridden incremental weight carrying test in 16 adult Icelandic horses used for tour riding. Horses carried 20% (BWR20%), 25% (BWR25%), 30% (BWR30%) and 35% (BWR35%) of their body weight (BW) in tölt (~ 5.7 m/seconds, 640 m/step), and associations with body measurements and back conformation (score) were examined. Horses were divided into two groups (narrow or broad back) and body measurements were collected. Plasma lactate was analy...
The Effects of the Lactation Period, Mare Age, and Foaling on the Chemical and Physical Composition of Milk from Kazakh Mares Kept Under Natural Pasture Conditions.
Animals : an open access journal from MDPI    June 19, 2025   Volume 15, Issue 12 1817 doi: 10.3390/ani15121817
Toishimanov M, Zhanten O, Kanat R, Beishova I, Ulyanov V, Assanbayev T, Sharapatov T, Daurov D, Daurova A, Sapakhova Z, Nametov A, Shamekova M.This study aimed to evaluate the chemical composition of milk from Kazakh mares kept under free-grazing conditions on natural pasture without supplementary feeding. Fifty Kazakh mares were aged 3 to 13 years, kept in herds, and categorized by age, number of foalings, and lactation stage for statistical analysis. Milk samples were collected, chilled, and analyzed on the same day using a Milkoscan FT2. The composition of fat, protein, lactose, total solids, casein, and other components was examined. Statistical analyses, including ANOVA, PCA, CDA, and Pearson correlation analysis, were performed...
The Thoroughbred Theory: Influence of Breed on Performance at the CCI5*-L Level of Eventing.
Animals : an open access journal from MDPI    June 18, 2025   Volume 15, Issue 12 doi: 10.3390/ani15121796
Walz KR, McCormick ME, Fedorka CE.Breed bias exists within many of the top disciplines of equestrian sport. Therefore, the objective of this study was to evaluate the influence of breed on performance at the CCI5*-L level of eventing. To do so, the results of all CCI5*-L events from 2014 to 2024 were assessed. Initially, Thoroughbreds were compared to all non-Thoroughbreds, and this was followed by assessing the ten primary breeds. Data included penalties accrued in dressage, cross country, show jumping, and overall. Additionally, the likelihood of completing each phase was assessed. It was found that Thoroughbreds accrued mor...
Prevalence and risk of orthopedic diagnoses in insured Swedish Warmblood horses.
Preventive veterinary medicine    June 11, 2025   Volume 242 106596 doi: 10.1016/j.prevetmed.2025.106596
Bonow S, Hernlund E, Eriksson S, Strandberg E, Gelinder Viklund Å.Sweden has a strong tradition of insuring horses for veterinary costs, and orthopedic diagnoses are the most common for insurance claims. The aim of this study was to investigate differences in prevalence and risk of orthopedic diagnoses for Swedish warmblood (SWB) horses classified as jumping (J) or dressage (D) horses. Also, other factors that may influence orthopedic health were investigated, i.e., sex, birth cohort, and participation in young horse tests and competition. The data consisted of 15,619 insured SWB horses born between 2010 and 2020. Horses were classified as J or D horses acco...
Genetic relationship between Neck and Limb defects in Pura Raza Española Horses.
Journal of equine veterinary science    June 10, 2025   Volume 151 105630 doi: 10.1016/j.jevs.2025.105630
Ripollés-Lobo M, Perdomo-González DI, Dos Santos R, Sánchez-Guerrero MJ, Azor P, Valera M.Neck and limb conformational defects can impair functionality and performance in Pura Raza Española (PRE) horses. However, their potential genetic relationship has not been previously explored. Objective: To estimate the genetic correlations between two types of neck defects (Cresty neck -CN-, Ewe neck -EN-) and twelve conformational limb defects: Forelimb (Buck knee -BUK-, Calf knee -CK-, Bench knee -BEK-, Knock knee -KK-, Splay-footed forelimb -SFF-, Pigeon-toed forelimb -PTF-), rear limb (Closed hock -CH-, Open hock -OH-, Convergent hock -CVH-, Divergent hock -DVH-, Splay-footed rear limb ...
Retrospective five-year study of equine casuistry in a Colombian perinatology center.
Brazilian journal of veterinary medicine    May 30, 2025   Volume 47 e005824 doi: 10.29374/2527-2179.bjvm005824
Parra MT, Ayala MSF.A retrospective study was conducted at the Foal Care Equine Perinatology Center in Colombia from October 2017 to May 2023. The goal was to analyze the most frequent pathologies, as well as assess the sexes, ages, and breeds of the patients, with an emphasis on the perinatal population. Out of 945 clinical histories, 776 pertained to perinatology. Survival rates were calculated, and a descriptive analysis was performed. The overall survival rate for neonates was 73.6%, with females constituting 57% of the neonatal patients. The most prevalent breed among mares and neonates was the Creole Colomb...
Whole-Genome Resequencing Analysis of Copy Number Variations Associated with Athletic Performance in Grassland-Thoroughbred.
Animals : an open access journal from MDPI    May 18, 2025   Volume 15, Issue 10 1458 doi: 10.3390/ani15101458
Ding W, Gong W, Bou T, Shi L, Lin Y, Shi X, Li Z, Wu H, Dugarjaviin M, Bai D.Copy number variation (CNV) is an important source of genetic variation. However, studies utilizing whole-genome sequencing to investigate CNVs in horse populations and their effects on traits remain relatively limited. This study aims to address the lack of research on the impact of copy number variation (CNV) on racing performance in horse populations, providing new insights for locally bred racing breeds. We analyzed 60 offspring derived from the crossbreeding of Thoroughbred horses and Xilingol horses. These horses were temporarily named "Grassland-Thoroughbred" and were divided into two g...
Selection signatures and inbreeding: exploring genetic diversity in five native horse breeds.
BMC veterinary research    May 16, 2025   Volume 21, Issue 1 346 doi: 10.1186/s12917-025-04794-w
Asti V, Summer A, Ablondi M, Sartori C, Giontella A, Pilastro V, Mecocci S, Cappelli K, Mancin E, Oian A, Mantovani R, Capomaccio S, Sabbioni A.Horses have undergone extensive natural and artificial selection, shaping the diversity of breeds observed today. Native Italian breeds present unique traits influenced by natural selection, such as adaptation to harsh climates, or hoof strength, but face challenges due to population declines and the reduction of their original breeding purpose. This study focuses on five local Italian breeds: Bardigiano, Haflinger, Maremmano, Murgese, and Italian Heavy Draught Horse, to understand how selection has shaped their populations. A total of 1620 individuals were genotyped with a medium-density SNP ...
Analysis of Population Structure in Hungarian Coldblood Horses Based on Pedigree Information.
Animals : an open access journal from MDPI    May 13, 2025   Volume 15, Issue 10 1406 doi: 10.3390/ani15101406
Barsi B, Oláh J, Posta J.The Hungarian Coldblood horse was developed in the 1920s by crossing local mares with draft horses imported from Belgium and France, and was approved as an official horse breed in 1954. The aim of the study was to analyze the quality of the pedigree, generation interval, gene origin, and inbreeding. The pedigree information was received from the Hungarian Coldblood Horse Breeding Association. The studbook data of the registered animals up to 2023 were evaluated. Two reference populations were chosen: horses having offspring in 1989 and 2023. The final database contained 21,699 horses. Pedigree...
Allele Frequencies and Genotypes for the Ryanodine Receptor 1 Variant Causing Malignant Hyperthermia and Fatal Rhabdomyolysis With Hyperthermia in Horses.
Journal of veterinary internal medicine    April 29, 2025   Volume 39, Issue 3 e70081 doi: 10.1111/jvim.70081
Aleman M, McCue M, Bellone RR.Fatal anesthesia-induced malignant hyperthermia (MH) and rhabdomyolysis with hyperthermia documented in Quarter Horses (QH) breeds are caused by a missense variant in the ryanodine receptor 1 gene (RYR1: XP_023505430.1.:p.(R2454G), designated as MH). The reported cases to date have all been heterozygous, and the allele frequency is suspected to be low. Objective: To determine an accurate estimate of MH allele frequency in multiple horse breeds and investigate whether homozygous animals exist in the population. Methods: In total, 159 227 horses from 16 breeds who were either submitted for cli...
Prediction of Gestational Age in Warmblood, Standardbred and Thoroughbred Horses Based on the Table Established in Light Breed Horses Using Foetal Ultrasonographic Measurements of Four Biometric Parameters.
Reproduction in domestic animals = Zuchthygiene    April 25, 2025   Volume 60, Issue 4 e70059 doi: 10.1111/rda.70059
Renaudin CD, Picandet V, Kass PH.Using the equation of Hartwig et al. and the table established for light breed horses, day of gestation was predicted in 108 Warmblood (WB) and 59 racehorses (Thoroughbred [TB] and Standardbred [STB]) pregnant mares. In WB, gestational ages were predicted within 2 weeks from 100 to 200 days of gestation using biparietal diameter (BPD), aortic diameter (AortD) or femur length (FL); within 2 weeks from 100 to 250 days using BPD or AortD; within 2 weeks from 100 to 300 days using BPD alone; and within 3 weeks from 100 to 350 days using eye approximated volume (EyV) alone. In the ...
Lipidomics and biochemical profiling of adult Yili horses in a 26 km endurance race: exploring metabolic adaptations.
Frontiers in veterinary science    April 22, 2025   Volume 12 1597739 doi: 10.3389/fvets.2025.1597739
Chang X, Zhang Z, Yao X, Meng J, Ren W, Zeng Y.The equine lipid metabolism is activated during and after endurance exercise to provide energy in response to the metabolic and physiological changes in the body caused by prolonged exercise; however, the specific regulatory mechanisms remain controversial and identifying differential lipid metabolites associated with equine endurance is essential to elucidate these regulatory mechanisms. In this study, blood samples for lipid metabolomic analysis and biochemical indices were collected before and after a 26 km race from 12 Yili horses with different endurance performance. The biochemical res...
Computed tomographic measurements in 110 front hooves of non-lame Thoroughbred racehorses and Warmblood showjumpers.
Equine veterinary journal    April 15, 2025   Volume 57, Issue 5 1328-1340 doi: 10.1111/evj.14509
Szabó L, Pollard D, Nagy A.There are no published reference ranges on computed tomographic (CT) hoof wall and sole measurements. Objective: To establish reference ranges for CT measurements of the hoof wall and sole in non-lame horses, and to investigate associations between measurements and signalment, laterality, and medial or lateral sides. Methods: Retrospective, cross-sectional study. Methods: Soft tissue reconstructions of fan-beam CT studies of 110 front feet of 56 non-lame horses (30 Thoroughbred racehorses, 26 Warmblood showjumpers), performed in non- to semi-weightbearing positions, were analysed. Hoof wall th...
Characteristics and dynamic changes of gut microbiota in Mongolian horses and Guizhou horses.
Frontiers in microbiology    April 15, 2025   Volume 16 1582821 doi: 10.3389/fmicb.2025.1582821
Li Y, Lan Y.The gut microbial importance and its crucial roles in host digestion, immunity, and metabolism have received widely attention. Horses, especially indigenous varieties such as Mongolian horses (MGH) and Guizhou horses (GZH), have not received sufficient attention, and the characteristics of their gut microbiota are still unclear. For this purpose, we collected faecal samples from eight MGH and eight GZH to compare their gut microbial differences using amplicon sequencing. The results of alpha diversity analysis indicated that the gut bacterial diversity and gut fungal abundance in GZH were sign...
Pilot Study on the Profiling and Functional Analysis of mRNA, miRNA, and lncRNA in the Skeletal Muscle of Mongolian Horses, Xilingol Horses, and Grassland-Thoroughbreds.
Animals : an open access journal from MDPI    April 13, 2025   Volume 15, Issue 8 doi: 10.3390/ani15081123
Ding W, Gong W, Bou T, Shi L, Lin Y, Wu H, Dugarjaviin M, Bai D.Muscle fibers, as the fundamental units of muscle tissue, play a crucial role in determining skeletal muscle function through their growth, development, and composition. To investigate changes in muscle fiber types and their regulatory mechanisms in Mongolian horses (MG), Xilingol horses (XL), and Grassland-Thoroughbreds (CY), we conducted histological and bioinformatic analyses on the gluteus medius muscle of these three horse breeds. Immunofluorescence analysis revealed that Grassland-Thoroughbreds had the highest proportion of fast-twitch muscle fibers at 78.63%, while Mongolian horses had ...
Investigating the interplay of stressors and health in horses through fecal cortisol metabolite analysis.
Frontiers in veterinary science    April 8, 2025   Volume 12 1545577 doi: 10.3389/fvets.2025.1545577
Nowak AC, Macho-Maschler S, Biermann NM, Palme R, Dengler F.Horses are highly sensitive to stress, which can affect their wellbeing and lead to various health issues. Effective and objective stress assessment is therefore crucial for improving their care and management. The production of the glucocorticoid cortisol is increased in response to stressful stimuli and its metabolites can be measured non-invasively in feces. Therefore, this study aimed to explore the impact of different environmental and physiological stressors on fecal cortisol metabolite (FCM) concentrations in horses, with a particular focus on the relationship between stress, health, an...
Genetic characteristics of local horse breeds by microsatellite DNA loci.
Vavilovskii zhurnal genetiki i selektsii    March 27, 2025   Volume 29, Issue 1 113-121 doi: 10.18699/vjgb-25-13
Blohina NV, Khrabrova LA.Russia has a significant pedigree diversity of horse breeds with unique gene pools that are well adapted to a wide variety of harsh natural and climatic conditions, are characterized by universal performance and high productive qualities, and are of significant interest to the world horse breeding. Genetic studies of population diversity in horse breeding are very relevant, since many domestic horse breeds are under threat of extinction. Biomaterials (hair, blood, semen) from horses of 15 local breeds bred in the Russian Federation and neighboring countries (CIS) were selected for the research...
Genomic insights into the genetic diversity and genetic basis of body height in endangered Chinese Ningqiang ponies.
BMC genomics    March 24, 2025   Volume 26, Issue 1 292 doi: 10.1186/s12864-025-11484-2
Han J, Shao H, Sun M, Gao F, Hu Q, Yang G, Jafari H, Li N, Dang R.Genetic diversity in livestock and poultry is critical for adapting production systems to future challenges. However, inadequate management practices, particularly in developing countries, have led to the extinction or near extinction of several species. Understanding the genetic composition and historical background of local breeds is essential for their effective conservation and sustainable use. This study compared the genomes of 30 newly sequenced Ningqiang ponies with those of 56 other ponies and 104 horses to investigate genetic diversity, genetic differentiation, and the genetic basis o...
A Systematic Literature Review of Mitochondrial DNA Analysis for Horse Genetic Diversity.
Animals : an open access journal from MDPI    March 20, 2025   Volume 15, Issue 6 885 doi: 10.3390/ani15060885
Agbani A, Aminou O, Machmoum M, Germot A, Badaoui B, Petit D, Piro M.This Systematic Literature Review (SLR) consolidates current research on mitochondrial DNA (mtDNA) analysis in horses, focusing on genetic variation, maternal lineage tracing, and haplogroup identification. The article selection process screened 1380 articles, with 76 fulfilling the inclusion criteria. Data extraction covered sampling techniques, studied mtDNA regions, sequencing methods, and haplogroup identification. Following the methodology of the PRISMA guidelines, this review encompasses studies published since 2012, obtained from Scopus, PubMed, Research4Life, Web of Science, and Scienc...
Domestic Quarter Horse (Equus caballus) Milk Macronutrient Composition Analyses Within Micro Quantities from Two Different Geographical Locations.
Animals : an open access journal from MDPI    March 19, 2025   Volume 15, Issue 6 882 doi: 10.3390/ani15060882
Wagner JCP, Edwards M, Trivedi S, Minter LJ, Ange-van Heugten K.Microquantity laboratory procedures (<5 mL) are often used to analyze milk from non-bovid or less common species due to limited available samples and small sample sizes, unlike the large quantities of milk needed for macroquantity (~20 mL) assays standard in the commercial dairy industry. To better understand microquantity milk laboratory analyses, quarter horse () milk from North Carolina State University (females = 4, n = 43) and California Polytechnic State University (females = 4, n = 42) equine centers was compared to investigate differences in macronutrient composition from 4 to 130 d...
Exploration of the Differential Expression Patterns of Immunoglobulin Heavy Chain Genes in Horses and Donkeys.
Developmental and comparative immunology    March 18, 2025   105360 doi: 10.1016/j.dci.2025.105360
Qiu Y, Jiang J, Yi X, Wang S, Sun X.This study investigated the immunoglobulins (IG) gene locus structure and expression diversity in local Chinese horse and donkey breeds, including Ningqiang, Guanzhong horses, and varieties such as Guanzhong, Jiami, and Northern Shaanxi donkey using genome alignment and high-throughput sequencing. The aim was to expand understanding of IG expression patterns in horses, donkeys, and their different breeds. The results revealed that the donkey IGH locus contains 117 VH genes (23 functional), 44 DH genes, and 8 JH genes, arranged in a VH-DH-JH sequence on chromosome 7, spanning approximately 1189...
A retrospective survey of equine ocular diseases evaluated at a referral hospital in Ontario (2011 to 2021).
The Canadian veterinary journal = La revue veterinaire canadienne    March 12, 2025   Volume 66, Issue 3 308-317 
Ing ST, Pinard CL, James-Jenks EM, Leis ML.Our objective was to investigate the demographics and prevalence of ocular disease in a large referral population of horses in Ontario over a 10-year period. Unassigned: A retrospective analysis of medical records for 283 horses evaluated by Board-certified veterinary ophthalmologists at the Ontario Veterinary College (Guelph, Ontario) was conducted. Signalment and ocular disease were recorded. Unassigned: The 3 most common ocular abnormalities identified were uveitis (43.7%, 123 horses), ulcerative keratitis (42.0%, 119 horses), and cataract (25.1%, 71 horses). Uveitis was most often secondar...
Microbiome analysis reveals dynamic changes of gut microbiota in Guizhou horse and Dutch Warmblood horses.
Frontiers in microbiology    March 12, 2025   Volume 16 1562482 doi: 10.3389/fmicb.2025.1562482
Lan Y, Li Y, Wang Y.In recent years, the importance of gut microbiota in digestive absorption, metabolism, and immunity has garnered increasing attention. China possess abundant horse breed resources, particularly Guizhou horses, which play vital roles in local agriculture, tourism, and transportation. Despite this, there is a lack of comparative studies on the gut microbiota of native Guizhou horses (GZH) and imported Dutch Warmblood horses (WH). To address this gap, fecal samples were collected from both GZH and WH, and 16S rRNA high-throughput sequencing was utilized to analyze the differences in their gut mic...
Genomic Patterns of Homozygosity and Genetic Diversity in the Rhenish German Draught Horse.
Genes    March 11, 2025   Volume 16, Issue 3 327 doi: 10.3390/genes16030327
Sievers J, Distl O.The Rhenish German draught horse is an endangered German horse breed, originally used as working horse in agriculture. Therefore, the objective of this study was to evaluate the breed's genetic diversity using pedigree and genomic data in order to analyze classical and ancestral pedigree-based inbreeding, runs of homozygosity, ROH islands, and consensus ROH. Methods: We studied the genome-wide genotype data of 675 Rhenish German draught horses and collated pedigree-based inbreeding coefficients for these horses. The final dataset contained 64,737 autosomal SNPs. Results: The average number of ...
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